FC920628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_SHEON (Lipid A export ATP-binding/permease protein msbA OS=Shewanella oneidensis GN=msbA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.683e-17 Identity = 42/88 (47.73%), Postives = 63/88 (71.59%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +R A +++LDEATSALD ESE+++Q+ LD +T++V+AHRLSTI +A I V+D G++ E G+H LL+ G YA++ Q+Q Sbjct: 513 AMLRDAPVLILDEATSALDTESEKAIQQGLDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVERGTHKSLLELG--GMYAKLYQMQ 598
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_PHOLL (Lipid A export ATP-binding/permease protein msbA OS=Photorhabdus luminescens subsp. laumondii GN=msbA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.683e-17 Identity = 43/88 (48.86%), Postives = 63/88 (71.59%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +R + +++LDEATSALD ESER++Q ALD +T++V+AHRLSTI NA I V++DG + E G H LL+ N G Y+++ ++Q Sbjct: 493 ALLRDSPVLILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIENADEILVVEDGHIVERGDHLSLLERN--GVYSQLHRMQ 578
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_METFK (Lipid A export ATP-binding/permease protein msbA OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=msbA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.683e-17 Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ A I+LLDEATSALD ESER VQ ALD +T+IV+AHRLSTI NA I V++ G++ E GSH LL DG YA++ + Q Sbjct: 496 AILKNAPILLLDEATSALDTESERHVQAALDELMQNRTSIVIAHRLSTIENADRIMVMEQGRIIEGGSHEELLA--LDGHYAKLYRKQ 581
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_ERWCT (Lipid A export ATP-binding/permease protein msbA OS=Erwinia carotovora subsp. atroseptica GN=msbA PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 2.683e-17 Identity = 44/88 (50.00%), Postives = 63/88 (71.59%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +R + I++LDEATSALD ESER++Q ALD +T +V+AHRLSTI A I V++DG++ E G+H+ LL N G YA++ ++Q Sbjct: 494 ALLRDSPILILDEATSALDTESERAIQAALDELQKDRTALVIAHRLSTIEKADEILVVEDGRIIERGNHTALLATN--GAYAQLHRMQ 579
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_PSEHT (Lipid A export ATP-binding/permease protein msbA OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=msbA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.504e-17 Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ A I++LDEATSALD ESE+ +Q+AL+ KT+IV+AHRLSTI N+ I VID+G V E G H LL NN G Y+ + ++Q Sbjct: 491 AILKDAPILILDEATSALDTESEKLIQQALEALMKDKTSIVIAHRLSTIENSDRIYVIDNGSVIESGDHLSLLANN--GTYSALCKMQ 576
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_BURTA (Lipid A export ATP-binding/permease protein msbA OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=msbA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.504e-17 Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A + A I++LDEATSALD+ESER VQ AL+ G+TT+V+AHRLSTI A I V++ GK+ E GSH LL+ G YA + ++Q Sbjct: 505 AIYKDAPILILDEATSALDSESERHVQAALETLMKGRTTLVIAHRLSTIERADRILVLEGGKIVESGSHRELLEQG--GLYAHLHRIQ 590
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_BURPS (Lipid A export ATP-binding/permease protein msbA OS=Burkholderia pseudomallei GN=msbA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.504e-17 Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A + A I++LDEATSALD+ESER VQ AL+ G+TT+V+AHRLSTI A I V++ GK+ E GSH LL+ G YA + ++Q Sbjct: 505 AIYKDAPILILDEATSALDSESERHVQAALETLMKGRTTLVIAHRLSTIERADRILVLEGGKIVESGSHRELLEQG--GLYAHLHRIQ 590
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_BURP1 (Lipid A export ATP-binding/permease protein msbA OS=Burkholderia pseudomallei (strain 1710b) GN=msbA PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 3.504e-17 Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A + A I++LDEATSALD+ESER VQ AL+ G+TT+V+AHRLSTI A I V++ GK+ E GSH LL+ G YA + ++Q Sbjct: 505 AIYKDAPILILDEATSALDSESERHVQAALETLMKGRTTLVIAHRLSTIERADRILVLEGGKIVESGSHRELLEQG--GLYAHLHRIQ 590
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_BURMA (Lipid A export ATP-binding/permease protein msbA OS=Burkholderia mallei GN=msbA PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 3.504e-17 Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A + A I++LDEATSALD+ESER VQ AL+ G+TT+V+AHRLSTI A I V++ GK+ E GSH LL+ G YA + ++Q Sbjct: 505 AIYKDAPILILDEATSALDSESERHVQAALETLMKGRTTLVIAHRLSTIERADRILVLEGGKIVESGSHRELLEQG--GLYAHLHRIQ 590
BLAST of FC920628 vs. ExPASy Swiss-Prot
Match: MSBA_SALTY (Lipid A export ATP-binding/permease protein msbA OS=Salmonella typhimurium GN=msbA PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 4.576e-17 Identity = 44/88 (50.00%), Postives = 63/88 (71.59%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +R + I++LDEATSALD ESER++Q ALD +T++V+AHRLSTI A I V++DG + E G+HS LL + G YA++ ++Q Sbjct: 494 ALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQH--GVYAQLHKMQ 579 The following BLAST results are available for this feature:
BLAST of FC920628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920628 ID=FC920628; Name=FC920628; organism=Citrus clementina; type=EST; length=480bpback to top |