FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCBP (Seryl-tRNA synthetase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=serS PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.828e-44 Identity = 91/238 (38.24%), Postives = 134/238 (56.30%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED + VG PS P KDH +LG++L + D A+VSGS+FY+L +L++GL+ L + GF P P +VR V+ GF A +VY +EG L+GT+E+P+ G H IL S PL+YA +S CF + RVHQF K+E FV+C P +++ HE L+ + + + + + ++ +D+A DLG+ A RKFD EAW+P G Y E++ Sbjct: 111 PAGGEDDYAVLDVVGEPSYLENP-KDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAE-EVYRVEGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQGAYRELT 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCBO (Seryl-tRNA synthetase OS=Mycobacterium bovis GN=serS PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.828e-44 Identity = 91/238 (38.24%), Postives = 134/238 (56.30%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED + VG PS P KDH +LG++L + D A+VSGS+FY+L +L++GL+ L + GF P P +VR V+ GF A +VY +EG L+GT+E+P+ G H IL S PL+YA +S CF + RVHQF K+E FV+C P +++ HE L+ + + + + + ++ +D+A DLG+ A RKFD EAW+P G Y E++ Sbjct: 111 PAGGEDDYAVLDVVGEPSYLENP-KDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAE-EVYRVEGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQGAYRELT 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_ARTAT (Seryl-tRNA synthetase OS=Arthrobacter aurescens (strain TC1) GN=serS PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.828e-44 Identity = 89/239 (37.24%), Postives = 137/239 (57.32%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVF-NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED ++ KTVG P F +F KDH ++G+ + D + A+VSGS+FY+L+ LEM L+ + + I GF P+ TP +VR ++ GF + + ++Y + D L+GT+E+ + G H D IL S P++YA S C+ + RVHQF+K+EMF++ EE+ + HE L+ EE++ + L ++ +D A DLG A RKFD EAW+P Y E++ Sbjct: 111 PEGGEDDYVVLKTVGTPREFTDFEPKDHLEIGELIGAIDMERGAKVSGSRFYFLRGVGARLEMALLQMAMEQAIDAGFVPMITPTLVRPETMQGTGFDVKH-DAEIYRLAEDDLYLVGTSEVALAGYHADEILDLSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAEHERLLAWEEEMLAKCELPYRVIDTAAGDLGMSAARKFDCEAWVPTQNAYRELT 348
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_ARTCA (Seryl-tRNA synthetase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=serS PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.693e-44 Identity = 88/239 (36.82%), Postives = 139/239 (58.16%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVF-NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED ++ KTVG P F +F KDH ++G+ + D + A+VSGS+FY+L+ LEM L+ + + I+ GF P+ TP +VR ++ GF + + ++Y + D L+GT+E+ + G H D IL S P++YA S C+ + RVHQF+K+EMF++ EE+ + H+ L+ EE++ + L ++ +D A DLG A RK+D EAW+P G Y E++ Sbjct: 111 PEGGEDDYVVVKTVGTPREFPDFEPKDHLEIGELIGAIDMERGAKVSGSRFYFLRGVGARLEMALLQMAMEQAIEAGFIPMITPTLVRPETMQGTGFDVKH-DAEIYRLAEDDLYLVGTSEVALAGYHADEILDFSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAEHQRLLAWEEEMLAKCELPYRVIDTAAGDLGNSAARKYDCEAWVPTQGAYRELT 348
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_CLAM3 (Seryl-tRNA synthetase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=serS PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.824e-44 Identity = 88/238 (36.97%), Postives = 139/238 (58.40%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED + + VG F+F +DH ++G+ LD D A+VSG++F+YLK LE+ L+N+ L+ ++ G PL TP +V+ ++ GF A+ +VY ++ D L GT+E+ + G H D IL + P++YA +S C+ + RVHQF KLEMF + P ++++ HE L+ ++E + LGL ++ +D A DLG+ A RK+DVEAW+P Y E++ Sbjct: 111 PAGGEDDWALVREVGAKPSFDFAPRDHLEIGEILDAIDMGRGAKVSGARFHYLKGIGARLEIALMNFGLARALEAGLVPLITPTLVKPEIMAGTGFLGAHAD-EVYHLDDDDLYLTGTSEVALAGYHADEILDLAQGPIRYAGWSTCYRKEAGSYGKDTRGIIRVHQFQKLEMFSYVDPADAEAEHERLLAMQERMMQDLGLSYRVIDTAAGDLGSSAARKYDVEAWIPTQDAYRELT 347
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_RHOOB (Seryl-tRNA synthetase OS=Rhodococcus opacus (strain B4) GN=serS PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.300e-44 Identity = 87/239 (36.40%), Postives = 142/239 (59.41%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED I +TVG F+F KDH +LG++L + D + A+VSG++FY+L ML++G++ + + GF + P +VR ++ GF GA++ ++Y + D L+GT+E+P+ G H IL + P +YA +S CF + RVHQF K+EMF +C+PE++D+ H+ L+ E D+ +++ + ++ +D+A DLG+ A RKFD EAW+P Y E++ Sbjct: 111 PAGGEDDFITLETVGEIPAFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGFGAMLQLGMLQLAAQKAMANGFQMMIPPVLVRPEIMAGTGFL--GAHSDEIYHLADDDLYLVGTSEVPLAGYHSGEILDLADGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCKPEDADAEHQRLLAWERDMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQQAYRELT 347
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_RHOSR (Seryl-tRNA synthetase OS=Rhodococcus sp. (strain RHA1) GN=serS PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.075e-43 Identity = 85/238 (35.71%), Postives = 141/238 (59.24%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED + +TVG+ F+F KDH +LG++L + D + A+VSG++FY+L ML++G++ + + GF + P +VR ++ GF A+ +VY + D L+GT+E+P+ G H IL + P +YA +S CF + RVHQF K+EMF +C+PE++D+ H+ L+ E ++ +++ + ++ +D+A DLG+ A RKFD EAW+P Y E++ Sbjct: 111 PAGGEDDFVTLETVGDIPAFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGFGAMLQLGMLQLAAQKAMANGFQMMIPPVLVRPEIMAGTGFLGAHAD-EVYHLADDDLYLVGTSEVPLAGYHSGEILDLADGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCKPEDADAEHQRLLAWEREMLAAIDVPYRVIDVAGGDLGSSAARKFDCEAWVPTQQAYRELT 347
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCSS (Seryl-tRNA synthetase OS=Mycobacterium sp. (strain MCS) GN=serS PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.075e-43 Identity = 86/238 (36.13%), Postives = 139/238 (58.40%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGEDC + VG P + P KDH +LG+AL + D + A+V+GS+FY+L +L++GL+ + GFT + P +VR V+ GF A+ +VY +E D L+GT+E+P+ G H D I+ S P +YA +S CF + RVHQF K+E F++C+PE++ + H+ L+ + ++ + + + ++ +D+A DLG+ A RK+D EAW+P Y E++ Sbjct: 111 PAGGEDCFAVLDVVGEPRAIDDP-KDHLELGEALGLIDMERGAKVAGSRFYFLTGRGALLQLGLMQLAVRLATDNGFTLVIPPVLVRPEVMAGTGFLGAHAD-EVYRLESDDMYLVGTSEVPLAGYHADEIIDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAAAEHDRLLGWQREMLALIEVPYRVIDVAAGDLGSSAARKYDCEAWVPTQQTYRELT 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCSK (Seryl-tRNA synthetase OS=Mycobacterium sp. (strain KMS) GN=serS PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.075e-43 Identity = 86/238 (36.13%), Postives = 139/238 (58.40%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGEDC + VG P + P KDH +LG+AL + D + A+V+GS+FY+L +L++GL+ + GFT + P +VR V+ GF A+ +VY +E D L+GT+E+P+ G H D I+ S P +YA +S CF + RVHQF K+E F++C+PE++ + H+ L+ + ++ + + + ++ +D+A DLG+ A RK+D EAW+P Y E++ Sbjct: 111 PAGGEDCFAVLDVVGEPRAIDDP-KDHLELGEALGLIDMERGAKVAGSRFYFLTGRGALLQLGLMQLAVRLATDNGFTLVIPPVLVRPEVMAGTGFLGAHAD-EVYRLESDDMYLVGTSEVPLAGYHADEIIDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAAAEHDRLLGWQREMLALIEVPYRVIDVAAGDLGSSAARKYDCEAWVPTQQTYRELT 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCSJ (Seryl-tRNA synthetase OS=Mycobacterium sp. (strain JLS) GN=serS PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.075e-43 Identity = 86/238 (36.13%), Postives = 139/238 (58.40%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGEDC + VG P + P KDH +LG+AL + D + A+V+GS+FY+L +L++GL+ + GFT + P +VR V+ GF A+ +VY +E D L+GT+E+P+ G H D I+ S P +YA +S CF + RVHQF K+E F++C+PE++ + H+ L+ + ++ + + + ++ +D+A DLG+ A RK+D EAW+P Y E++ Sbjct: 111 PAGGEDCFAVLDVVGEPRAIDDP-KDHLELGEALGLIDMERGAKVAGSRFYFLTGRGALLQLGLMQLAVRLATDNGFTLVIPPVLVRPEVMAGTGFLGAHAD-EVYRLESDDMYLVGTSEVPLAGYHADEIIDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAAAEHDRLLGWQREMLALIEVPYRVIDVAAGDLGSSAARKYDCEAWVPTQQTYRELT 346 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |