FC920628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_FRATT (Lipid A export ATP-binding/permease protein msbA OS=Francisella tularensis subsp. tularensis GN=msbA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.271e-16 Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 259 A ++ A +++ DEATSALD ESER VQ+AL+ TTIV+AHRLST+ NA I V+D G+V E G H LL+ G Y R+ Q Sbjct: 522 ALLKNAPVLIFDEATSALDNESERVVQQALESLTKSCTTIVIAHRLSTVENADKIVVMDGGRVVESGKHQELLEQG--GLYTRLYQ 605
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_FRAT1 (Lipid A export ATP-binding/permease protein msbA OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=msbA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.271e-16 Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 259 A ++ A +++ DEATSALD ESER VQ+AL+ TTIV+AHRLST+ NA I V+D G+V E G H LL+ G Y R+ Q Sbjct: 522 ALLKNAPVLIFDEATSALDNESERVVQQALESLTKSCTTIVIAHRLSTVENADKIVVMDGGRVVESGKHQELLEQG--GLYTRLYQ 605
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: ABCB6_HUMAN (ATP-binding cassette sub-family B member 6, mitochondrial OS=Homo sapiens GN=ABCB6 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.271e-16 Identity = 46/82 (56.10%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 23 IMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQR 268 I+LLDEATSALD +ER++Q +L + C+ +TTIVVAHRLST+ NA I VI DG + E G H LL G YA M QLQ+ Sbjct: 747 IILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRLSTVVNADQILVIKDGCIVERGRHEALLSRG--GVYADMWQLQQ 826
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_PSYCK (Lipid A export ATP-binding/permease protein msbA OS=Psychrobacter cryohalolentis (strain K5) GN=msbA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.966e-16 Identity = 43/84 (51.19%), Postives = 63/84 (75.00%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 253 A ++ A I++LDEATSALD ESE +Q+ALD +TT+V+AHRL+TI +A IAV+D G++ ELG+H+ L++ + G YA+M Sbjct: 511 ALLKDAPILILDEATSALDNESEYYIQKALDNIMKNRTTLVIAHRLTTIESADRIAVLDGGQIVELGTHTQLMQLH--GHYAQM 592
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_PSYA2 (Lipid A export ATP-binding/permease protein msbA OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=msbA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.966e-16 Identity = 43/84 (51.19%), Postives = 63/84 (75.00%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 253 A ++ A I++LDEATSALD ESE +Q+ALD +TT+V+AHRL+TI +A IAV+D G++ ELG+H+ L++ + G YA+M Sbjct: 508 ALLKDAPILILDEATSALDNESEYYIQKALDNIMRNRTTLVIAHRLTTIESADRIAVLDGGRIVELGTHAELMQLH--GHYAQM 589
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_METCA (Lipid A export ATP-binding/permease protein msbA OS=Methylococcus capsulatus GN=msbA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.966e-16 Identity = 47/95 (49.47%), Postives = 66/95 (69.47%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQV 286 A ++ A I++LDEATSALDAESER VQ+AL+ +TT+V+AHRLSTI+NA I V+ G++ E G+H+ L+ G YA + +Q F +S V Sbjct: 499 ALLKNAPILILDEATSALDAESERYVQQALEVLMQNRTTLVIAHRLSTIQNADQICVMRGGRIIECGTHAQLMAAR--GGYADLYAMQ-FGYSSV 590
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_PSEA6 (Lipid A export ATP-binding/permease protein msbA OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=msbA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.874e-16 Identity = 45/88 (51.14%), Postives = 63/88 (71.59%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A + A +++LDEATSALD ESER +Q+AL+ +T+IVVAHRLSTI +A I VI+ G++ E G H+ LL + DG YA++ +LQ Sbjct: 492 AVLLDAPVLILDEATSALDTESERLIQDALETLQQDRTSIVVAHRLSTIESADQILVIERGRILEQGDHASLL--SEDGAYAQLHKLQ 577
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_IDILO (Lipid A export ATP-binding/permease protein msbA OS=Idiomarina loihiensis GN=msbA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.874e-16 Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ A I++LDEATSALD ESER +Q+AL +T IV+AHRLSTI NA I V+D+G++ E G+H LL + +G Y ++ LQ Sbjct: 492 ALLQDAPILILDEATSALDTESERHIQDALGTLRKNRTAIVIAHRLSTIENADEILVMDNGEIIERGTHQQLL--DQEGAYFQLHNLQ 577
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: HLYB_ECOL6 (Alpha-hemolysin translocation ATP-binding protein hlyB OS=Escherichia coli O6 GN=hlyB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.874e-16 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A V +I++ DEATSALD ESE + + + C G+T I++AHRLST++NA I V++ GK+ E G H LL + P+ Y+ + QLQ Sbjct: 619 ALVNNPKILIFDEATSALDYESEHIIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELL-SEPESLYSYLYQLQ 705
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: HLYBP_ECOLX (Alpha-hemolysin translocation ATP-binding protein hlyB OS=Escherichia coli GN=hlyB PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.874e-16 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A V +I++ DEATSALD ESE + + + C G+T I++AHRLST++NA I V++ GK+ E G H LL + P+ Y+ + QLQ Sbjct: 619 ALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELL-SEPESLYSYLYQLQ 705 The following BLAST results are available for this feature:
BLAST of FC920628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920628 ID=FC920628; Name=FC920628; organism=Citrus clementina; type=EST; length=480bpback to top |