FC920599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920599 vs. ExPASy Swiss-Prot
Match: RS6_ASHGO (40S ribosomal protein S6 OS=Ashbya gossypii GN=RPS6 PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.929e-51 Identity = 106/199 (53.27%), Postives = 135/199 (67.84%), Query Frame = 3 Query: 78 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEK 674 MK NI+ P G QK +E+DD+ ++R F+DKRI QEV+G+A+G+EFKGYVFKI GG DKQGFPMKQGVL P RV+LL+ +GT C+ IV PDL+VL L+I KKG+ ++ G+T+ P+ GPKRA+ IRK F L+K+DDVR +V R K K +KAPKIQRLVTP LQRKR + A K Sbjct: 1 MKLNISYPVNGTQKTIEVDDEHRVRVFYDKRIGQEVNGEAVGDEFKGYVFKIAGGNDKQGFPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGDQEIEGITNESVPKRLGPKRANNIRKFFGLTKDDDVRDFV---IRREVVKGDKTYTKAPKIQRLVTPQRLQRKRHQRALK 194
BLAST of FC920599 vs. ExPASy Swiss-Prot
Match: RS6_DICDI (40S ribosomal protein S6 OS=Dictyostelium discoideum GN=rps6 PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.042e-48 Identity = 107/202 (52.97%), Postives = 129/202 (63.86%), Query Frame = 3 Query: 78 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKKQR 683 MK NIA P G QKK+ I+D K+R F +KRI QEV LG+EFKGYVFKI GG D +GFPM QGV P RVRLLL + CF CIV+ D++ L L+IVKKG+ ++PGLTD P +GPKRAS IRKLF LSK++DVR +V R T K SKAPKIQRLVTP T+ R++A A+K R Sbjct: 1 MKLNIAYPVNGSQKKINIEDKNKVRCFMEKRIGQEVEATTLGDEFKGYVFKITGGNDTEGFPMMQGVGAPTRVRLLLDGRSGCF--KPSRDGERKRKSVRGCIVAEDIASLQLIIVKKGDAEIPGLTDVSFPASKGPKRASNIRKLFKLSKDEDVRSFV-IRRELPATDKRKAKSKAPKIQRLVTPTTVARRKALRAKKAAR 199
BLAST of FC920599 vs. ExPASy Swiss-Prot
Match: RS6_LEIMA (40S ribosomal protein S6 OS=Leishmania major GN=RPS6 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.508e-39 Identity = 97/213 (45.54%), Postives = 124/213 (58.22%), Query Frame = 3 Query: 78 MKFNIANPTTGCQKKLEIDDDQKLRAFF-DKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVS-KAPKIQRLVTPLTLQR--KRARIAEKKQRIARPKQR 704 MK NIA P G K+ EI D+ R D R+ EV G G EFKGY+F++ GG DK GFPM GVL RV LL+ RG F C+++ D++++N+ I K G+ + G+TDT PR GPKRASKIRKLFNLS+ +DVRKYV R K+GKK KAPKIQRL+TP R K+A+ A K R + ++R Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRR---VVKSGKKDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERR 210
BLAST of FC920599 vs. ExPASy Swiss-Prot
Match: RS6_LEIIN (40S ribosomal protein S6 OS=Leishmania infantum GN=RPS6 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.773e-39 Identity = 96/213 (45.07%), Postives = 123/213 (57.75%), Query Frame = 3 Query: 78 MKFNIANPTTGCQKKLEIDDDQKLRAFF-DKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVS-KAPKIQRLVTPLTLQR--KRARIAEKKQRIARPKQR 704 M NIA P G K+ EI D+ R D R+ EV G G EFKGY+F++ GG DK GFPM GVL RV LL+ RG F C+++ D++++N+ I K G+ + G+TDT PR GPKRASKIRKLFNLS+ +DVRKYV R K+GKK KAPKIQRL+TP R K+A+ A K R + ++R Sbjct: 1 MYLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRR---VVKSGKKDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERR 210
BLAST of FC920599 vs. ExPASy Swiss-Prot
Match: RS6_ENCCU (40S ribosomal protein S6 OS=Encephalitozoon cuniculi GN=RPS6 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.510e-18 Identity = 60/199 (30.15%), Postives = 101/199 (50.75%), Query Frame = 3 Query: 126 EIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNL-SKEDDVRKYVNTYRRT---------FTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKKQRIAR 692 EI+ ++R +DK+I + G LGEEF+G + +I GG D QGFPM G LT RVR LL +G + IVS ++ VLNL+I++ GE ++ GLT+ P++ K+RK+F + +E +V Y+ ++ GK++ + + + + + L+RKR E+K+ + + Sbjct: 3 EIERRNEVR-LYDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPLLSKGDAGY--RCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKMFGVPDEEKNVVGYIRNILKSECDDPKKIPKIRHNGKRMKREQERREQIMKIRLERKRILEEERKEYLEK 198 The following BLAST results are available for this feature:
BLAST of FC920599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920599 ID=FC920599; Name=FC920599; organism=Citrus clementina; type=EST; length=713bpback to top |