FC920628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_YERPA (Lipid A export ATP-binding/permease protein msbA OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=msbA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 7.805e-17 Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +R I++LDEATSALD ESER++Q ALD +T++V+AHRLSTI A I VI+DG++ E G H+ LL G YA++ ++Q Sbjct: 494 ALLRNCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVIEDGRIVERGVHAELLVQ--QGVYAQLNRMQ 579
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_HAEIN (Lipid A export ATP-binding/permease protein msbA OS=Haemophilus influenzae GN=msbA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 7.805e-17 Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +R + +++LDEATSALD ESER++Q AL+ +T +V+AHRLSTI NA I VID G++ E G+H LL+ N G Y ++ +Q Sbjct: 499 ALLRNSPVLILDEATSALDTESERAIQSALEELKKDRTVVVIAHRLSTIENADEILVIDHGEIRERGNHKTLLEQN--GAYKQLHSMQ 584
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MDR49_DROME (Multidrug resistance protein homolog 49 OS=Drosophila melanogaster GN=Mdr49 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 7.805e-17 Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 262 A VR+ +++LLDEATSALD SE+ VQ AL+ A G TT+VVAHRLSTI NA I + DG VAE G+H L++ G Y ++ + Sbjct: 554 ALVRQPQVLLLDEATSALDPTSEKRVQSALELASQGPTTLVVAHRLSTITNADKIVFLKDGVVAEQGTHEELMERR--GLYCELVSI 638 HSP 2 Score: 85.8853 bits (211), Expect = 1.019e-16 Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQR 268 A VR +I++LDEATSALD ESE+ VQ+ALD A SG+T + +AHRL+T+RNA +I V+ G V E G+H L+ N YA + +Q+ Sbjct: 1213 ALVRNPKILILDEATSALDLESEKVVQQALDEARSGRTCLTIAHRLTTVRNADLICVLKRGVVVEHGTHDELMALNK--IYANLYLMQQ 1299
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: LKTB_PASSP (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica-like sp. (strain 5943B) GN=lktB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 7.805e-17 Identity = 41/88 (46.59%), Postives = 62/88 (70.45%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A V +I++ DEATSALD ESE + + + + C G+T I++AHRLST++NA I V++ G++ E G H+ LL+NN +G Y+ + QLQ Sbjct: 620 ALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHNELLQNN-NGLYSYLHQLQ 706
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: ABCB9_RAT (ATP-binding cassette sub-family B member 9 OS=Rattus norvegicus GN=Abcb9 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 7.805e-17 Identity = 46/116 (39.66%), Postives = 68/116 (58.62%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQVIGMTSGSSSSARPKDDEEREA 349 A VR +++LDEATSALDAESE +Q+A+ T +++AHRLST+ AH+I V+D G+V + G+H LL G YA+++Q Q + T+G P + E +A Sbjct: 652 ALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQRHTVLIIAHRLSTVERAHLIVVLDKGRVVQQGTHQQLLAQG--GLYAKLVQRQMLGLEHPLDYTAGHK---EPPSNTEHKA 762
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: ABCB6_XENTR (ATP-binding cassette sub-family B member 6, mitochondrial OS=Xenopus tropicalis GN=abcb6 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 7.805e-17 Identity = 49/108 (45.37%), Postives = 68/108 (62.96%), Query Frame = 2 Query: 8 VRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQVIGMTSGSSSSARPKD 331 ++ +I+LLDEATSALD E+ER++Q +L + C+ +TTIVVAHRLST+ N+ I V+ +G++ E G H LL G YA M Q Q+ G S S S + KD Sbjct: 733 LKAPQIILLDEATSALDTETERNIQASLAKVCANRTTIVVAHRLSTVINSDQILVLKEGQIVERGRHEELLLKG--GVYAGMWQKQQ------SGSESSSDSDSERKD 832
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: ABCB6_RAT (ATP-binding cassette sub-family B member 6, mitochondrial OS=Rattus norvegicus GN=Abcb6 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 7.805e-17 Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 2 Query: 8 VRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQR 268 ++ +I+LLDEATSALD +ER++Q +L + C+ +TTIVVAHRLST+ NA I VI DG + E G H LL G YA M QLQ+ Sbjct: 742 LKAPDIILLDEATSALDTSNERAIQASLAKVCTNRTTIVVAHRLSTVVNADQILVIKDGCIIERGRHEALLSRG--GVYAEMWQLQQ 826
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_SALPA (Lipid A export ATP-binding/permease protein msbA OS=Salmonella paratyphi A GN=msbA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.019e-16 Identity = 43/88 (48.86%), Postives = 63/88 (71.59%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +R + I++LDEATSALD ESER++Q ALD +T++++AHRLSTI A I V++DG + E G+HS LL + G YA++ ++Q Sbjct: 494 ALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLMIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQH--GVYAQLHKMQ 579
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_DECAR (Lipid A export ATP-binding/permease protein msbA OS=Dechloromonas aromatica (strain RCB) GN=msbA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.019e-16 Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQR 268 A ++ A I++LDEATSALD ESER VQ ALD G++T+V+AHRLSTI A I + G E GSH+ LL + DG YAR+ ++Q+ Sbjct: 493 AILKDAPILILDEATSALDTESERHVQAALDELMRGRSTLVIAHRLSTIERADRIIALAHGHKQEEGSHAELLAH--DGLYARLYRMQK 579
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_CHRVO (Lipid A export ATP-binding/permease protein msbA OS=Chromobacterium violaceum GN=msbA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.019e-16 Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ A +++LDEATSALD +SER VQ AL+ +TTIV+AHRLSTI NA I V+ G++AE G H LL+ G YAR+ LQ Sbjct: 492 ALLKNAPLLILDEATSALDTQSERLVQAALENLMKNRTTIVIAHRLSTIENADRIVVMHQGRLAEQGRHQALLEQG--GLYARLHSLQ 577 The following BLAST results are available for this feature:
BLAST of FC920628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920628 ID=FC920628; Name=FC920628; organism=Citrus clementina; type=EST; length=480bpback to top |