FC920628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: HLYB_PROVU (Alpha-hemolysin translocation ATP-binding protein hlyB OS=Proteus vulgaris GN=hlyB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.283e-15 Identity = 39/88 (44.32%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A V +I++ DEATSALD ESE + + + C G+T I++AHRLST++NA I V++ G++ E G H LL ++P+ Y + QLQ Sbjct: 619 ALVNNPKILIFDEATSALDYESEHVIMRNMHKICQGRTVIIIAHRLSTVKNADRIIVMEKGQIIEQGKHKELL-SDPESLYHYLHQLQ 705
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: CYAB_BORPE (Cyclolysin secretion/processing ATP-binding protein cyaB OS=Bordetella pertussis GN=cyaB PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 4.283e-15 Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A + + +++LDEATSALD ESE +Q + C G+T I++AHRLS +R A I V++ G+VAE GSH LL G YAR+ LQ Sbjct: 622 ALIHRPRVLILDEATSALDYESEHIIQRNMRDICDGRTVIIIAHRLSAVRCADRIVVMEGGEVAECGSHETLLA--AGGLYARLQALQ 707
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_XANOR (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas oryzae pv. oryzae GN=msbA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.594e-15 Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ A I++LDEAT+ALD ESER VQ+AL + +TT+V+AHRLSTI +A + V+D G++ E G+H LL G Y+ + +Q Sbjct: 498 AMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHHELLAQG--GLYSHLHGMQ 583
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_XANOM (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=msbA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.594e-15 Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ A I++LDEAT+ALD ESER VQ+AL + +TT+V+AHRLSTI +A + V+D G++ E G+H LL G Y+ + +Q Sbjct: 498 AMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHHELLAQG--GLYSHLHGMQ 583
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: LMRA_LACLA (Multidrug resistance ABC transporter ATP-binding and permease protein OS=Lactococcus lactis subsp. lactis GN=lmrA PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 5.594e-15 Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 AF+R +I++LDEAT++LD+ESE VQ+ALD G+TT+V+AHRLSTI +A I I+ G++ G H+ L+ +P YA+ + Q Sbjct: 500 AFLRNPKILMLDEATASLDSESESMVQKALDSLMKGRTTLVIAHRLSTIVDADKIYFIEKGQITGSGKHNELVATHP--LYAKYVSEQ 585
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y2003_STAA8 (Putative multidrug export ATP-binding/permease protein SAOUHSC_02003 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02003 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 5 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 F+ I++LDEATSALD ESE +QEALD +TT++VAHRLSTI +A I VI++G + E G+H L+ G Y + +Q Sbjct: 492 FLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAK--QGAYEHLYSIQ 576
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y1956_STAAR (Putative multidrug export ATP-binding/permease protein SAR1956 OS=Staphylococcus aureus (strain MRSA252) GN=SAR1956 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 5 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 F+ I++LDEATSALD ESE +QEALD +TT++VAHRLSTI +A I VI++G + E G+H L+ G Y + +Q Sbjct: 492 FLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAK--QGAYEHLYSIQ 576
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y1924_STAAC (Putative multidrug export ATP-binding/permease protein SACOL1924 OS=Staphylococcus aureus (strain COL) GN=SACOL1924 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 5 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 F+ I++LDEATSALD ESE +QEALD +TT++VAHRLSTI +A I VI++G + E G+H L+ G Y + +Q Sbjct: 492 FLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAK--QGAYEHLYSIQ 576
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y1866_STAAM (Putative multidrug export ATP-binding/permease protein SAV1866 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV1866 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 5 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 F+ I++LDEATSALD ESE +QEALD +TT++VAHRLSTI +A I VI++G + E G+H L+ G Y + +Q Sbjct: 492 FLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAK--QGAYEHLYSIQ 576
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y1847_STAA3 (Putative multidrug export ATP-binding/permease protein SAUSA300_1847 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_1847 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 5 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 F+ I++LDEATSALD ESE +QEALD +TT++VAHRLSTI +A I VI++G + E G+H L+ G Y + +Q Sbjct: 492 FLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAK--QGAYEHLYSIQ 576 The following BLAST results are available for this feature:
BLAST of FC920628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920628 ID=FC920628; Name=FC920628; organism=Citrus clementina; type=EST; length=480bpback to top |