FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_LACRJ (Seryl-tRNA synthetase OS=Lactobacillus reuteri (strain JCM 1112) GN=serS PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.725e-29 Identity = 73/234 (31.20%), Postives = 115/234 (49.15%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 ED ++ + VG F+F K H+ +G+ L I DFD A +VSG++F Y LE + N+ L E +K G+T + P IV + + G P+ VY + G D LI TAE+P+ + ++ LP+ A + F L R+HQF+K+EM + +PE S E++ E++ L L + + + T D+ A D+E WMP +Y E+S Sbjct: 118 EDGAVELRKVGKVRDFDFEPKHHWDIGENLGILDFDRAGKVSGARFVYYLGLGAQLERAVYNFMLDEHMKEGYTEVLPPYIVNADSMYGTGQFPK-FKEGVYQVNGEDMTLIPTAEVPLTNYYRGEVIPTEELPVYVTALTPSFRSEAGAAGRDTRGLIRMHQFNKVEMVKYTKPENSWDELEKMTANAENILKKLNLPYHVITLTTGDMSFTASETHDLELWMPAQNKYREVS 350
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_LACRD (Seryl-tRNA synthetase OS=Lactobacillus reuteri (strain DSM 20016) GN=serS PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.725e-29 Identity = 73/234 (31.20%), Postives = 115/234 (49.15%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 ED ++ + VG F+F K H+ +G+ L I DFD A +VSG++F Y LE + N+ L E +K G+T + P IV + + G P+ VY + G D LI TAE+P+ + ++ LP+ A + F L R+HQF+K+EM + +PE S E++ E++ L L + + + T D+ A D+E WMP +Y E+S Sbjct: 118 EDGAVELRKVGKVRDFDFEPKHHWDIGENLGILDFDRAGKVSGARFVYYLGLGAQLERAVYNFMLDEHMKEGYTEVLPPYIVNADSMYGTGQFPK-FKEGVYQVNGEDMTLIPTAEVPLTNYYRGEVIPTEELPVYVTALTPSFRSEAGAAGRDTRGLIRMHQFNKVEMVKYTKPENSWDELEKMTANAENILKKLNLPYHVITLTTGDMSFTASETHDLELWMPAQNKYREVS 350
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_LACAC (Seryl-tRNA synthetase OS=Lactobacillus acidophilus GN=serS PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.725e-29 Identity = 81/247 (32.79%), Postives = 125/247 (50.61%), Query Frame = 1 Query: 1 PVGGEDC--SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-------EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P+G +D +RK P+ F+F K H+ LG L I D+D A++VSG++F Y +LE + N+ L E K G+T + P +V + ++ G P+ + VY+I + D LI TAE+P+ + I+ E+ LP+ A S F L R+H+F K+EM C+P+ES E+L E L LGL + V ++T D + + +D+E WMP +Y EIS Sbjct: 113 PIGPDDSYNEEVRKWE-EPTKFDFKPKAHWDLGTDLGILDWDRASKVSGARFVYYIGAGALLERAVFNFFLDENTKDGYTEIIPPYLVNDASMQGTGQFPK-FHEDVYTIVDNDDPDKPRDLTLIPTAEVPLVNYFRNEIIHENKLPINVTAMSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKICKPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREIS 357
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_SULNB (Seryl-tRNA synthetase OS=Sulfurovum sp. (strain NBC37-1) GN=serS PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.477e-29 Identity = 69/222 (31.08%), Postives = 117/222 (52.70%), Query Frame = 1 Query: 49 PSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P F+F K+H+ L + DF+ +++ S+F L+ +A LE LIN+ L +RGF P + +++++ G P+ + ++ IE D LI TAE+P+ ++ D IL+E LP+ ++ CF + R HQF K+EM P+ SD + +++ D+ ++LGL + V++ DLG A + D+E W+PG +Y EIS Sbjct: 130 PRSFDFEPKEHWDLAEKNGWIDFERGVKLAKSRFSVLRGDAARLERALINFFLDTNRERGFEEFCVPFMNNAAMLQGTGQLPKFED-DLFKIEDEDLYLIPTAEVPLTNMYHDEILAEIDLPVLMTGYTPCFRKEAGSAGRDTRGMIRQHQFDKVEMVAIAHPDNSDEVFDMMVQNASDILTALGLPHRVVELCGGDLGFSAAKTIDLEVWLPGQNKYREIS 350
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_ROSDO (Seryl-tRNA synthetase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=serS PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.477e-29 Identity = 73/235 (31.06%), Postives = 118/235 (50.21%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 ED ++ + G+ F F K+H+++G DFD AA+ SG++F LK + L + + + V G T + +P +VR + P+ A + G L+ T+EIP+ IL + LP++ A + CF + R HQF K+EM +P++S++ + ++R ED+ LGL ++TV + T D+G A R FD+EAW+PG Y EIS Sbjct: 119 EDDNVEVRRWGHLPDFEFTPKEHYEIGGVAASMDFDTAAKTSGARFVMLKGAVARIHRALSQFMIDTHVDHNGLTEINSPVLVRDDAMYGTDKLPKFAEDSYQTTNG--WWLVSTSEIPLTYTVAGDILDAAALPIRLTAHTLCFRSEAGSAGRDTAGMLRQHQFEKVEMVSITEPDQSEAEQQRMLRCAEDILERLGLPYRTVLLCTGDMGFGARRTFDIEAWLPGQNNYREIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_RICPR (Seryl-tRNA synthetase OS=Rickettsia prowazekii GN=serS PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.477e-29 Identity = 69/215 (32.09%), Postives = 112/215 (52.09%), Query Frame = 1 Query: 73 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKR-GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 K HF+LG L++ DF+ A++SGS+F LK + LE LIN+ + K F ++ P +VR + G P+ + + G LI TAE+ + I D+I+ LP++Y A++ CF + R+HQF K+E+ PEES + HE + E + L L ++ + + T D+G A + +D+E W+PG +Y EI+ Sbjct: 136 KQHFELGTKLNLMDFEQTAKISGSRFVTLKGDLAKLERALINFMIDIHTKEFDFFEISPPFLVRDRAMYNAGQLPKFSEESFITTNGYR--LIPTAEVSLVNIVADTIIQREKLPMRYVAYTTCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESKNEHEYITNASETILKKLDLPYRVMLLCTGDMGFAAKKTYDIEVWLPGQNQYREIA 348
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_ORITI (Seryl-tRNA synthetase OS=Orientia tsutsugamushi (strain Ikeda) GN=serS PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.477e-29 Identity = 74/234 (31.62%), Postives = 121/234 (51.71%), Query Frame = 1 Query: 16 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 D + + K G FP K H+++GK L + DF+ A ++SGS+F LK++ LE LIN+ + + F ++ P +V+ + G P+ A+ + G LI TAE+P+ I ++ L E LP++ AF+ CF + R+HQF K+E+F P+ES+ E L E + LGL ++ V + + D+G A++ +D+E W+P Y EIS Sbjct: 119 DMNKVLKECGTIQNIKFP-KHHYEIGKNLGMMDFNTATKMSGSRFVILKHDLAKLERALINFMIDVHTTEFNFFEVSPPCLVKDHAMYNVGQLPKFADASFETTTGYR--LIPTAEVPLTNIFANTTLLEEKLPIRLVAFTPCFRSEVGSAGKDVKGMLRMHQFGKVELFTIATPKESNREFEYLTAAAEKILEKLGLPYRVVLLCSGDIGFAAHKTYDLEVWLPAQNCYREIS 349
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_GEOLS (Seryl-tRNA synthetase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=serS PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.477e-29 Identity = 77/246 (31.30%), Postives = 127/246 (51.63%), Query Frame = 1 Query: 1 PVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEISVHQLYG 732 PVG E+ ++I ++ G+ F K H+ L + LDI DF+ A +++G++F K LE LI++ L + G+T + P +V + + G P+ ++ + + LI TAE+PV IH D IL +S LP+ Y A++ CF L R HQF+K+E+ F P+ES + E+L E + L L ++ + + + D+G A + +D+E W+P Y EIS +G Sbjct: 111 PVGKSEEENVIVRSWGSLPEMAFEPKPHWDLAEDLDILDFERATKITGARFCLSKRAGARLERALISFMLDLHSTEHGYTEVLPPFMVNRASMTGTGQLPK-FEEDLFRLMDPEYFLIPTAEVPVTNIHRDEILKKSDLPISYTAYTPCFRREAGSYGKDTRGLIRQHQFNKVELVKFVHPDESQAELEKLTGHAEKVLQLLELPYRVMALCSGDIGFSACKTYDLEVWLPSQNTYREISSCSSFG 355
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_RICFE (Seryl-tRNA synthetase OS=Rickettsia felis GN=serS PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.765e-29 Identity = 71/224 (31.70%), Postives = 116/224 (51.79%), Query Frame = 1 Query: 46 NPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKR-GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 NP+ N K HF+LG L++ DF+ A++SG++F LK + LE LIN+ + K F ++ P +VR + + G P+ A + G LI TAE+ + I D+I+ LP++Y A++ CF + R+HQF K+E+ EES + HE + E + L L ++ + + T D+G A + +D+E W+PG +Y EI+ Sbjct: 130 NPNALN---KQHFELGTKLNLMDFEQTAKISGARFVTLKGDLAKLERALINFMIDVHTKEFDFFEISPPVLVRDNAMYNAGQLPKFAEESFATTNGYR--LIPTAEVSLVNIVADTIIPREKLPMRYVAYTPCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTTEESKNEHEYITNASETILQKLNLPYRVMLLCTGDMGFAAKKTYDIEVWLPGQKQYREIA 348
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_JANMA (Seryl-tRNA synthetase OS=Janthinobacterium sp. (strain Marseille) GN=serS PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.765e-29 Identity = 77/247 (31.17%), Postives = 125/247 (50.61%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-------EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG ++ + + VG P F+F ++DH +G AL + DFD AA+++GS+F +K L L + L + + G+T TP IV + ++ G P+ ++++ EG LI TAE+P+ I D I++ LP++ A S CF + R HQF K+EM PE+S +E+ E++ LGL ++ + + T D+G A + +D+E W+P Y EIS Sbjct: 112 PVGTDEAGNVELRKVGTPRSFDFEIRDHVDVGAALGL-DFDVAAKITGSRFSVMKGGIARLHRALAQFMLDTHTAEHGYTECYTPYIVNADSLQGTGQLPK-FEADLFAVKKGGQEGEGEALYLIPTAEVPLTNIVRDEIVAGDALPIRMTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVHPEKSYEALDEMCGHAENILKKLGLPYRVITLCTGDMGFGATKTYDLEVWLPAQNTYREIS 356 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |