FC920628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y4GM_RHISN (Uncharacterized ABC transporter ATP-binding protein y4gM OS=Rhizobium sp. (strain NGR234) GN=NGR_a03510 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.472e-15 Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +R AEI++ DEATSALD+ESE +++AL R +TTI++AHRLST+ A I V++ G+VAE G LL + DG Y R+ +LQ Sbjct: 496 AMLRNAEILIFDEATSALDSESEIQIRQALARLTRKRTTIMIAHRLSTVTAADNIVVMEGGQVAEQGPQGRLL--SQDGVYRRLYELQ 581
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: RTX3B_ACTPL (Toxin RTX-III translocation ATP-binding protein OS=Actinobacillus pleuropneumoniae GN=apxIIIB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.472e-15 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A V I++ DEATSALD ESE + + + + C G+T I++AHRLST++NA I V++ G + E G H+ LL+N +G Y + QLQ Sbjct: 623 ALVNNPRILIFDEATSALDYESEHIIMQNMQKICHGRTVIIIAHRLSTVKNADRIIVMEKGHIVEQGKHNQLLENE-NGLYYYLNQLQ 709
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_FRANO (Lipid A export ATP-binding/permease protein msbA OS=Francisella novicida GN=msbA PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.472e-15 Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLK 223 A ++ A +++ DEATSALD ESER VQ+AL+ TTIV+AHRLST+ NA I V+D GKV E G H LL+ Sbjct: 501 ALLKNAPVLIFDEATSALDNESERVVQQALESLTESCTTIVIAHRLSTVENADKIVVMDGGKVVESGKHQELLE 574
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: RTX1B_ACTPL (Toxin RTX-I translocation ATP-binding protein OS=Actinobacillus pleuropneumoniae GN=apxIB PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.923e-15 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A V +I++ DEATSALD ESE + + + C G+T I++AHRLST++NA I V++ G++ E G H LL +P+G Y + QLQ Sbjct: 619 ALVNNPKILIFDEATSALDYESEHIIMRNMHQICKGRTVIIIAHRLSTVKNADRIIVMEKGQIVEQGKHKELLA-DPNGLYHYLHQLQ 705
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_POLSJ (Lipid A export ATP-binding/permease protein msbA OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=msbA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.923e-15 Identity = 41/87 (47.13%), Postives = 63/87 (72.41%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 262 A + A I++LDEATSALD ESE +VQEA+ R + +T++V+AHRLST+++A I +++ G++ E G+H+ LL N G YA + +L Sbjct: 500 ALYKNAPILVLDEATSALDTESELAVQEAIKRLTASRTSLVIAHRLSTVQHADRIIMMEAGRMIESGTHAELLARN--GAYAHLYRL 584
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_NEIG1 (Lipid A export ATP-binding/permease protein msbA OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=msbA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.923e-15 Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNN 229 A ++ A I+LLDEATSALD ESER VQ+AL+R +T I+VAHRL+T+ +A I V+D GK+ E G+H L+ N Sbjct: 527 AILKDAPILLLDEATSALDNESERLVQQALERLMENRTGIIVAHRLTTVESADRIIVMDGGKIIEQGTHDQLMFQN 602
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: HLYB_ECO57 (Alpha-hemolysin translocation ATP-binding protein hlyB OS=Escherichia coli O157:H7 GN=hlyB PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.923e-15 Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A V I++ DEATSALD ESE + + + R C +T I++AHRLST++NA+ I V+D+G ++E G+H L+ + D YA + QLQ Sbjct: 619 ALVTNPRILIFDEATSALDYESENIIMKNMSRICKNRTVIIIAHRLSTVKNANRIIVMDNGFISEDGTHKELI-SKKDSLYAYLYQLQ 705
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_NITWN (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=ndvA PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 3.279e-15 Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQVIGMTSGSSSS 316 A ++ I++LDEATSALDA +E V ALD G+TT V+AHRLSTIRNA I V DG+V E G+ LL N G +A++ + Q T S S ++ Sbjct: 495 ALLKDPPILILDEATSALDAVTEAKVNAALDEVMKGRTTFVIAHRLSTIRNAARILVFADGRVIESGTFGELLANG--GHFAQLAKAQFMTQESTQADLSSSRTN 597
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_HAES1 (Lipid A export ATP-binding/permease protein msbA OS=Haemophilus somnus (strain 129Pt) GN=msbA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.279e-15 Identity = 44/92 (47.83%), Postives = 60/92 (65.22%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTH 277 A +R + +++LDEATSALD ESER++Q AL+ +T +V+AHRLSTI A I VI+ G++ E GSH LL N G Y ++ Q F H Sbjct: 494 ALLRDSPVLILDEATSALDTESERAIQAALETLQKDRTVLVIAHRLSTIEKADEILVIEQGEIKERGSHQELLALN--GAYKQLHSTQ-FNH 582
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_NITOC (Lipid A export ATP-binding/permease protein msbA OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=msbA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.283e-15 Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHS 280 A ++ A I++LDEAT++LD E+ER +Q AL+ +TT+V+AHRLST+ NA I V+ G++ E G+HS LL + YA + +LQ F HS Sbjct: 495 ALLKDAPILILDEATASLDTEAERHIQAALETLMRQRTTLVIAHRLSTVENADQIIVLHQGQIIERGTHSQLLAR--ESHYAGLYRLQ-FRHS 584 The following BLAST results are available for this feature:
BLAST of FC920628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920628 ID=FC920628; Name=FC920628; organism=Citrus clementina; type=EST; length=480bpback to top |