FC920628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: AB18B_ARATH (ABC transporter B family member 18 OS=Arabidopsis thaliana GN=ABCB18 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.770e-22 Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTH--SQVIGMTSGSSSS 316 A ++ I+LLDEATSALD+ESER VQEALD A G+TTIV+AHRLSTIRNA VI V+ +G++ E GSH LL+ DG Y +++LQ+ + S I + G +SS Sbjct: 499 AIIKSPIILLLDEATSALDSESERVVQEALDNASIGRTTIVIAHRLSTIRNADVICVVHNGRIIETGSHEELLE-KLDGQYTSLVRLQQVDNKESDHISVEEGQASS 604 HSP 2 Score: 95.1301 bits (235), Expect = 1.680e-19 Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQR 268 A ++ ++LLDEATSALD++SE VQ+AL+R G+T++V+AHRLSTI+ IAV+++G V E G+HS LL P G Y ++ LQR Sbjct: 1134 AVLKNPSVLLLDEATSALDSQSESVVQDALERLMVGRTSVVIAHRLSTIQKCDTIAVLENGAVVECGNHSSLLAKGPKGAYFSLVSLQR 1222
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: AB12B_ARATH (ABC transporter B family member 12 OS=Arabidopsis thaliana GN=ABCB12 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 3.617e-22 Identity = 58/106 (54.72%), Postives = 75/106 (70.75%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT---HSQVIGMTSGSS 310 A ++ ++LLDEATSALD ESER VQEALDR +TT+VVAHRLST+RNA +IAVI GK+ E GSHS LLK++ G Y+++I+ Q ++ M SGSS Sbjct: 520 AILKDPRVLLLDEATSALDTESERVVQEALDRVMVNRTTVVVAHRLSTVRNADMIAVIHSGKMVEKGSHSELLKDSV-GAYSQLIRCQEINKGHDAKPSDMASGSS 624 HSP 2 Score: 100.138 bits (248), Expect = 5.223e-21 Identity = 52/87 (59.77%), Postives = 69/87 (79.31%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 262 A V++ +I+LLDEATSALDAESER VQ+ALDR +TT+VVAHRLSTI+NA VIA++ +G +AE G+H L+K + G YA ++QL Sbjct: 1182 AIVKEPKILLLDEATSALDAESERLVQDALDRVIVNRTTVVVAHRLSTIKNADVIAIVKNGVIAENGTHETLIKID-GGVYASLVQL 1267
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MDR3_CAEEL (Multidrug resistance protein 3 OS=Caenorhabditis elegans GN=pgp-3 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 6.170e-22 Identity = 53/94 (56.38%), Postives = 67/94 (71.28%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQ 283 A VRK +I+LLDEATSALD ESER VQ ALD+A G+TT+ +AHRLSTIRNA I V D G +AE G+H L+ + DG YA M++ Q ++ Sbjct: 528 AIVRKPQILLLDEATSALDTESERMVQTALDKASEGRTTLCIAHRLSTIRNASKILVFDQGLIAERGTHDELISKD-DGIYASMVKAQEIERAK 620 HSP 2 Score: 89.3521 bits (220), Expect = 9.220e-18 Identity = 49/88 (55.68%), Postives = 62/88 (70.45%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A VR +I+LLDEATSALD ESE+ VQEALD+A G+T +V+AHRLSTI+NA I V +GK E G+H LL G Y R+++ Q Sbjct: 1181 AIVRDPKILLLDEATSALDTESEKIVQEALDKARLGRTCVVIAHRLSTIQNADKIIVCRNGKAIEEGTHQTLLARR--GLYYRLVEKQ 1266
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MDR2_MOUSE (Multidrug resistance protein 2 OS=Mus musculus GN=Abcb4 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.170e-22 Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A VR +I+LLDEATSALD ESE VQ ALD+A G+TTIV+AHRLSTIRNA VIA +DG + E GSHS L+K +G Y R++ +Q Sbjct: 543 ALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTIRNADVIAGFEDGVIVEQGSHSELMKK--EGIYFRLVNMQ 628 HSP 2 Score: 97.8265 bits (242), Expect = 2.592e-20 Identity = 51/93 (54.84%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHS 280 A +R+ ++LLDEATSALD ESE+ VQEALD+A G+T IV+AHRLSTI+NA +I VI++GKV E G+H LL G Y M+ +Q T + Sbjct: 1185 ALIRQPRVLLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIENGKVKEHGTHQQLLAQK--GIYFSMVNIQAGTQN 1275
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MDR2_RAT (Multidrug resistance protein 2 OS=Rattus norvegicus GN=Abcb4 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.059e-22 Identity = 53/88 (60.23%), Postives = 66/88 (75.00%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A VR +I+LLDEATSALD ESE VQ ALD+A G+TTIV+AHRLST+RNA VIA +DG + E GSHS L+K +G Y R++ +Q Sbjct: 543 ALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFEDGVIVEQGSHSELIKK--EGIYFRLVNMQ 628 HSP 2 Score: 99.3673 bits (246), Expect = 8.910e-21 Identity = 52/93 (55.91%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHS 280 A +R+ ++LLDEATSALD ESE+ VQEALD+A G+T IV+AHRLSTI+NA +I VID+GKV E G+H LL G Y M+ +Q T + Sbjct: 1187 ALIRQPRVLLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIDNGKVKEHGTHQQLLAQK--GIYFSMVNIQAGTQN 1277
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: ABCB8_HUMAN (ATP-binding cassette sub-family B member 8, mitochondrial OS=Homo sapiens GN=ABCB8 PE=1 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 1.375e-21 Identity = 51/88 (57.95%), Postives = 67/88 (76.14%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +++ +++LDEATSALDAESER VQEALDRA +G+T +V+AHRLST+R AH I V+ DG+V E G+H LLK G YA +I+ Q Sbjct: 625 ALIKQPTVLILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRGAHCIVVMADGRVWEAGTHEELLKKG--GLYAELIRRQ 710
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: AB15B_ARATH (ABC transporter B family member 15 OS=Arabidopsis thaliana GN=ABCB15 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.375e-21 Identity = 56/112 (50.00%), Postives = 75/112 (66.96%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQV-----IGMTSGSSSSAR 322 A ++ I+LLDEATSALD+ESER VQEAL+ A G+TTI++AHRLSTIRNA VI+V+ +G + E GSH L++ N DG Y+ ++ LQ+ + IG S S R Sbjct: 511 AIIKSPTILLLDEATSALDSESERVVQEALENASIGRTTILIAHRLSTIRNADVISVVKNGHIVETGSHDELME-NIDGQYSTLVHLQQIEKQDINVSVKIGPISDPSKDIR 621 HSP 2 Score: 99.7525 bits (247), Expect = 6.822e-21 Identity = 47/88 (53.41%), Postives = 65/88 (73.86%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ ++LLDEATSALD++SER VQ+AL+R G+T++V+AHRLSTI+N IAV+D GK+ E G+HS LL P G Y ++ LQ Sbjct: 1149 AVLKNPSVLLLDEATSALDSQSERVVQDALERVMVGRTSVVIAHRLSTIQNCDAIAVLDKGKLVERGTHSSLLSKGPTGIYFSLVSLQ 1236
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MDR3_HUMAN (Multidrug resistance protein 3 OS=Homo sapiens GN=ABCB4 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.795e-21 Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A VR +I+LLDEATSALD ESE VQ ALD+A G+TTIV+AHRLST+RNA VIA +DG + E GSHS L+K +G Y +++ +Q Sbjct: 546 ALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFEDGVIVEQGSHSELMKK--EGVYFKLVNMQ 631 HSP 2 Score: 95.1301 bits (235), Expect = 1.680e-19 Identity = 50/93 (53.76%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHS 280 A +R+ +I+LLDEATSALD ESE+ VQEALD+A G+T IV+AHRLSTI+NA +I V +G+V E G+H LL G Y M+ +Q T + Sbjct: 1195 ALIRQPQILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLLAQK--GIYFSMVSVQAGTQN 1285
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: ABCBA_HUMAN (ATP-binding cassette sub-family B member 10, mitochondrial OS=Homo sapiens GN=ABCB10 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 2.345e-21 Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRF 271 A ++ +I+LLDEATSALDAE+E VQEALDR G+T +V+AHRLSTI+NA+++AV+D GK+ E G H LL + P+G Y +++ Q F Sbjct: 647 ALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEELL-SKPNGIYRKLMNKQSF 735
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: ABCB8_PONAB (ATP-binding cassette sub-family B member 8, mitochondrial OS=Pongo abelii GN=ABCB8 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.345e-21 Identity = 51/88 (57.95%), Postives = 67/88 (76.14%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +++ +++LDEATSALDAESER VQEALDRA +G+T +V+AHRLST+R AH I V+ DG+V E G+H LLK G YA +I+ Q Sbjct: 608 ALIKQPTVLILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRGAHRIVVMADGRVWEAGTHEELLKKG--GLYAELIRRQ 693 The following BLAST results are available for this feature:
BLAST of FC920628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920628 ID=FC920628; Name=FC920628; organism=Citrus clementina; type=EST; length=480bpback to top |