FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_RHOPA (Seryl-tRNA synthetase OS=Rhodopseudomonas palustris GN=serS PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.842e-27 Identity = 72/232 (31.03%), Postives = 115/232 (49.57%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ----VYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGR---YGEIS 714 G ++F K H+ LG+AL + DF+AAA++SG++F LK LE + + L G+T + P +V+ + P+ Q G LI TAE+ + + +SIL E LP++ A + CF + R HQF+K+E+ PE+S HE ++ E++ LGLH++ + + T D+G + + +D+E WMPG G Y EIS Sbjct: 129 GEKPSYSFTPKPHYDLGEALGMMDFEAAAKLSGARFTVLKKGLARLERAIGQFFLDVHTGDHGYTEVNPPLLVKDDAMFGTAQLPKFREDQFAAGAIGSGGEGYWLIPTAEVSLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPEQSKDEHERMLSCAEEVLRRLGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYREIS 360
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_RHIEC (Seryl-tRNA synthetase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=serS PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.842e-27 Identity = 73/240 (30.42%), Postives = 123/240 (51.25%), Query Frame = 1 Query: 1 PVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG E + + + VG +N ++HF++G+AL DF+ AA++SGS+F L LE L + + + G+T +++P +VR+ V G P+ + +G + LI TAE+ + + + IL + LPL++ A + F + R HQF K E+ E S + HE + E++ LGLHF+T+ + T D+G + + +D+E W+PG + EIS Sbjct: 114 PVGKDEHDNAVARIVGEKPRWNHTPREHFEIGEALGYMDFERAAKLSGSRFTVLTGPLARLERALGQFMIDLHTREHGYTEVSSPLMVRAEAVFGTGSLPKFEEDLFKTTDG--RYLIPTAEVTLTNLVREEILDQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESSIAEHERMTACAEEVLKRLGLHFRTMTLCTGDMGFGSRKTYDLEVWLPGQNAFREIS 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_PHOPR (Seryl-tRNA synthetase OS=Photobacterium profundum GN=serS PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.842e-27 Identity = 78/244 (31.97%), Postives = 121/244 (49.59%), Query Frame = 1 Query: 1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGA----NTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P G ED ++ G P ++F VKDH LG+ DF +A ++SGS+F +K + L + + L + G+T + P +V + + G P+ +T+ + EG LI TAE+PV + D+I E+ LPLK A + CF L R+HQF K+E+ +PE+S + EEL E + L L ++ V + T D+G A + +D+E W+P Y EIS Sbjct: 114 PAGNDEDENVEISRWGEPKAYDFEVKDHVDLGEMAGGLDFASAVKISGSRFIVMKGQFARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGEDLFHTKPATEEGVGMSLIPTAEVPVTNMVRDTITDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQITKPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGAAKTYDLEVWVPAQNTYREIS 357
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MESSB (Seryl-tRNA synthetase OS=Mesorhizobium sp. (strain BNC1) GN=serS PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.842e-27 Identity = 75/240 (31.25%), Postives = 122/240 (50.83%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG ++ + + VG N+ K+HF++G+AL + DF+ AA++SG++F L LE L + L + G+T + P +VR + G P+ + +G + +I TAE+P+ + + IL LPL+Y A + CF + R HQF K+E+ E + + HE + E++ LGL F+TV + T D+G A + +D+E W+PG Y EIS Sbjct: 119 PVGADENDNVEIRRVGEARQPNW-AKEHFEIGEALGLMDFERAAKLSGARFTVLTGTLARLERALGQFMLDLHTTEHGYTEVQPPLLVRDEALFGTGQLPKFDEDLFRTTDG--RWMIPTAEVPLTNLVREEILDGEKLPLRYTALTPCFRSEAGSAGRDTRGMLRQHQFYKVELVSITDAESALAEHERMTACAEEVLKRLGLPFRTVVLCTGDMGFGAQKTYDIEVWLPGQKTYREIS 355
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_XANCP (Seryl-tRNA synthetase OS=Xanthomonas campestris pv. campestris GN=serS PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.405e-27 Identity = 72/227 (31.72%), Postives = 114/227 (50.22%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD--QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 G P F+F VKDH +LG D + AA++SG++F L+ L L + L V + G+ P +V + + G P+ + ++ E D + LI T+E+P+ I D+I+ LPL+ A S CF + R HQF K+E+ C PE+S++ H+ + R E + LGL ++ V + T D+G A + +D+E W+P Y EIS Sbjct: 128 GTPRQFDFAVKDHVELGAPHGWLDGETAAKLSGARFTVLRGPIARLHRALAQFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFED-DLFQTEVGDSKRYLIPTSEVPLTNIVRDAIVDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFEKVELVTACSPEDSEAEHQRMTRCAEVVLEKLGLPYRKVLLCTGDMGFSAIKTYDLEVWLPSQATYREIS 353
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_XANCB (Seryl-tRNA synthetase OS=Xanthomonas campestris pv. campestris (strain B100) GN=serS PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.405e-27 Identity = 72/227 (31.72%), Postives = 114/227 (50.22%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD--QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 G P F+F VKDH +LG D + AA++SG++F L+ L L + L V + G+ P +V + + G P+ + ++ E D + LI T+E+P+ I D+I+ LPL+ A S CF + R HQF K+E+ C PE+S++ H+ + R E + LGL ++ V + T D+G A + +D+E W+P Y EIS Sbjct: 128 GTPRQFDFAVKDHVELGAPHGWLDGETAAKLSGARFTVLRGPIARLHRALAQFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFED-DLFQTEVGDSKRYLIPTSEVPLTNIVRDAIVDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFEKVELVTACSPEDSEAEHQRMTRCAEVVLEKLGLPYRKVLLCTGDMGFSAIKTYDLEVWLPSQATYREIS 353
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_XANC8 (Seryl-tRNA synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=serS PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.405e-27 Identity = 72/227 (31.72%), Postives = 114/227 (50.22%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD--QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 G P F+F VKDH +LG D + AA++SG++F L+ L L + L V + G+ P +V + + G P+ + ++ E D + LI T+E+P+ I D+I+ LPL+ A S CF + R HQF K+E+ C PE+S++ H+ + R E + LGL ++ V + T D+G A + +D+E W+P Y EIS Sbjct: 128 GTPRQFDFAVKDHVELGAPHGWLDGETAAKLSGARFTVLRGPIARLHRALAQFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFED-DLFQTEVGDSKRYLIPTSEVPLTNIVRDAIVDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFEKVELVTACSPEDSEAEHQRMTRCAEVVLEKLGLPYRKVLLCTGDMGFSAIKTYDLEVWLPSQATYREIS 353
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_SHEWM (Seryl-tRNA synthetase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=serS PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.405e-27 Identity = 74/244 (30.33%), Postives = 121/244 (49.59%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGA----NTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P+G ++ + + G + F VKDH +LG+ L DF +A +++GS+F +K + + L + L + G+T P +V + G P+ +T+ + EG LI TAE+P+ I D+I+ E+ LP+K A + CF L R HQF K+E+ +PE+S + + L E + LGL ++TV + T D+G + + FD+E W+P Y EIS Sbjct: 112 PIGKDESENVEVRRWGTIKEYGFEVKDHVELGETLGGLDFKSAVKITGSRFIIMKGQIARMHRALAQFMLDLHTTEHGYTETYVPLLVNEDSLMGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPLTNIARDTIIDEAELPVKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDSMAALDALTGHAEKVLEKLGLPYRTVILCTGDMGFGSSKTFDIEVWLPAQNTYREIS 355
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_SHEPA (Seryl-tRNA synthetase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=serS PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.405e-27 Identity = 74/244 (30.33%), Postives = 120/244 (49.18%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGA----NTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P G ++ + + G P F+F VKDH +LG+ + DF A +++GS+F +K + + L + L + G+T P +V + G P+ +T+ + EG LI TAE+P+ + D+I+ E LP+K A + CF L R HQF K+EM +PE+S E+L E + LGL ++T+ + T D+G + + +D+E W+P Y EIS Sbjct: 112 PTGADESENVEVRRWGTPKEFDFAVKDHVELGENIGGLDFKNAVKITGSRFIVMKGQIARMHRALAQFMLDLHTTEHGYTEAYVPLLVNEDSLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPLTNLVRDTIVEEDNLPIKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQLVKPEDSMQALEDLTGHAEVVLQKLGLPYRTMVLCTGDMGFGSAKTYDIEVWLPAQDTYREIS 355
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_PROA2 (Seryl-tRNA synthetase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=serS PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.405e-27 Identity = 72/235 (30.64%), Postives = 120/235 (51.06%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIK-RGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 +D I R+ + +FP+ +H LGK L I DF+ A+++G+ F + LE LIN+ L + G+T + P V + G P+ A+ QVY + + I TAE+P+ +H D IL S +PL YAA++ CF RVHQF+K+E+ + P S +E++ E + +L + ++ + + + D+ A A + +D+E W PG G++ E S Sbjct: 122 DDNHIYREKLSFDHKLDFPLDNHLDLGKRLGILDFERGAKITGAGFPVYTAKGARLERALINFMLDQHTSVNGYTEVLPPLFVNRESLRGTGQWPKFAD-QVYYMNEDNLYAIPTAEVPLTNMHRDEILDASDIPLAYAAYTPCFRREAGSYGKDTRGFLRVHQFNKVELVRYATPTTSYDALQEILSHAEGILQALKIPYRVLLLCSGDISANATKCYDIEVWAPGEGKFLEAS 355 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |