FC920628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y288_THEMA (Uncharacterized ABC transporter ATP-binding protein TM_0288 OS=Thermotoga maritima GN=TM_0288 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.541e-15 Identity = 34/74 (45.95%), Postives = 57/74 (77.03%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLK 223 AF+ +I++LDEATS +D ++E+S+Q A+ + GKT+I++AHRL+TI+NA +I V+ DG++ E+G H L++ Sbjct: 505 AFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQ 578
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_XANCP (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas campestris pv. campestris GN=msbA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.541e-15 Identity = 38/73 (52.05%), Postives = 54/73 (73.97%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLL 220 A ++ A I++LDEAT+ALD ESER VQ+AL + +TT+V+AHRLSTI +A + V+D G++ E G+H LL Sbjct: 498 AMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHQELL 570
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_XANC8 (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas campestris pv. campestris (strain 8004) GN=msbA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.541e-15 Identity = 38/73 (52.05%), Postives = 54/73 (73.97%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLL 220 A ++ A I++LDEAT+ALD ESER VQ+AL + +TT+V+AHRLSTI +A + V+D G++ E G+H LL Sbjct: 498 AMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHQELL 570
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA1_COLP3 (Lipid A export ATP-binding/permease protein msbA 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=msbA1 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.541e-15 Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 26 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 ++LDEATSALD ESER +Q+AL +T+IV+AHRLSTI NA I V++ GK+ E G+H LL G YA++ Q Sbjct: 523 LILDEATSALDTESERHIQDALQTLQQNRTSIVIAHRLSTIENADKIIVMEQGKIVEQGNHQSLLAK--QGAYAQLHSFQ 600
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: YGAD_BACSU (Putative multidrug export ATP-binding/permease protein ygaD OS=Bacillus subtilis GN=ygaD PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.246e-14 Identity = 36/72 (50.00%), Postives = 53/72 (73.61%), Query Frame = 2 Query: 5 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLL 220 F++ +++LDEATSALD ESE +QEA+D+ +TT VVAHRLSTI +A I V+++G + E+G+H L+ Sbjct: 493 FLKNPPLLILDEATSALDLESEHYIQEAMDKLAKDRTTFVVAHRLSTITHADKIVVMENGTIIEIGTHDELM 564
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_BARBK (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=ndvA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.246e-14 Identity = 40/94 (42.55%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQ 283 A ++ A I++LDEATSALD E+E V+ A+D +TT ++AHRLSTIRNA ++ +D G++ E GS L+ N DG + ++++ T +Q Sbjct: 485 AILKNAPILILDEATSALDVETEIRVKNAIDCISQNRTTFIIAHRLSTIRNADLVLFLDQGRLIEKGSFQELI--NKDGHFYKLLKAGGLTINQ 576
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_THICR (Lipid A export ATP-binding/permease protein msbA OS=Thiomicrospira crunogena (strain XCL-2) GN=msbA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.246e-14 Identity = 36/76 (47.37%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNN 229 AF++ A I+++DEATSALD +SE+ +QEA++ +T I++AHRLSTI NA I V+++G + E G+H+ L+ N Sbjct: 490 AFLKNAPILIMDEATSALDNQSEKLIQEAMNSLRKNRTVIIIAHRLSTIENADKIVVLEEGSLKEQGTHAELMALN 565
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_COXBU (Lipid A export ATP-binding/permease protein msbA OS=Coxiella burnetii GN=msbA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.246e-14 Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A + A I +LDEATS+LD SER +Q ALD TT+V+AHRLSTI A I V+++G++ E G+H LL N G YA + ++Q Sbjct: 491 ALFKNAPIHILDEATSSLDTHSERHIQAALDNLMDQCTTLVIAHRLSTIERADWIMVLEEGRLIEKGTHQQLLTLN--GAYAELYRMQ 576
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_NITHX (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=ndvA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.628e-14 Identity = 44/91 (48.35%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 274 A ++ I++LDEATSALDA +E V ALD G+TT V+AHRLSTIRNA I V ++G+V E G+ LL G +AR+ + Q T Sbjct: 495 ALLKDPPILILDEATSALDAVTEAKVNAALDEVMKGRTTFVIAHRLSTIRNATRILVFENGRVIENGTFDELLARG--GHFARLAKAQFMT 583
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_BARBA (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Bartonella bacilliformis GN=ndvA PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.628e-14 Identity = 40/94 (42.55%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQ 283 A ++ A I++LDEATSALD E+E V+ A+D +TT ++AHRLSTIRNA ++ +D G++ E GS L+ N DG + ++++ T +Q Sbjct: 485 AILKNAPILILDEATSALDVETEIRVKNAIDCISQNRTTFIIAHRLSTIRNADLVLFLDQGRLIEKGSFQELI--NKDGHFYKLLKRGGLTINQ 576 The following BLAST results are available for this feature:
BLAST of FC920628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920628 ID=FC920628; Name=FC920628; organism=Citrus clementina; type=EST; length=480bpback to top |