FC920628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_AGRT5 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ndvA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.432e-12 Identity = 32/72 (44.44%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHL 217 A ++ A I++LDEATSALD E+E V+ A+D +TT ++AHRLST+R+A ++ +D G++ E G+ L Sbjct: 485 AILKNAPILVLDEATSALDVETEARVKAAVDALRKNRTTFIIAHRLSTVRDADLVLFLDQGRIIEKGTFDEL 556
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_BRUAB (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Brucella abortus GN=ndvA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.789e-12 Identity = 32/72 (44.44%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHL 217 A ++ + I++LDEATSALD E+E V +A+D +TT ++AHRLST+R+A ++ +D G + E GS + L Sbjct: 485 AILKDSPILVLDEATSALDVETEEKVTQAVDELSHNRTTFIIAHRLSTVRSADLVLFMDKGHLVESGSFNEL 556
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_BRUA2 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Brucella abortus (strain 2308) GN=ndvA PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.789e-12 Identity = 32/72 (44.44%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHL 217 A ++ + I++LDEATSALD E+E V +A+D +TT ++AHRLST+R+A ++ +D G + E GS + L Sbjct: 485 AILKDSPILVLDEATSALDVETEEKVTQAVDELSHNRTTFIIAHRLSTVRSADLVLFMDKGHLVESGSFNEL 556
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_BARQU (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Bartonella quintana GN=ndvA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.789e-12 Identity = 32/73 (43.84%), Postives = 52/73 (71.23%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLL 220 A ++ A I++LDEATSALD E+E V++ALD +TT ++AHRLST+R+A ++ +++G + E G+ L+ Sbjct: 485 AVLKNAPILILDEATSALDVETEARVKDALDCISHNRTTFIIAHRLSTVRHADLVLFLENGHLIEKGNFQELI 557
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA2_COLP3 (Lipid A export ATP-binding/permease protein msbA 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=msbA2 PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 5.789e-12 Identity = 34/72 (47.22%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHL 217 A +R A I++LDEATSALD SE+ +Q+AL R KT +++AH+LS+I++ I VI+ G++ E G+H L Sbjct: 499 AMLRDASIIVLDEATSALDNHSEKHIQQALTRLTQHKTVLIIAHKLSSIQHVDEIIVINKGRLIEQGNHKTL 570
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MDLB_BUCAP (Multidrug resistance-like ATP-binding protein mdlB OS=Buchnera aphidicola subsp. Schizaphis graminum GN=mdlB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.789e-12 Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 8 VRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRF 271 VR +I++LDEAT+ +D+ +E+ +Q L + T +V+AHRLST+ A +I V+ GK+ ELG+H LL+ G Y +M Q F Sbjct: 493 VRNPKILILDEATANIDSGTEKLIQTTLSSIRAKTTLVVIAHRLSTVIEADMIVVLKKGKIVELGTHKQLLEKK--GFYWKMYNFQLF 578
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: YFIC_BACSU (Uncharacterized ABC transporter ATP-binding protein yfiC OS=Bacillus subtilis GN=yfiC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.560e-12 Identity = 33/81 (40.74%), Postives = 56/81 (69.14%), Query Frame = 2 Query: 23 IMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 +++LDEATS +D +E ++QEAL R G+T++++AHRL+TI+ A I V+ +G++ E GSH L++ G Y+ + + Q Sbjct: 523 LLILDEATSNIDTVTEVNIQEALARLMEGRTSVIIAHRLNTIQRADQIVVLKNGEMIEKGSHDELIRQK--GFYSDLYESQ 601
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y492_RICBR (Putative export ATP-binding/permease protein RBE_0492 OS=Rickettsia bellii (strain RML369-C) GN=RBE_0492 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.560e-12 Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNN 229 A +RK +I+LLDEA +ALD++SE+ + ++ GK I +AHR+S+I +A I +ID G V G+H+HLLK + Sbjct: 487 ALLRKPQILLLDEAMNALDSQSEQKLLSSIRDIMKGKIVISIAHRISSIESADNILIIDKGAVEAEGTHAHLLKTS 562
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: NDVA_BRUME (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Brucella melitensis GN=ndvA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.560e-12 Identity = 31/72 (43.06%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHL 217 A ++ + I++LDEATSALD E+E +++A+D +TT ++AHRLST+R+A ++ +D G + E GS + L Sbjct: 485 AILKDSPILVLDEATSALDVETEEKLKQAVDELSHNRTTFIIAHRLSTVRSADLVLFMDKGHLVESGSFNEL 556
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: YKNU_BACSU (Uncharacterized ABC transporter ATP-binding protein yknU OS=Bacillus subtilis GN=yknU PE=3 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.684e-11 Identity = 33/81 (40.74%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 23 IMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 I++LD+ATSA+D ++E S+Q AL +TT +VAHR+S++++A I V + G++ E G+H LL+ G Y ++ LQ Sbjct: 493 ILILDDATSAVDMQTEHSIQLALKEVMKNRTTFIVAHRISSLKHADEILVFNKGRIRERGTHHELLEKG--GYYKKIYDLQ 571 The following BLAST results are available for this feature:
BLAST of FC920628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920628 ID=FC920628; Name=FC920628; organism=Citrus clementina; type=EST; length=480bpback to top |