FC920628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y1806_STAAW (Putative multidrug export ATP-binding/permease protein MW1806 OS=Staphylococcus aureus (strain MW2) GN=MW1806 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 5 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 F+ I++LDEATSALD ESE +QEALD +TT++VAHRLSTI +A I VI++G + E G+H L+ G Y + +Q Sbjct: 492 FLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAK--QGAYEHLYSIQ 576
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y1799_STAAB (Putative multidrug export ATP-binding/permease protein SAB1799c OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB1799c PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 5 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 F+ I++LDEATSALD ESE +QEALD +TT++VAHRLSTI +A I VI++G + E G+H L+ G Y + +Q Sbjct: 492 FLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAK--QGAYEHLYSIQ 576
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y1788_STAAS (Putative multidrug export ATP-binding/permease protein SAS1788 OS=Staphylococcus aureus (strain MSSA476) GN=SAS1788 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 5 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 F+ I++LDEATSALD ESE +QEALD +TT++VAHRLSTI +A I VI++G + E G+H L+ G Y + +Q Sbjct: 492 FLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAK--QGAYEHLYSIQ 576
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y1683_STAAN (Putative multidrug export ATP-binding/permease protein SA1683 OS=Staphylococcus aureus (strain N315) GN=SA1683 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 5 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 F+ I++LDEATSALD ESE +QEALD +TT++VAHRLSTI +A I VI++G + E G+H L+ G Y + +Q Sbjct: 492 FLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAK--QGAYEHLYSIQ 576
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_XANC5 (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=msbA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 40/88 (45.45%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ A +++LDEAT+ALD ESER VQ+AL + +TT+V+AHRLSTI +A + V+D G++ E G+H LL G Y+ + +Q Sbjct: 498 AMLKDAPVLILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHHQLLAQG--GLYSHLHGMQ 583
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_XANAC (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas axonopodis pv. citri GN=msbA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 40/88 (45.45%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ A +++LDEAT+ALD ESER VQ+AL + +TT+V+AHRLSTI +A + V+D G++ E G+H LL G Y+ + +Q Sbjct: 498 AMLKDAPVLILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHHQLLAQG--GLYSHLHGMQ 583
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: LMRA_LACLM (Multidrug resistance ABC transporter ATP-binding and permease protein OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=lmrA PE=3 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 AF+R +I++LDEAT++LD+ESE VQ ALD G+TT+V+AHRLSTI +A I I+ G++ G H+ L+ +P YA+ + Q Sbjct: 500 AFLRNPKILMLDEATASLDSESESMVQRALDSLMKGRTTLVIAHRLSTIVDADKIYFIEKGEITGSGKHNELVATHP--LYAKYVSEQ 585
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: LKTB_AGGAC (Leukotoxin translocation ATP-binding protein lktB OS=Aggregatibacter actinomycetemcomitans GN=lktB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A V I++ DEATSALD ESE + + + C +T +++AHRLST++NA I V+D G++ E G H LLK+ G Y+ + QLQ Sbjct: 619 ALVNNPRILIFDEATSALDYESENIIMHNMHKICQNRTVLIIAHRLSTVKNADRIIVMDKGEIIEQGKHQELLKDE-KGLYSYLHQLQ 705
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: AB20B_ARATH (ABC transporter B family member 20 OS=Arabidopsis thaliana GN=ABCB20 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.306e-15 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 23 IMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 274 I+LLDE T LD E+ER VQEALD G++TI++A RLS I+NA IAV+++G++ E+G+H L+ N G YA +++ + T Sbjct: 572 ILLLDEVTGGLDFEAERIVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELI--NLGGLYAELLKCEEAT 653 HSP 2 Score: 70.8626 bits (172), Expect = 3.394e-12 Identity = 37/85 (43.53%), Postives = 58/85 (68.24%), Query Frame = 2 Query: 8 VRKAEIMLLDEATSALDAESERSVQEALDRACSG-KTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 259 ++ A I+L+DEA+S++++ES R VQEALD G KTTI++AHR + +R+ I V++ G++ E G+H L N G Y R++Q Sbjct: 1313 LKNAPIILIDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLAAKN--GLYVRLMQ 1395
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: YHEH_BACSU (Probable multidrug resistance ABC transporter ATP-binding/permease protein yheH OS=Bacillus subtilis GN=yheH PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.541e-15 Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 23 IMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQR 268 I++LDEAT+ +D E+E +Q+ALD G+TT V+AHRLSTIRNA I V+D G++ E G+H L+ +G Y +M +LQ+ Sbjct: 587 ILILDEATAHIDTETEAVIQKALDVVKQGRTTFVIAHRLSTIRNADQILVLDKGEIVERGNHEELMA--LEGQYYQMYELQK 666 The following BLAST results are available for this feature:
BLAST of FC920628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920628 ID=FC920628; Name=FC920628; organism=Citrus clementina; type=EST; length=480bpback to top |