FC920631

Overview
NameFC920631
Unique NameFC920631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BACC7 (Seryl-tRNA synthetase OS=Bacillus cereus (strain AH187) GN=serS PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 87/240 (36.25%), Postives = 127/240 (52.92%), Query Frame = 1 
Query:    1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714
            PVG  ED +++ +T G    F F  K H+ L   L I DF+ A +V+GS+F + K     LE  LI++ L     + G+  +  P +V  + +   G  P+      + IE  D  LI TAE+PV  +H D IL++  LP++YAAFS CF             L R HQF+K+E+  F +PE+S    E+L    E +   L L ++ + M T DLG  A +K+D+E W+P  G Y EIS
Sbjct:  113 PVGETEDDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNMHRDEILNKDQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREIS 351
[Close]
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BACC3 (Seryl-tRNA synthetase OS=Bacillus cereus (strain 03BB102) GN=serS PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 87/240 (36.25%), Postives = 127/240 (52.92%), Query Frame = 1 
Query:    1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714
            PVG  ED +++ +T G    F F  K H+ L   L I DF+ A +V+GS+F + K     LE  LI++ L     + G+  +  P +V  + +   G  P+      + IE  D  LI TAE+PV  +H D IL++  LP++YAAFS CF             L R HQF+K+E+  F +PE+S    E+L    E +   L L ++ + M T DLG  A +K+D+E W+P  G Y EIS
Sbjct:  113 PVGETEDDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREIS 351
[Close]
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BACC1 (Seryl-tRNA synthetase OS=Bacillus cereus (strain ATCC 10987) GN=serS PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 87/240 (36.25%), Postives = 127/240 (52.92%), Query Frame = 1 
Query:    1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714
            PVG  ED +++ +T G    F F  K H+ L   L I DF+ A +V+GS+F + K     LE  LI++ L     + G+  +  P +V  + +   G  P+      + IE  D  LI TAE+PV  +H D IL++  LP++YAAFS CF             L R HQF+K+E+  F +PE+S    E+L    E +   L L ++ + M T DLG  A +K+D+E W+P  G Y EIS
Sbjct:  113 PVGETEDDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLXNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREIS 351
[Close]
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BACC0 (Seryl-tRNA synthetase OS=Bacillus cereus (strain AH820) GN=serS PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 87/240 (36.25%), Postives = 127/240 (52.92%), Query Frame = 1 
Query:    1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714
            PVG  ED +++ +T G    F F  K H+ L   L I DF+ A +V+GS+F + K     LE  LI++ L     + G+  +  P +V  + +   G  P+      + IE  D  LI TAE+PV  +H D IL++  LP++YAAFS CF             L R HQF+K+E+  F +PE+S    E+L    E +   L L ++ + M T DLG  A +K+D+E W+P  G Y EIS
Sbjct:  113 PVGETEDDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREIS 351
[Close]
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BACAN (Seryl-tRNA synthetase OS=Bacillus anthracis GN=serS PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 87/240 (36.25%), Postives = 127/240 (52.92%), Query Frame = 1 
Query:    1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714
            PVG  ED +++ +T G    F F  K H+ L   L I DF+ A +V+GS+F + K     LE  LI++ L     + G+  +  P +V  + +   G  P+      + IE  D  LI TAE+PV  +H D IL++  LP++YAAFS CF             L R HQF+K+E+  F +PE+S    E+L    E +   L L ++ + M T DLG  A +K+D+E W+P  G Y EIS
Sbjct:  113 PVGETEDDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREIS 351
[Close]
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BACAH (Seryl-tRNA synthetase OS=Bacillus thuringiensis (strain Al Hakam) GN=serS PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 87/240 (36.25%), Postives = 127/240 (52.92%), Query Frame = 1 
Query:    1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714
            PVG  ED +++ +T G    F F  K H+ L   L I DF+ A +V+GS+F + K     LE  LI++ L     + G+  +  P +V  + +   G  P+      + IE  D  LI TAE+PV  +H D IL++  LP++YAAFS CF             L R HQF+K+E+  F +PE+S    E+L    E +   L L ++ + M T DLG  A +K+D+E W+P  G Y EIS
Sbjct:  113 PVGETEDDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREIS 351
[Close]
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BACAC (Seryl-tRNA synthetase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=serS PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 87/240 (36.25%), Postives = 127/240 (52.92%), Query Frame = 1 
Query:    1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714
            PVG  ED +++ +T G    F F  K H+ L   L I DF+ A +V+GS+F + K     LE  LI++ L     + G+  +  P +V  + +   G  P+      + IE  D  LI TAE+PV  +H D IL++  LP++YAAFS CF             L R HQF+K+E+  F +PE+S    E+L    E +   L L ++ + M T DLG  A +K+D+E W+P  G Y EIS
Sbjct:  113 PVGETEDDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREIS 351
[Close]
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BACAA (Seryl-tRNA synthetase OS=Bacillus anthracis (strain A0248) GN=serS PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 87/240 (36.25%), Postives = 127/240 (52.92%), Query Frame = 1 
Query:    1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714
            PVG  ED +++ +T G    F F  K H+ L   L I DF+ A +V+GS+F + K     LE  LI++ L     + G+  +  P +V  + +   G  P+      + IE  D  LI TAE+PV  +H D IL++  LP++YAAFS CF             L R HQF+K+E+  F +PE+S    E+L    E +   L L ++ + M T DLG  A +K+D+E W+P  G Y EIS
Sbjct:  113 PVGETEDDNVVARTWGEVKEFAFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREIS 351
[Close]
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BACCR (Seryl-tRNA synthetase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=serS PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.346e-35
Identity = 86/240 (35.83%), Postives = 127/240 (52.92%), Query Frame = 1 
Query:    1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714
            PVG  ED +++ +T G    F +  K H+ L   L I DF+ A +V+GS+F + K     LE  LI++ L     + G+  +  P +V  + +   G  P+      + IE  D  LI TAE+PV  +H D IL++  LP++YAAFS CF             L R HQF+K+E+  F +PE+S    E+L    E +   L L ++ + M T DLG  A +K+D+E W+P  G Y EIS
Sbjct:  113 PVGETEDDNVVARTWGEVKEFTYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREIS 351
[Close]
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BACC4 (Seryl-tRNA synthetase OS=Bacillus cereus (strain B4264) GN=serS PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.346e-35
Identity = 86/240 (35.83%), Postives = 127/240 (52.92%), Query Frame = 1 
Query:    1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714
            PVG  ED +++ +T G    F +  K H+ L   L I DF+ A +V+GS+F + K     LE  LI++ L     + G+  +  P +V  + +   G  P+      + IE  D  LI TAE+PV  +H D IL++  LP++YAAFS CF             L R HQF+K+E+  F +PE+S    E+L    E +   L L ++ + M T DLG  A +K+D+E W+P  G Y EIS
Sbjct:  113 PVGETEDDNVVARTWGEVKEFTYEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYREIS 351
The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SYS_BACC74.093e-3536.25Seryl-tRNA synthetase OS=Bacillus cereus (strain A... [more]
SYS_BACC34.093e-3536.25Seryl-tRNA synthetase OS=Bacillus cereus (strain 0... [more]
SYS_BACC14.093e-3536.25Seryl-tRNA synthetase OS=Bacillus cereus (strain A... [more]
SYS_BACC04.093e-3536.25Seryl-tRNA synthetase OS=Bacillus cereus (strain A... [more]
SYS_BACAN4.093e-3536.25Seryl-tRNA synthetase OS=Bacillus anthracis GN=ser... [more]
SYS_BACAH4.093e-3536.25Seryl-tRNA synthetase OS=Bacillus thuringiensis (s... [more]
SYS_BACAC4.093e-3536.25Seryl-tRNA synthetase OS=Bacillus anthracis (strai... [more]
SYS_BACAA4.093e-3536.25Seryl-tRNA synthetase OS=Bacillus anthracis (strai... [more]
SYS_BACCR5.346e-3535.83Seryl-tRNA synthetase OS=Bacillus cereus (strain A... [more]
SYS_BACC45.346e-3535.83Seryl-tRNA synthetase OS=Bacillus cereus (strain B... [more]

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Properties
Property NameValue
Genbank descriptionC32011A06EF RVDevelop1 Citrus clementina cDNA clone C32011A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bp
CCCGTAGGAGGGGAGGATTGTTCTATAATTAGAAAAACGGTTGGTAACCC
CAGTGTGTTTAACTTCCCTGTCAAGGATCACTTTCAGCTTGGGAAAGCAC
TCGATATCTTTGATTTTGATGCAGCTGCAGAGGTCAGTGGTTCAAAATTC
TATTACCTGAAGAATGAAGCTGTTATGCTAGAGATGGGTCTTATCAACTG
GACACTCTCAGAAGTGATAAAAAGGGGATTTACACCTCTAACTACTCCTG
AAATTGTAAGATCCTCTGTTGTTGAAAAGTGTGGCTTCCAACCTCGTGGA
GCAAATACCCAGGTTTATTCTATCGAGGGAGCTGATCAATGCCTCATTGG
CACTGCAGAGATTCCTGTTGGAGGAATTCATATGGATTCTATTCTTTCTG
AGTCATTGTTGCCTTTAAAGTATGCAGCGTTTTCCCATTGCTTCCGTACT
GAGGCAGGTGCGGCAGGCACAGCAACAAGGGGTCTTTATCGAGTTCACCA
GTTCAGCAAACTGGAGATGTTCGTCTTTTGCCAACCAGAGGAGAGTGATT
CATACCATGAGGAGCTCATTAGAATTGAAGAAGACCTTTACTCATCACTA
GGATTACACTTCAAAACTGTAGACATGGCTACTGAAGATTTAGGTGCCCC
GGCTTATCGAAAATTTGATGTGGAAGCATGGATGCCAGGCTTGGGACGAT
ATGGCGAGATATCAGTGCATCAACTGTACGGACTAT
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