FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_DESAA (Seryl-tRNA synthetase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=serS PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.719e-34 Identity = 83/240 (34.58%), Postives = 128/240 (53.33%), Query Frame = 1 Query: 1 PVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG E+ ++ K G P F+F + H+ +G+ L I DF+ AA ++GS+F + ++E LIN+ L + + G+ + P IV + G P+ ++ +EG + LI TAE+PV IH + IL E LPL Y AF+ CF L R HQF+K+EM F P+ S E +++ E + LGL ++ +++ T D+G A + +D+E WMP G Y EIS Sbjct: 112 PVGKDENDNVEVKRRGEPRNFDFEPQAHWDIGEGLGILDFERAARITGSRFPLYFGDGALMERALINFMLMTHTTRHGYKEVLPPFIVNRKTMTGTGQLPK-FEEDLFKLEGWEYFLIPTAEVPVTNIHAEEILEEEALPLYYTAFTPCFRSEAGSAGKDTRGLIRQHQFNKVEMVKFSHPDNSYDELEGMLQNAETILQELGLPYRVLNLCTGDIGFGAAKTYDLEVWMPQQGVYREIS 350
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_CLOPE (Seryl-tRNA synthetase OS=Clostridium perfringens GN=serS PE=3 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 7.719e-34 Identity = 80/228 (35.09%), Postives = 120/228 (52.63%), Query Frame = 1 Query: 34 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSE-VIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 K G P+ FNF K H+ LG LD+ DF+ +V+GS+F K LE +IN+ L + + G+T + P +V + G P+ + +E LI TAE+PV ++ + L LP+K+AA+S CF L R HQF+K+E+ FC+PE+S ++L++ E + LGL ++ V + DLG A K+D+E WMP RY EIS Sbjct: 127 KRWGEPTKFNFEPKAHWDLGTDLDLLDFERGGKVAGSRFTVYKGMGARLERSIINYFLDKHTFENGYTEVLPPYMVNRDSMTGTGQLPK-FEEDAFKVENNGYFLIPTAEVPVTNMYRNETLEGDKLPIKHAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFCKPEQSYEELDKLVQDAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVWMPSYNRYVEIS 353
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_CLOP1 (Seryl-tRNA synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=serS PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.719e-34 Identity = 80/228 (35.09%), Postives = 120/228 (52.63%), Query Frame = 1 Query: 34 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSE-VIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 K G P+ FNF K H+ LG LD+ DF+ +V+GS+F K LE +IN+ L + + G+T + P +V + G P+ + +E LI TAE+PV ++ + L LP+K+AA+S CF L R HQF+K+E+ FC+PE+S ++L++ E + LGL ++ V + DLG A K+D+E WMP RY EIS Sbjct: 127 KRWGEPTKFNFEPKAHWDLGTDLDLLDFERGGKVAGSRFTVYKGMGARLERSIINYFLDKHTFENGYTEVLPPYMVNRDSMTGTGQLPK-FEEDAFKVENNGYFLIPTAEVPVTNMYRNETLEGDKLPIKHAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFCKPEQSYEELDKLVQDAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVWMPSYNRYVEIS 353
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_ALKMQ (Seryl-tRNA synthetase OS=Alkaliphilus metalliredigens (strain QYMF) GN=serS PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.719e-34 Identity = 85/235 (36.17%), Postives = 127/235 (54.04%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 +D +I +T G P+ F+F K H+++G L I DF+AA++V+GS+F + A LE LI++ L + G+T L P +V + + G P+ + I D L+ TAE+PV I+ D I+ LP+KY A++ CF L R HQF+K+E+ F +PE+S E+L E + LGL ++ V + T DLG A K+D+E WMP RY EIS Sbjct: 118 DDDNIEVRTWGEPTQFSFEPKPHWEVGVNLGILDFEAASKVTGSRFTLYRGMAARLERALISFMLDLHTDEHGYTELLPPFMVNRASMIGTGQLPK-FEEDAFKIPQKDYFLVPTAEVPVTNIYRDDIIEGDQLPIKYVAYTPCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVRPEDSYEELEKLTNNAEKVLQLLGLPYRIVRICTGDLGFTAAFKYDIEVWMPSYNRYVEIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_CLOPS (Seryl-tRNA synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=serS PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.008e-33 Identity = 79/228 (34.65%), Postives = 120/228 (52.63%), Query Frame = 1 Query: 34 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSE-VIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 K G P+ FNF K H+ LG LD+ DF+ +++GS+F K LE +IN+ L + + G+T + P +V + G P+ + +E LI TAE+PV ++ + L LP+K+AA+S CF L R HQF+K+E+ FC+PE+S ++L++ E + LGL ++ V + DLG A K+D+E WMP RY EIS Sbjct: 127 KRWGEPTKFNFEPKAHWDLGTDLDLLDFERGGKIAGSRFTVYKGMGARLERSIINYFLDKHTFENGYTEVLPPYMVNRDSMTGTGQLPK-FEEDAFKVENNGYFLIPTAEVPVTNMYRNETLEGDKLPIKHAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFCKPEQSYEELDKLVQDAESVLQGLGLPYRIVRICKGDLGFTAALKYDIEVWMPSYNRYVEIS 353
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_SULAC (Seryl-tRNA synthetase OS=Sulfolobus acidocaldarius GN=serS PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.317e-33 Identity = 75/215 (34.88%), Postives = 117/215 (54.42%), Query Frame = 1 Query: 67 PVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 PV L L + D A EV+ S+FYYL N+ V L++ L+ + + + RG+T + P ++R V+ K +Y IEG D LI TAE + ++ + + LPLK S F ++RVHQF K+E F+F PE+S YHEE+I E+++ LGL ++ +++A+ DLGAPA +K+D+E WMP ++ E+ Sbjct: 158 PVGHADMLENVLRLGDTKKAGEVAASRFYYLFNDIVWLDLALLLYAIDTITSRGYTLVLPPYMLRGEVI-KSVIDLDTFKDAIYKIEGEDLYLIATAEHSIAALYYKEEIPKEELPLKLVGVSPAFRKEAGAANKDLKGIFRVHQFHKVEQFIFSSPEDSWKYHEEMIENAEEIFRGLGLPYRVINIASGDLGAPAAKKYDLEVWMPAQAKFREM 371
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_ANATD (Seryl-tRNA synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=serS PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.317e-33 Identity = 86/240 (35.83%), Postives = 127/240 (52.92%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG +D + + G +F +K H+++G L I DF+ A++VSGS+F + + LE LIN+ L + K G+T L P +V + G P+ + + D LI TAE+PV H + IL E LP+KY A+S CF L R HQF+K+E+ F +PE+S E+L ED+ LGL ++ V + + DLG + + +D+E WMP GRY EIS Sbjct: 112 PVGKDDTENVEVRRWGEVREPDFEIKPHWEIGVNLGILDFERASKVSGSRFTFYRGLGARLERALINFMLDLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTTD--DYFLIPTAEVPVTNYHREEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFTKPEDSYDELEKLTADAEDVLKELGLPYRVVLLCSGDLGFSSAKTYDIEVWMPSYGRYVEIS 349
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_CHLPN (Seryl-tRNA synthetase OS=Chlamydia pneumoniae GN=serS PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.720e-33 Identity = 81/229 (35.37%), Postives = 124/229 (54.15%), Query Frame = 1 Query: 34 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL--IGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 K+VG+ +F+FP K H +L + LDI DF AAA+ +GS + KN V+LE L+ + L + GF P +V+ ++ G P+ + Q Y +E +Q L I TAE+ + G IL+E LPL YAA + CF L RVHQF K+EMF F P + D +E+++ I E++ + L L ++ ++T D+ A + D E W+PG + E+S Sbjct: 124 KSVGDLPIFSFPPKHHLELNQELDILDFQAAAKTTGSGWPAYKNRGVLLEWALLTYMLQKQAAHGFQLWLPPLLVKKEILFGSGQIPK-FDGQYYRVEDGEQYLYLIPTAEVVLNGFRSQDILTEKELPLYYAACTPCFRREAGAAGAQERGLVRVHQFHKVEMFAFTTPNQDDIAYEKMLSIVEEMLTELKLPYRLSLLSTGDMSFTASKTIDAEVWLPGQKAFYEVS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_CENSY (Seryl-tRNA synthetase OS=Cenarchaeum symbiosum GN=serS PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.720e-33 Identity = 80/229 (34.93%), Postives = 125/229 (54.59%), Query Frame = 1 Query: 25 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 ++RK VG P+ + P K H +L + D AA+VSG++FYYLK V L LI+ +L + RG+T + P ++R + +E +Y IE D LIGT+E + +H D I+ E LPL+YA S CF ++RVHQF K+E FVF +PE+S H+ ++ I E+ Y LG+ ++ V +++ D+G + + +D+E WM Y E+ Sbjct: 122 VLRKWVGTPTP-SVP-KGHEELAVGRGLLDMKRAAKVSGARFYYLKGSLVRLNQALISHSLDFLGSRGYTLVQPPYLIRRNAMEGA-IIAEDFEDVIYKIEDDDLYLIGTSEHAMAAMHSDEII-EGGLPLRYAGVSPCFRKEAGAHGKDQKGIFRVHQFDKIEQFVFSKPEDSWREHDRMLEITEEFYQGLGIPYRVVLLSSGDMGKVSAKTYDIECWMAAQDAYREV 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_PROMS (Seryl-tRNA synthetase OS=Prochlorococcus marinus (strain AS9601) GN=serS PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.246e-33 Identity = 80/239 (33.47%), Postives = 128/239 (53.56%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P+G ++ ++ KT G+P + +K H+++G++L+IFD + ++S S+F L LE LIN+ L K G+ L P +V S + G P+ +N + + D L TAE+P+ +H + ++ LPLKY A+S CF L R+HQF+K+E++ FC P +S H+E+ E + L L ++ VD+ T DLG + R FD+E W+P Y EIS Sbjct: 117 PIGKDESENLQIKTWGDPLIKE-NIKSHWEIGESLNIFDSIKSTKISKSRFITLIGNGARLERALINFMLDMHTKNGYLELMPPALVNSESLTGSGQLPKFSN-ESFKCSNDDLWLSPTAEVPLTALHRNELIDPKHLPLKYVAYSPCFRREAGSYGRDTKGLIRLHQFNKVELYWFCDPSKSLEAHKEITTDAESILKKLNLPYRLVDICTGDLGFSSSRTFDLEVWLPSSKCYREIS 353 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |