FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_TREPS (Seryl-tRNA synthetase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=serS PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 7.666e-58 Identity = 108/229 (47.16%), Postives = 146/229 (63.76%), Query Frame = 1 Query: 34 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGL--GRYGEIS 714 K G P F+F +DH +L + LDI DF+A +VSG KFYYLK E V+LE LI + L + +RGF P TP+I R +V GF PRG+ + +Y IEG +CL+ TAEI +G H +L E LP YA SHCF LYRVHQF+KLEMF +C P +S+ HE L +EE+++++L + F+ V++ DLGAPAYRK+D+EAWMPG G +GE++ Sbjct: 123 KRCGVPPCFSFSPRDHVELARLLDIVDFEAGKKVSGIKFYYLKREGVLLEQALIMFGLQFLQERGFVPFLTPDIAREGMVCGLGFNPRGSGSNIYRIEGEHRCLVATAEITLGAYHAGEVLEERSLPRLYAGLSHCFRKEAGAAGQFSRGLYRVHQFTKLEMFAYCTPSDSECLHERLRSLEEEIFTALEIPFRVVEVCAGDLGAPAYRKWDLEAWMPGRQGGSWGEVT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_TREPA (Seryl-tRNA synthetase OS=Treponema pallidum GN=serS PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 7.666e-58 Identity = 108/229 (47.16%), Postives = 146/229 (63.76%), Query Frame = 1 Query: 34 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGL--GRYGEIS 714 K G P F+F +DH +L + LDI DF+A +VSG KFYYLK E V+LE LI + L + +RGF P TP+I R +V GF PRG+ + +Y IEG +CL+ TAEI +G H +L E LP YA SHCF LYRVHQF+KLEMF +C P +S+ HE L +EE+++++L + F+ V++ DLGAPAYRK+D+EAWMPG G +GE++ Sbjct: 123 KRCGVPPCFSFSPRDHVELARLLDIVDFEAGKKVSGIKFYYLKREGVLLEQALIMFGLQFLQERGFVPFLTPDIAREGMVCGLGFNPRGSGSNIYRIEGEHRCLVATAEITLGAYHAGEVLEERSLPRLYAGLSHCFRKEAGAAGQFSRGLYRVHQFTKLEMFAYCTPSDSECLHERLRSLEEEIFTALEIPFRVVEVCAGDLGAPAYRKWDLEAWMPGRQGGSWGEVT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_RHOBA (Seryl-tRNA synthetase OS=Rhodopirellula baltica GN=serS PE=3 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 9.371e-56 Identity = 105/237 (44.30%), Postives = 152/237 (64.14%), Query Frame = 1 Query: 1 PVGGE-DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGE 708 P GGE D + I + +F DH QLG+ D+FDF+ A V+GS FY+L+N AV L++ L + +S + +GFTP++TP++ +SV++ GF PRG TQ+YSIE + L+ TAEIP+GG+ IL+ LPL+Y SHCF LYRVHQF+K+EMF F P++S + HEE+ +E +++ +L + ++ +D AT DLG PAYRK+D+EAWMPG G G+ Sbjct: 111 PEGGEHDANEIGRGKTPVPEMDFQPLDHLQLGEKHDLFDFEGGARVAGSGFYFLRNAAVRLDLALQQFAISHLAGKGFTPVSTPDLALTSVLQGTGFNPRGPETQIYSIENTELNLVATAEIPLGGMLSGQILASEELPLRYCGLSHCFRTEAGAAGRASKGLYRVHQFTKVEMFAFTLPDQSTAMHEEMRELECEIFDALEVPYRVIDTATGDLGGPAYRKYDLEAWMPGRGESGD 347
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS1_STRAW (Seryl-tRNA synthetase 1 OS=Streptomyces avermitilis GN=serS1 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.980e-49 Identity = 98/241 (40.66%), Postives = 146/241 (60.58%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVGGE+ ++ +T G F F KDH +LG+AL D + A+VSGS+FYYL +LE+ L+N +++ + GF P+ TP +VR +E GF + A+ VY +E D L+GT+E+P+ HMD IL LP++YA FS CF ++RVHQF K+EMF + PE++++ H+ L+ E+ + L L F+ +D+A+ DLGA A RKFD EAW+P G+Y E++ Sbjct: 111 PVGGEEDFVVLETHGTIRDFGAEGFEPKDHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLELALVNAAIAQATEAGFIPMLTPALVRPRAMEGTGFLGQ-ASENVYHLEKDDYYLVGTSEVPLAAYHMDEILDADKLPMRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEDAENEHKRLLEWEKQWLTGLELPFQVIDVASGDLGASATRKFDCEAWIPTQGKYRELT 350
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_PROAC (Seryl-tRNA synthetase OS=Propionibacterium acnes GN=serS PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 8.495e-49 Identity = 95/241 (39.42%), Postives = 145/241 (60.17%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED +I++TVG P F F KDH ++G+AL D + ++SGS+FY L LE L+N +S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ + H D IL ++ LP +Y AFS C+ ++RVH F K+EMFV+C P+E++++HE+L+ E+D ++L + F+ +D+A+ DLG A RKFD W+P RY EI+ Sbjct: 111 PAGGEDEGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVALAAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHEKLLSFEKDFITALQIPFQVLDVASGDLGLSAARKFDCYGWLPTQNRYREIT 350
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYSM_MOUSE (Seryl-tRNA synthetase, mitochondrial OS=Mus musculus GN=Sars2 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 8.495e-49 Identity = 97/243 (39.92%), Postives = 149/243 (61.32%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG E + + + VG F+F + H ++G+ LDI + VSG + YYL+ +L+ GL+N+TLS+++ RGFTP+T P+++R +V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++ S C+ LYRVH F+K+EMF P E+S +E + ++ ++ + LGLHF+ +DM T++LG PAYRKFD+EAWMPG GRYGE++ Sbjct: 179 PVGDESQARVVRVVGEKPAFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGAVLQHGLVNFTLSKLVSRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPVRMVCASTCY-RAETDTGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSQLLDEFLSLQVEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRYGEVT 420
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYSM_HUMAN (Seryl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=SARS2 PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 8.495e-49 Identity = 97/243 (39.92%), Postives = 150/243 (61.73%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG E + + VG+ VF+F + H ++G+ LDI + VSG + YYL+ +L+ GL+N+T +++++RGFTP+T P+++R +V E CG P +Q+Y+I+ A D L GTAE+ + G MD ++ LP++ S C+ LYRVH F+K+EMF P E+S EE + ++ ++ + LGLHF+ +DM T++LG PAYRKFD+EAWMPG GR+GE++ Sbjct: 179 PVGDESQARVLHMVGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRMVCSSTCY-RAETNTGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVT 420
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_STRGG (Seryl-tRNA synthetase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=serS PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.449e-48 Identity = 97/241 (40.25%), Postives = 144/241 (59.75%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVGGE+ ++ +T G F F KDH +LG+AL D + A+VSGS+FYYL +LE+ L+N +++ + GF P+ TP +VR +E GF + A VY +E D L+GT+E+P+ HMD I+ LPL+YA FS CF ++RVHQF K+EMF + P ++++ H L+ E+ ++L L F+ +D+AT DLG+ A RKFD EAW+P G+Y E++ Sbjct: 111 PVGGEEDFVVLETHGTIRDFGAEGFEPKDHLELGEALGAIDMERGAKVSGSRFYYLTGVGALLELALVNAAIAQATEAGFVPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYHMDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVDPADAEAEHRRLLDWEKQWLTALELPFQVIDVATGDLGSSASRKFDCEAWIPTQGKYRELT 350
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_NOCSJ (Seryl-tRNA synthetase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=serS PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.228e-48 Identity = 97/241 (40.25%), Postives = 139/241 (57.68%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED ++ + +G P F F +DH +LG+ L D D A+VSGS+FY+L LE+ L+N + + + GFTP+ P +V+ ++ GF + A+ VY IEG D L+GT+E+P+ H D IL LPL+YAAFS CF + RVH F K+EMFV+ EES + H+ L+ E++ L L ++ +D+A DLG A RKFD EAW+P GRY E++ Sbjct: 111 PAGGEDDYVVLEEIGTPRDFAADGFEPRDHIELGRMLGAIDLDRGAKVSGSRFYFLTGAGAELELALVNLAMQQARESGFTPVIAPSMVKPRAMDGTGFLGQAAD-DVYRIEGQDMYLVGTSEVPMAAYHSDEILDGGALPLRYAAFSPCFRKEAGSHGKDTKGIIRVHWFDKVEMFVYTTTEESYAEHQRLLAWEKEFLEKLELAYRVIDVAAGDLGLSAQRKFDCEAWIPTQGRYRELT 350
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_NOCFA (Seryl-tRNA synthetase OS=Nocardia farcinica GN=serS PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.228e-48 Identity = 92/238 (38.66%), Postives = 143/238 (60.08%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED ++ +TVG P F+F KDH +LG+AL + D + A+VSGS+FY+L +L++GL+ + + GFT + P +VR V+ GF R A +VY + D L+GT+E+P+ G H D IL S P +YA +S CF + RVHQF K+EMFV+ P+++++ HE L+ E ++ +++ + ++ +D+A DLG+ A RKFD EAW+P Y E++ Sbjct: 111 PAGGEDDYVVLETVGTPPEFDFEPKDHLELGEALGLMDMERGAKVSGSRFYFLTGHGALLQLGLLQLAAQKAVANGFTMMIPPVLVRPEVMAGTGFLGRHA-AEVYHLADDDMYLVGTSEVPLAGYHADEILDLSAGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVYTTPDQAEAEHERLLAWEREMLAAIEVPYRIIDVAAGDLGSSAARKFDCEAWVPSQQTYRELT 347 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |