FC920628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y1051_HAEIN (Uncharacterized ABC transporter ATP-binding protein HI1051 OS=Haemophilus influenzae GN=HI1051 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.126e-14 Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 8 VRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 253 ++ A I+LLDEATSALD+E E ++QE+LD+ KT I +AHRLSTI + V+D G++ E G+H+ LL+ N G YA++ Sbjct: 521 LKDAPILLLDEATSALDSEVEVAIQESLDKMMENKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHAELLELN--GLYAKL 600
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: AB6B_ARATH (ABC transporter B family member 6 OS=Arabidopsis thaliana GN=ABCB6 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 2.126e-14 Identity = 40/84 (47.62%), Postives = 58/84 (69.05%), Query Frame = 2 Query: 23 IMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 274 I+LLDE T LD E+ER VQEALD G++TI++A RLS IRNA IAV+++G++ E+G+H L+ N YA +++ + T Sbjct: 570 ILLLDEVTGGLDFEAERVVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLLEMGTHDELI--NLGNLYAELLKCEEAT 651 HSP 2 Score: 72.0182 bits (175), Expect = 1.523e-12 Identity = 38/85 (44.71%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 8 VRKAEIMLLDEATSALDAESERSVQEALDRACSG-KTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 259 ++ A I+L+DEA+S++++ES R VQEALD G KTTI++AHR++ +R+ I V++ GK+ E G+H L N G Y R++Q Sbjct: 1312 LKNAPILLIDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRVAMMRHVDNIVVLNGGKIVEEGTHDCLAGKN--GLYVRLMQ 1394
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_RHOP5 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris (strain BisA53) GN=ndvA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.776e-14 Identity = 50/113 (44.25%), Postives = 62/113 (54.87%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQVIGMTSGSSSSARPKDDEE 340 A ++ I++LDEATSALDA +E V ALD G+TT V+AHRLSTIR+A I V D+G+V E GS LL AR H+Q M S+ SA P E Sbjct: 495 ALLKDPPILILDEATSALDAVTEAKVNLALDEVMKGRTTFVIAHRLSTIRHATRILVFDNGRVIESGSFDELL--------ARRGYFAELAHAQF--MVQDSARSAMPAAQPE 597
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: AB26B_ARATH (ABC transporter B family member 26, chloroplastic OS=Arabidopsis thaliana GN=ABCB26 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.776e-14 Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEAL----DRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +R I++LDEATSALDAESE +V+ L + + + ++ IV+AHRLSTI+ A I +D G+V E+GSH LL + DG YAR+ + Q Sbjct: 606 AILRDPRILILDEATSALDAESEHNVKGVLRSIGNDSATKRSVIVIAHRLSTIQAADRIVAMDSGRVVEMGSHKELL--SKDGLYARLTKRQ 695
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: YWJA_BACSU (Uncharacterized ABC transporter ATP-binding protein ywjA OS=Bacillus subtilis GN=ywjA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.626e-14 Identity = 38/87 (43.68%), Postives = 59/87 (67.82%), Query Frame = 2 Query: 5 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 F++ I++LDEATSALD E+E ++Q+AL G+TT+V+AHRL+TI++A I V+ + + E G H L++ G Y+R+ Q Q Sbjct: 484 FLKNPSILILDEATSALDTETEAAIQKALQELSEGRTTLVIAHRLATIKDADRIVVVTNNGIEEQGRHQDLIE--AGGLYSRLHQAQ 568
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: ABCB6_DICDI (ABC transporter B family member 6 OS=Dictyostelium discoideum GN=abcB6 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.735e-14 Identity = 40/95 (42.11%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQV 286 A ++ I++LDEA+S+LD +ER +Q+A++ G+TT+V+AHRLSTI + I V+ G + E GSHS+LL N D YA + Q+ + S + Sbjct: 576 ALLKDPPILILDEASSSLDTFTERKIQQAINEVSKGRTTLVIAHRLSTIIHCDEILVLKGGHIVERGSHSYLLDFNGD--YAHLWNQQQLSASDL 668
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_RHIL3 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ndvA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.185e-14 Identity = 38/86 (44.19%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 259 A ++ A I++LDEATSALD E+E V+ A+D +TT ++AHRLST+R A ++ +DDG+V E GS L +N G +A +++ Sbjct: 485 AILKDAPILVLDEATSALDVETEARVKAAIDNLRQNRTTFIIAHRLSTVREADMVLFLDDGRVVEQGSFDELSHSN--GRFAALLR 568
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: TAGA_DICDI (Serine protease/ABC transporter B family protein tagA OS=Dictyostelium discoideum GN=tagA PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 8.077e-14 Identity = 40/112 (35.71%), Postives = 66/112 (58.93%), Query Frame = 2 Query: 8 VRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQVIGMTSGSSSSARPKDDEER 343 ++ ++LLDE TS LD ESE+ VQ+++D+ G+T I+VAHRL+TI A +IAV+ D ++E+G+ LL G + +Q+Q + + + S+S D+ R Sbjct: 1528 IKNPTVLLLDETTSELDVESEKLVQDSIDKLVVGRTVIIVAHRLTTILTADIIAVVSDSTISEMGTPEELLAKK--GMFYDFVQIQYGKQGEELDIQLPSNSRNTRNADKLR 1637
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: HEPA_ANASP (Heterocyst differentiation ATP-binding protein hepA OS=Anabaena sp. (strain PCC 7120) GN=hepA PE=2 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 8.077e-14 Identity = 35/74 (47.30%), Postives = 54/74 (72.97%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLK 223 A +R EI++LDEATSALD+ SER +QE++++ G+T I +AHRLSTI A + V++ G++ E G++ LL+ Sbjct: 514 ALLRDPEILILDEATSALDSVSERLIQESIEKLSVGRTVIAIAHRLSTIAKADKVVVMEQGRIVEQGNYQELLE 587
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_BRAJA (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Bradyrhizobium japonicum GN=ndvA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.055e-13 Identity = 44/106 (41.51%), Postives = 62/106 (58.49%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQVIGMTSGSSSSA 319 A ++ I++LDEATSALDA +E V ALD G+TT V+AHRL+TIRNA I V ++G+V E G+ L+ G +A + + Q Q T S ++A Sbjct: 489 ALLKDPPILILDEATSALDAVTEVKVNAALDEVMRGRTTFVIAHRLATIRNATRILVFENGRVTESGTFDELVAKG--GHFAELARAQFMVQEQSRANTRASVTAA 592 The following BLAST results are available for this feature:
BLAST of FC920628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920628 ID=FC920628; Name=FC920628; organism=Citrus clementina; type=EST; length=480bpback to top |