FC920600

Overview
NameFC920600
Unique NameFC920600
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length644
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15512 contig Ccv1_Contig15512:5..648. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.779e-52
Identity = 103/168 (61.31%), Postives = 130/168 (77.38%), Query Frame = 1
Query:  148 SLVVLAIVFFGGL--FAISIAKEEAT---KLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            ++  L +VF   L  F  + A++E +     GTVIGIDLGTTYSCVGV +NG VEI+ NDQGNRITPS+VAFTD ERL+G+AAKNQ A NP RTIFD+KRLIGRKF+DK+VQ+D K  PYK+VN+DGKP+++V +     K  +PEE+SAM+L KMKE AE +LGKK+
Sbjct:   18 TIFYLLLVFIAPLAFFGTAHAQDETSPQESYGTVIGIDLGTTYSCVGVMQNGKVEILVNDQGNRITPSYVAFTDEERLVGDAAKNQYAANPRRTIFDIKRLIGRKFDDKDVQKDAKHFPYKVVNKDGKPHVKVDVNQ-TPKTLTPEEVSAMVLGKMKEIAEGYLGKKV 184          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.779e-52
Identity = 103/168 (61.31%), Postives = 130/168 (77.38%), Query Frame = 1
Query:  148 SLVVLAIVFFGGL--FAISIAKEEAT---KLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            ++  L +VF   L  F  + A++E +     GTVIGIDLGTTYSCVGV +NG VEI+ NDQGNRITPS+VAFTD ERL+G+AAKNQ A NP RTIFD+KRLIGRKF+DK+VQ+D K  PYK+VN+DGKP+++V +     K  +PEE+SAM+L KMKE AE +LGKK+
Sbjct:   18 TIFYLLLVFIAPLAFFGTAHAQDETSPQESYGTVIGIDLGTTYSCVGVMQNGKVEILVNDQGNRITPSYVAFTDEERLVGDAAKNQYAANPRRTIFDIKRLIGRKFDDKDVQKDAKHFPYKVVNKDGKPHVKVDVNQ-TPKTLTPEEVSAMVLGKMKEIAEGYLGKKV 184          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.935e-52
Identity = 97/137 (70.80%), Postives = 116/137 (84.67%), Query Frame = 1
Query:  226 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            G  IGIDLGTTYSCVGV++NG VEIIANDQGNR TPS+VAFTDSERLIG+AAKNQ A+NP  TIFD KRLIGR+F D  +Q DMK  P++++N+DGKP +Q +   GETK  SPEE+S+M+LTKMKETAEA+LGKK+
Sbjct:    4 GPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFNDSSIQADMKHWPFRVINKDGKPMLQAEYM-GETKTLSPEEVSSMVLTKMKETAEAYLGKKV 139          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: GRP78_CANGA (78 kDa glucose-regulated protein homolog OS=Candida glabrata GN=KAR2 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.418e-52
Identity = 101/161 (62.73%), Postives = 126/161 (78.26%), Query Frame = 1
Query:  169 VFFGGLFAISI-----AKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            +F   LF + +     AK++    GTVIGIDLGTTYSCV V KNG  EI+AN+QGNRITPS+VAFTD ERLIG+AAKNQ A NP  TIFD+KRLIG KF D+ VQRD+K  P+K+V++DGKP +QV+++ GE +VF+PEEIS MIL KMK+ AE +LGKK+
Sbjct:   12 LFLYALFVVLLPFQARAKDDVENYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQIAANPTNTIFDIKRLIGLKFNDRSVQRDIKHLPFKVVDKDGKPVVQVKVK-GEDRVFTPEEISGMILGKMKQIAEDYLGKKV 171          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 1.875e-51
Identity = 101/137 (73.72%), Postives = 119/137 (86.86%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDG-KPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 642
            IGIDLGTTYSCVGV++N  VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF DKEVQ DMK  P+K++ +DG KP+IQV+ + GETKVFSPEEIS+M+L KMKETAEA+LGK I +
Sbjct:    4 IGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDKEVQSDMKHWPFKVIPKDGDKPHIQVEFK-GETKVFSPEEISSMVLLKMKETAEAYLGKTINN 139          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 199.134 bits (505), Expect = 1.588e-50
Identity = 96/136 (70.59%), Postives = 116/136 (85.29%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 642
            IGIDLGTTYSCVG + N  VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  TIFD KRLIGRKF+D EVQ DMK  P+K++++DGKP +QV+ + GETK F+PEEIS+M+L KM+ETAEA+LG K+ D
Sbjct:    5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYK-GETKTFTPEEISSMVLMKMRETAEAYLGGKVTD 139          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 3.537e-50
Identity = 95/140 (67.86%), Postives = 118/140 (84.29%), Query Frame = 1
Query:  223 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 642
            +   +GIDLGTTYSCV  + N  VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQAA+NP  T+FD KRLIGRKF+D EVQ D+K  P+K+V + GKP+IQV+ + GETKVF+PEEIS+M+LTKMKETAE+++G K+ D
Sbjct:    1 MSKAVGIDLGTTYSCVAHFVNDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVQNDIKHFPFKVVEKGGKPHIQVEFK-GETKVFTPEEISSMVLTKMKETAESYMGGKVTD 139          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 4.619e-50
Identity = 96/136 (70.59%), Postives = 114/136 (83.82%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKD 642
            IGIDLGTTYSCVG + N  VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  TIFD KRLIGR+F D EVQ DMK  P+K++ +DGKP IQV+ + GETK F+PEEIS+M+L KM+E+AEAFLG K+ D
Sbjct:    5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFK-GETKTFTPEEISSMVLLKMRESAEAFLGGKVTD 139          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.033e-50
Identity = 96/138 (69.57%), Postives = 116/138 (84.06%), Query Frame = 1
Query:  226 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIK 639
            G  IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  TIFD KRLIGRK++D  VQ DMK  P+++VN  GKP +QV+ + GE K F PEEIS+M+LTKMKE AEA+LGKK++
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKYDDPTVQSDMKHWPFRVVNEGGKPKVQVEYK-GEMKTFFPEEISSMVLTKMKEIAEAYLGKKVE 141          
BLAST of FC920600 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.033e-50
Identity = 97/138 (70.29%), Postives = 113/138 (81.88%), Query Frame = 1
Query:  214 ATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 627
            A   GT IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMKL P++++N  GKP + V  + GE K F PEEIS+M+LTKMKETAEAFLG
Sbjct:    2 AAAKGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEGGKPKVMVSYK-GEKKAFYPEEISSMVLTKMKETAEAFLG 138          
The following BLAST results are available for this feature:
BLAST of FC920600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_ASPKA3.779e-5261.3178 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPAW3.779e-5261.3178 kDa glucose-regulated protein homolog OS=Asperg... [more]
HSP74_PARLI4.935e-5270.80Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
GRP78_CANGA8.418e-5262.7378 kDa glucose-regulated protein homolog OS=Candid... [more]
HS7C1_DICDI1.875e-5173.72Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HSP72_SCHPO1.588e-5070.59Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP71_PICAN3.537e-5067.86Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP71_SCHPO4.619e-5070.59Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP70_CHICK6.033e-5069.57Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HS71L_PIG6.033e-5070.29Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32010E11EF RVDevelop1 Citrus clementina cDNA clone C32010E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920600 ID=FC920600; Name=FC920600; organism=Citrus clementina; type=EST; length=644bp
GGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACACACTTCAAACATCGAA
ACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGGAGTTTGAAGCAGGGTA
TAATTGCTGCAGTACGCGCGATGGCTGGCTCGTGGAGAGCACGCGGGTCC
CTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTCTTTTTGCAATTTCAAT
TGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTGATTGGGATAGATCTTG
GTACAACTTATTCTTGTGTTGGTGTTTACAAGAATGGTCATGTCGAAATC
ATAGCCAATGATCAAGGAAACCGTATTACTCCATCATGGGTTGCATTCAC
TGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAGAATCAGGCTGCTGTCA
ATCCTGACAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAAGTTT
GAGGACAAGGAGGTTCAGAGGGACATGAAGCTTGCTCCTTACAAGATTGT
GAATAGGGATGGAAAGCCTTATATTCAGGTTCAGATTAGGGACGGCGAGA
CCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTATGATACTGACTAAGATG
AAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAATTAAGGATGC
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