FC920628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: ABCB9_HUMAN (ATP-binding cassette sub-family B member 9 OS=Homo sapiens GN=ABCB9 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.019e-16 Identity = 43/101 (42.57%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQVIGMTSG 304 A VR +++LDEATSALDAESE +Q+A+ T +++AHRLST+ +AH+I V+D G+V + G+H LL G YA+++Q Q T+G Sbjct: 656 ALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQKHTVLIIAHRLSTVEHAHLIVVLDKGRVVQQGTHQQLLAQG--GLYAKLVQRQMLGLQPAADFTAG 754
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: ABCB6_MOUSE (ATP-binding cassette sub-family B member 6, mitochondrial OS=Mus musculus GN=Abcb6 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.019e-16 Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 2 Query: 8 VRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQR 268 ++ +I+LLDEATSALD +ER++Q +L + C+ +TTIV+AHRLST+ NA I VI DG + E G H LL G YA M QLQ+ Sbjct: 742 LKAPDIILLDEATSALDTSNERAIQASLAKVCTNRTTIVIAHRLSTVVNADQILVIKDGCIIERGRHEALLSRG--GVYAEMWQLQQ 826
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_NEIMB (Lipid A export ATP-binding/permease protein msbA OS=Neisseria meningitidis serogroup B GN=msbA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.331e-16 Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNN 229 A ++ A I+LLDEATSALD ESER VQ+AL+R +T I+VAHRL+TI A I V+DDGK+ E G+H L+ N Sbjct: 527 AILKDAPILLLDEATSALDNESERLVQQALERLMENRTGIIVAHRLTTIEGADRIIVMDDGKIIEQGTHEQLMSQN 602
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_NEIMA (Lipid A export ATP-binding/permease protein msbA OS=Neisseria meningitidis serogroup A GN=msbA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.331e-16 Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNN 229 A ++ A I+LLDEATSALD ESER VQ+AL+R +T I+VAHRL+TI A I V+DDGK+ E G+H L+ N Sbjct: 527 AILKDAPILLLDEATSALDNESERLVQQALERLMENRTGIIVAHRLTTIEGADRIIVMDDGKIIEQGTHEQLMSQN 602
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_DESPS (Lipid A export ATP-binding/permease protein msbA OS=Desulfotalea psychrophila GN=msbA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.331e-16 Identity = 43/74 (58.11%), Postives = 53/74 (71.62%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLK 223 A + A I++LDEATSALD ESER VQ+AL+ +TT V+AHRLSTI+NA I V+ GK+ E GSH LLK Sbjct: 487 ALLADAPILILDEATSALDTESEREVQKALENLMQNRTTFVIAHRLSTIKNASRIVVVKKGKIVEEGSHEELLK 560
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_XYLFT (Lipid A export ATP-binding/permease protein msbA OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=msbA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.739e-16 Identity = 44/88 (50.00%), Postives = 62/88 (70.45%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ A I++LDEAT+ALD ESER VQ+AL R +TT+V+AHRLSTI++A + V+D G++ E G+H LL DG YA + +Q Sbjct: 498 AMLKDAPILILDEATAALDNESERLVQDALQRLMPERTTLVIAHRLSTIKHADQVLVMDQGRIIESGTHVDLLAR--DGLYAYLYSMQ 583
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_XYLFA (Lipid A export ATP-binding/permease protein msbA OS=Xylella fastidiosa GN=msbA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.739e-16 Identity = 44/88 (50.00%), Postives = 62/88 (70.45%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ A I++LDEAT+ALD ESER VQ+AL R +TT+V+AHRLSTI++A + V+D G++ E G+H LL DG YA + +Q Sbjct: 498 AMLKDAPILILDEATAALDNESERLVQDALQRLMPERTTLVIAHRLSTIKHADQVLVMDQGRIIESGTHVDLLAR--DGLYAYLYSMQ 583
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_SODGM (Lipid A export ATP-binding/permease protein msbA OS=Sodalis glossinidius (strain morsitans) GN=msbA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.739e-16 Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +R I++LDEATSALD ESER++Q+ALD +T++V+AHRLSTI A I V+ +G++ E G+H L+ G YA++ QLQ Sbjct: 494 ALLRDCPILILDEATSALDTESERAIQKALDALQKNRTSLVIAHRLSTIEKADEILVVVEGRIVERGNHEELMSR--QGVYAQLHQLQ 579
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: ABCB9_MOUSE (ATP-binding cassette sub-family B member 9 OS=Mus musculus GN=Abcb9 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.739e-16 Identity = 46/116 (39.66%), Postives = 68/116 (58.62%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQVIGMTSGSSSSARPKDDEEREA 349 A VR +++LDEATSALDAESE +Q+A+ T +++AHRLST+ AH+I V+D G+V + G+H LL G YA+++Q Q + T +S P + E +A Sbjct: 652 ALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQRHTVLIIAHRLSTVERAHLIVVLDKGRVVQQGTHQQLLAQG--GLYAKLVQRQMLGLEHPLDYT---ASHKEPPSNTEHKA 762
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_THIDA (Lipid A export ATP-binding/permease protein msbA OS=Thiobacillus denitrificans (strain ATCC 25259) GN=msbA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.271e-16 Identity = 44/88 (50.00%), Postives = 62/88 (70.45%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ A I++LDEATSALD+ESER VQ AL+ +TT+V+AHRLSTI A+ I V++ G++ E G+H+ LL G YA++ LQ Sbjct: 491 AILKNAPILILDEATSALDSESERHVQAALETLMQNRTTLVIAHRLSTIERANRIVVLEGGRIVETGAHADLLAK--QGRYAQLHALQ 576 The following BLAST results are available for this feature:
BLAST of FC920628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920628 ID=FC920628; Name=FC920628; organism=Citrus clementina; type=EST; length=480bpback to top |