FC920628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: YHEI_BACSU (Probable multidrug resistance ABC transporter ATP-binding/permease protein yheI OS=Bacillus subtilis GN=yheI PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.200e-11 Identity = 34/89 (38.20%), Postives = 56/89 (62.92%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQR 268 A + EI++LD++ SA+DA++E ++ + + GKTT ++ HRLS + +A +I V+D G +AE G+H LL NN G Y + Q+ Sbjct: 488 ALMANPEILILDDSLSAVDAKTEAAIIKNIRENRKGKTTFILTHRLSAVEHADLILVMDGGVIAERGTHQELLANN--GWYREQYERQQ 574
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y1303_MYCBO (Uncharacterized ABC transporter ATP-binding protein Mb1303c OS=Mycobacterium bovis GN=Mb1303c PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.200e-11 Identity = 33/84 (39.29%), Postives = 55/84 (65.48%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 253 AF+ + ++++LDEATS++D +E +Q A+ +T+ ++AHRLSTIR+A I V+ G++ E G+H+ LL G Y +M Sbjct: 547 AFLARPQLLILDEATSSVDTRTELLIQRAMRELRRDRTSFIIAHRLSTIRDADHILVVQTGQIVERGNHAELLARR--GVYYQM 628
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y1272_MYCTU (Uncharacterized ABC transporter ATP-binding protein Rv1272c/MT1310 OS=Mycobacterium tuberculosis GN=Rv1272c PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.200e-11 Identity = 33/84 (39.29%), Postives = 55/84 (65.48%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 253 AF+ + ++++LDEATS++D +E +Q A+ +T+ ++AHRLSTIR+A I V+ G++ E G+H+ LL G Y +M Sbjct: 547 AFLARPQLLILDEATSSVDTRTELLIQRAMRELRRDRTSFIIAHRLSTIRDADHILVVQTGQIVERGNHAELLARR--GVYYQM 628
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: ABCB7_HUMAN (ATP-binding cassette sub-family B member 7, mitochondrial OS=Homo sapiens GN=ABCB7 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 2.200e-11 Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ ++L DEATS+LD+ +E ++ A+ +T+I +AHRLST+ +A I V+D GKVAE G+H H L NP Y+ M Q Sbjct: 622 AILKDPPVILYDEATSSLDSITEETILGAMKDVVKHRTSIFIAHRLSTVVDADEIIVLDQGKVAERGTH-HGLLANPHSIYSEMWHTQ 708
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: YCFI_YEAST (Metal resistance protein YCF1 OS=Saccharomyces cerevisiae GN=YCF1 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 2.873e-11 Identity = 34/82 (41.46%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYA 247 A + ++I++LDEAT+A+D E+++ VQE + A +T + +AHRL+TI ++ I V+D+GKVAE S LL +N Y+ Sbjct: 1423 AMLVPSKILVLDEATAAVDVETDKVVQETIRTAFKDRTILTIAHRLNTIMDSDRIIVLDNGKVAEFDSPGQLLSDNKSLFYS 1504
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y663_HAEIN (Uncharacterized ABC transporter ATP-binding protein HI0663 OS=Haemophilus influenzae GN=HI0663 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.873e-11 Identity = 34/89 (38.20%), Postives = 53/89 (59.55%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQR 268 A + AE+ + DEATS +D ESE + + + + KT ++++HRL+ NA I V+D GK+ E G+H L++ G YA M Q Q+ Sbjct: 463 ALLHNAELYIFDEATSNIDVESEEIILQFIQQFKQQKTIVMISHRLANAVNADCINVLDQGKLIEQGTHKELMEK--QGAYAEMFQQQK 549
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y1383_MYCBO (Uncharacterized ABC transporter ATP-binding protein Mb1383 OS=Mycobacterium bovis GN=Mb1383 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.873e-11 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 253 A + +++LDEAT+ D ESE VQ+AL+R +T +V+AHRL TI A I V+D G++ E G+H LL G Y R+ Sbjct: 759 AILGDTPVLILDEATAFADPESEYLVQQALNRLTRDRTVLVIAHRLHTITRADQIVVLDHGRIVERGTHEELLA--AGGRYCRL 840
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y1348_MYCTU (Uncharacterized ABC transporter ATP-binding protein Rv1348/MT1390 OS=Mycobacterium tuberculosis GN=Rv1348 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.873e-11 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 253 A + +++LDEAT+ D ESE VQ+AL+R +T +V+AHRL TI A I V+D G++ E G+H LL G Y R+ Sbjct: 759 AILGDTPVLILDEATAFADPESEYLVQQALNRLTRDRTVLVIAHRLHTITRADQIVVLDHGRIVERGTHEELLA--AGGRYCRL 840
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MRP2_RAT (Canalicular multispecific organic anion transporter 1 OS=Rattus norvegicus GN=Abcc2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.752e-11 Identity = 33/75 (44.00%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 226 A +RK++I++LDEAT+A+D E++ +Q + + S T I +AHRL TI ++ I V+D+GK+ E GS LL N Sbjct: 1446 AVLRKSKILVLDEATAAVDLETDSLIQTTIRKEFSQCTVITIAHRLHTIMDSDKIMVLDNGKIVEYGSPEELLSN 1520
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: Y696_RICPR (Putative export ATP-binding/permease protein RP696 OS=Rickettsia prowazekii GN=RP696 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.900e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNN 229 A +RK +I+LLDEA SALD SE+ + A+ + G I +AHR+S+I +A I VID G V GSH L KN+ Sbjct: 488 ALLRKPKILLLDEAMSALDTMSEQKLLNAIKKIMKGNIIISIAHRISSIESADYILVIDKGGVVTEGSHYDLSKNS 563 The following BLAST results are available for this feature:
BLAST of FC920628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920628 ID=FC920628; Name=FC920628; organism=Citrus clementina; type=EST; length=480bpback to top |