FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_CLAMS (Seryl-tRNA synthetase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=serS PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.341e-45 Identity = 88/238 (36.97%), Postives = 141/238 (59.24%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED + + VG + F+F +DH ++G+ LD D A+VSG++F++LK LE+ L+N+ L+ ++ G PL TP +V+ ++ GF A+ +VY ++ D L GT+E+ + G H D IL + P++YA +S C+ + RVHQF KLEMF + P ++++ HE L+ ++E + LGL ++ +D A DLG+ A RK+DVEAW+P G Y E++ Sbjct: 111 PAGGEDDWALLREVGEKAAFDFEPRDHLEIGEILDAIDMGRGAKVSGARFHFLKGIGARLEIALMNFGLARALEAGLVPLITPTLVKPEIMAGTGFLGAHAD-EVYHLDDDDLYLTGTSEVALAGYHADEILDLAAGPIRYAGWSTCYRKEAGSYGKDTRGIIRVHQFQKLEMFSYVDPADAEAEHERLLAMQERMMQDLGLAYRVIDTAAGDLGSSAARKYDVEAWIPTQGAYRELT 347
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCUA (Seryl-tRNA synthetase OS=Mycobacterium ulcerans (strain Agy99) GN=serS PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.698e-45 Identity = 89/238 (37.39%), Postives = 140/238 (58.82%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED + VG P + P KDH +LG++L + D A+V+GS+FY+L + +L++GL+ L + GF P+ P +VR V+ GF A+ +VY +E D L+GT+E+P+ G H D I+ S PL+YA +S CF + RVHQF K+E FV+C P ++++ H+ L+ + ++ + + + ++ +D+A DLGA A RKFD EAW+P G Y E++ Sbjct: 111 PAGGEDDYAVLDVVGEPRALDNP-KDHLELGESLGLIDMARGAKVAGSRFYFLTGQGALLQLGLLQLALRLAVDNGFIPMIPPVLVRPEVMAGTGFLGAHAD-EVYRLEADDLYLVGTSEVPMAGYHADEIVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCAPADAEAEHQRLLAWQREMLAQIEVPYRVIDVAAGDLGASAARKFDCEAWVPTQGTYRELT 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_ARTS2 (Seryl-tRNA synthetase OS=Arthrobacter sp. (strain FB24) GN=serS PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.720e-45 Identity = 91/239 (38.08%), Postives = 138/239 (57.74%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVF-NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED I+ KTVG P F +F KDH ++G+ + D + A+VSGS+FY+L+ LEM L+ + + I GF P+ TP +VR ++ GF + + ++Y + D L+GT+E+ + G H D IL S P++YA S C+ + RVHQF+K+EMF++ EE+ + HE L+ EE++ + L ++ +D A DLG A RKFD EAW+P G Y E++ Sbjct: 111 PEGGEDDYIVVKTVGEPREFPDFEPKDHLEIGELIGAIDMERGAKVSGSRFYFLRGVGARLEMALLQMAMEQAIDAGFIPMITPTLVRPETMQGTGFDVKH-DAEIYRLAEDDLYLVGTSEVALAGYHADEILDLSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAEHERLLAWEEEMLAKCELPYRVIDTAAGDLGNSAARKFDCEAWVPTQGAYRELT 348
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_CORK4 (Seryl-tRNA synthetase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=serS PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.269e-44 Identity = 84/238 (35.29%), Postives = 145/238 (60.92%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGE+ ++ + VG P F+F KDH +LG++L I D + A+VSGS+FY+LK +L++G++ + ++ GF + TP IV + GF + A+ ++Y ++ +Q L+GT+E+ + G H I+ S P +YA +S CF + RVHQF K+EMF +C+PE++ + H++L+ +E ++ +++ + ++ +D+A DLG+ A RKFD EAW+P Y E++ Sbjct: 114 PAGGEEDFVVVEKVGTPPQFDFEPKDHLELGESLGIIDMERGAKVSGSRFYFLKGAGALLQLGMLQLAAQKAVQHGFELMITPVIVNPESMSGTGFLGQHAD-EIYYLQEDNQYLVGTSEVALAGYHSKEIIDLSAGPKRYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFSYCKPEDAAAEHQKLLSMEREMLAAVEVPYRIIDVAGGDLGSSAARKFDTEAWVPTQNTYRELT 350
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_LEIXX (Seryl-tRNA synthetase OS=Leifsonia xyli subsp. xyli GN=serS PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.658e-44 Identity = 93/238 (39.08%), Postives = 139/238 (58.40%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED + K VG F F +DH LG+ L D A+VSG++F +L+ LE+ L+N L + + GF PL TP +V+ V++ GF ++ +VY +E D L GT+E+ + G H D IL + PL+YA +S C+ + RVHQF+KLEMFV+ PE +++ H L+ +E++ +LGL ++ +D A DLG+ A RK+DVEAW+P GRY E++ Sbjct: 111 PSGGEDDYAVLKEVGGIPAFGFEPRDHLALGELLGAIDMARGAKVSGARFSFLRGLGARLEIALMNLALDKALANGFVPLITPTLVKPEVMQGTGFLGEHSD-EVYHLETDDLYLTGTSEVALAGYHADEILDVTE-PLRYAGWSTCYRREAGSAGKDTRGIIRVHQFTKLEMFVYTLPEHAEAEHARLLAWQEEMMQALGLSYRVIDTAAGDLGSSAARKYDVEAWIPTQGRYRELT 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCA1 (Seryl-tRNA synthetase OS=Mycobacterium avium (strain 104) GN=serS PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.165e-44 Identity = 89/238 (37.39%), Postives = 139/238 (58.40%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED + VG P+ P +DH +LG++L + D A+VSGS+FY+L + +L++GL+ L ++ GF P+ P +VR V+ GF A +VY IE D L+GT+E+P+ G H D IL S PL+YA +S CF + RVHQF K+E FV+C P ++++ H+ L+ + ++ + + + ++ +D+A DLG+ A RKFD EAW+P Y E++ Sbjct: 111 PAGGEDDFAVLDVVGEPTALENP-RDHLELGESLGLIDMARGAKVSGSRFYFLTGKGALLQLGLLQLALRLAVENGFVPMIPPVLVRPEVMAGTGFLGAHAE-EVYRIEADDLYLVGTSEVPLAGYHADEILDLSAGPLRYAGWSSCFRREAGSYGKDTRGVIRVHQFDKVEGFVYCTPADAEAEHQRLLGWQREMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWVPTQQTYRELT 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCTU (Seryl-tRNA synthetase OS=Mycobacterium tuberculosis GN=serS PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.828e-44 Identity = 91/238 (38.24%), Postives = 134/238 (56.30%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED + VG PS P KDH +LG++L + D A+VSGS+FY+L +L++GL+ L + GF P P +VR V+ GF A +VY +EG L+GT+E+P+ G H IL S PL+YA +S CF + RVHQF K+E FV+C P +++ HE L+ + + + + + ++ +D+A DLG+ A RKFD EAW+P G Y E++ Sbjct: 111 PAGGEDDYAVLDVVGEPSYLENP-KDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAE-EVYRVEGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQGAYRELT 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCTA (Seryl-tRNA synthetase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=serS PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.828e-44 Identity = 91/238 (38.24%), Postives = 134/238 (56.30%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED + VG PS P KDH +LG++L + D A+VSGS+FY+L +L++GL+ L + GF P P +VR V+ GF A +VY +EG L+GT+E+P+ G H IL S PL+YA +S CF + RVHQF K+E FV+C P +++ HE L+ + + + + + ++ +D+A DLG+ A RKFD EAW+P G Y E++ Sbjct: 111 PAGGEDDYAVLDVVGEPSYLENP-KDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAE-EVYRVEGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQGAYRELT 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCPA (Seryl-tRNA synthetase OS=Mycobacterium paratuberculosis GN=serS PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.828e-44 Identity = 89/238 (37.39%), Postives = 138/238 (57.98%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED + VG P+ P +DH +LG+ L + D A+VSGS+FY+L + +L++GL+ L ++ GF P+ P +VR V+ GF A +VY IE D L+GT+E+P+ G H D IL S PL+YA +S CF + RVHQF K+E FV+C P ++++ H+ L+ + ++ + + + ++ +D+A DLG+ A RKFD EAW+P Y E++ Sbjct: 111 PAGGEDDFAVLDVVGEPTALENP-RDHLELGETLGLIDMARGAKVSGSRFYFLTGKGALLQLGLLQLALRLAVENGFVPMIPPVLVRPEVMAGTGFLGAHAE-EVYRIEADDLYLVGTSEVPLAGYHADEILDLSAGPLRYAGWSSCFRREAGSYGKDTRGVIRVHQFDKVEGFVYCTPADAEAEHQRLLGWQREMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWVPTQQTYRELT 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCBT (Seryl-tRNA synthetase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=serS PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.828e-44 Identity = 91/238 (38.24%), Postives = 134/238 (56.30%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED + VG PS P KDH +LG++L + D A+VSGS+FY+L +L++GL+ L + GF P P +VR V+ GF A +VY +EG L+GT+E+P+ G H IL S PL+YA +S CF + RVHQF K+E FV+C P +++ HE L+ + + + + + ++ +D+A DLG+ A RKFD EAW+P G Y E++ Sbjct: 111 PAGGEDDYAVLDVVGEPSYLENP-KDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAE-EVYRVEGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQGAYRELT 346 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |