FC920628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_RHOPA (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris GN=ndvA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.378e-13 Identity = 41/88 (46.59%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ I++LDEATSALDA +E + ALD G+TT V+AHRLSTIR+A I V D+GKV E G+ L+ G +A++ + Q Sbjct: 495 ALLKDPPILILDEATSALDAVTEAKLNLALDEVMKGRTTFVIAHRLSTIRDATRILVFDNGKVIESGTFDELVARG--GAFAQLARAQ 580
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_RHOPS (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris (strain BisB5) GN=ndvA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.799e-13 Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ I++LDEATSALDA +E V ALD G+TT V+AHRLSTIR+A I V D+GKV E G+ L+ G +A + + Q Sbjct: 495 ALLKDPPILILDEATSALDAVTEAKVNLALDEVMKGRTTFVIAHRLSTIRHATRILVFDNGKVIESGTFDELVAQR--GRFAELARAQ 580
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_RHIME (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium meliloti GN=ndvA PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 1.799e-13 Identity = 36/86 (41.86%), Postives = 59/86 (68.60%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 259 A ++ A I++LDEATSALD E+E V++A+D +TT ++AHRLST+R A ++ +D G+V E+G L ++N G +A +++ Sbjct: 485 AILKNAPILVLDEATSALDVETEARVKDAIDALRKDRTTFIIAHRLSTVREADLVIFMDQGRVVEMGGFHELSQSN--GRFAALLR 568
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_RHIEC (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ndvA PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 1.799e-13 Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 259 A ++ A I++LDEATSALD E+E V+ A+D +TT ++AHRLST+R A ++ +DDG+V E G L +N G +A +++ Sbjct: 485 AILKDAPILVLDEATSALDVETEARVKAAIDNLRQNRTTFIIAHRLSTVREADMVLFLDDGRVVEQGGFDELSHSN--GRFAALLR 568
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_BLOPB (Lipid A export ATP-binding/permease protein msbA OS=Blochmannia pennsylvanicus (strain BPEN) GN=msbA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.350e-13 Identity = 37/88 (42.05%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +R I++ DEATSALD+ SE + ++LD +T++++AHRLST+ NA I VI++G + E G H L++ G YA++ +LQ Sbjct: 496 ALLRDCPILIFDEATSALDSASEHIIHKSLDTLKKNRTSLIIAHRLSTVENADEILVIENGYIMERGVHKVLIRR--QGIYAQLYKLQ 581
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: BMRA_BACSU (Multidrug resistance ABC transporter ATP-binding/permease protein bmrA OS=Bacillus subtilis GN=bmrA PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.350e-13 Identity = 34/76 (44.74%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNN 229 A +R I++LDEATS+LD++SE+SVQ+AL+ G+TTIV+AHRLST+ +A + ++ G++ G+H L+ ++ Sbjct: 492 ALLRNPSILMLDEATSSLDSQSEKSVQQALEVLMEGRTTIVIAHRLSTVVDADQLLFVEKGEITGRGTHHELMASH 567
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_AGRVI (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Agrobacterium vitis GN=ndvA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.069e-13 Identity = 33/72 (45.83%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHL 217 A ++ A I++LDEATSALD E+E V+ A+DR +TT ++AHRLST+R A + +D G++ E+G + L Sbjct: 485 AILKDAPILVLDEATSALDVETEERVKSAIDRLRQNRTTFIIAHRLSTVREADQVLFLDHGRIVEMGGYDEL 556
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: EXP8_STRPN (Putative ABC transporter ATP-binding protein exp8 OS=Streptococcus pneumoniae GN=exp8 PE=3 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 4.009e-13 Identity = 38/82 (46.34%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 20 EIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 +I++LDEAT+ +D+E+E VQ +L + G+TTI +AHRLSTI++A+ I V+D G++ E G+H LL G Y +M LQ Sbjct: 496 KILILDEATANIDSETESLVQASLAKMRQGRTTIAIAHRLSTIQDANCIYVLDKGRIIESGTHEELLALG--GTYHKMYSLQ 575
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: YKNV_BACSU (Uncharacterized ABC transporter ATP-binding protein yknV OS=Bacillus subtilis GN=yknV PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.236e-13 Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 274 A + I++LDEAT+++D E+E +Q+AL G+T +++AHRLSTIR+A I V+D G+ E G+H LL G YA +++ Q T Sbjct: 513 ALLADPAIIILDEATASIDTETEVKIQQALKTLLKGRTAVMIAHRLSTIRDADRIIVLDHGRKIEEGNHDQLLAKG--GIYAGLVKAQYST 601
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_RHILO (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium loti GN=ndvA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.236e-13 Identity = 36/86 (41.86%), Postives = 59/86 (68.60%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 259 A ++ A I++LDEATSALD E+E V+EA+D +TT ++AHRL+T+R+A ++ +D G+V E+G + L N G +A +++ Sbjct: 485 AVLKDAPILVLDEATSALDVETEDRVKEAIDELRRDRTTFIIAHRLTTVRDADLVVFMDKGRVVEMGGFAELSLRN--GRFASLLR 568 The following BLAST results are available for this feature:
BLAST of FC920628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920628 ID=FC920628; Name=FC920628; organism=Citrus clementina; type=EST; length=480bpback to top |