FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCA9 (Seryl-tRNA synthetase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=serS PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.404e-43 Identity = 87/238 (36.55%), Postives = 140/238 (58.82%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGE +R+ VG P P KDH +LG++L +FD + A+VSG++FY+L +L++GL+ + + GFT L P +V+ ++ GF A+ +VY +E D L+GT+E+P+ G H IL + PL+YA +S CF + RVHQF K+E FV+C+PE++++ HE+++ E + + + ++ +D+A DLG+ A RKFD EAW+P Y E++ Sbjct: 111 PAGGEQDFALRELVGEPHPIENP-KDHVELGESLGLFDMERGAKVSGARFYFLTGYGALLQLGLLQLAVQTAVANGFTLLIPPVLVKPEIMGGTGFLGAHAD-EVYHLEEDDLYLVGTSEVPIAGYHSGEILDLNNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEAFVYCKPEDAEAEHEKILGWERQMLGHIEVPYRVIDVAAGDLGSSAARKFDCEAWVPTQRAYRELT 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCVP (Seryl-tRNA synthetase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=serS PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.833e-43 Identity = 88/238 (36.97%), Postives = 138/238 (57.98%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED ++ TVG P+ P KDH +LG++L + D + A+VSGS+FY+L +L++GL + + GFT + P +VR ++ GF A+ +VY +E D L+GT+E+P+ G H IL S P +YA +S CF + RVHQF K+E FV+C+PEE+++ H+ L+ + + + + ++ +D+A DLG+ A RKFD EAW+P Y E++ Sbjct: 111 PAGGEDDFVVLDTVGEPTALTDP-KDHLELGESLGLIDMERGAKVSGSRFYFLTGFGALLQLGLFQLAVRTATENGFTLVIPPVLVRPEIMSGTGFLGAHAD-EVYRVEADDLYLVGTSEVPLAGYHSGEILDLSEGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEEAEAEHDRLLGWQRQMLGLIEVPYRVIDIAAGDLGSSAARKFDCEAWVPTQQTYRELT 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_PYRFU (Seryl-tRNA synthetase OS=Pyrococcus furiosus GN=serS PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.394e-43 Identity = 94/219 (42.92%), Postives = 132/219 (60.27%), Query Frame = 1 Query: 55 VFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 V + K H L + L DF AA+VSGS+FYYL NE V+L++ LI + L +I++GFTP+ P +VR VE+ +Y +EG D LI TAE P+ G+H + IL LPL Y AFS CF ++RVHQF K+E FV+ +PEES +HE L+R E+L+ L + ++ V++ T DLG A +K+D+EAWMPG GR+ E+ Sbjct: 154 VLEWRPKLHVDLLEILGGADFARAAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRR-FVEEGSTTFEDFEDVIYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVAFSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHERLVRNAEELFQELEIPYRVVNICTGDLGYVAAKKYDIEAWMPGQGRFREV 371
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_PYRAB (Seryl-tRNA synthetase OS=Pyrococcus abyssi GN=serS PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.084e-43 Identity = 94/219 (42.92%), Postives = 131/219 (59.82%), Query Frame = 1 Query: 55 VFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 V + K H L + L DF AA+VSGS+FYYL NE V+L++ LI + L E+IK+GFTP+ P +VR VE+ +Y +EG D LI TAE P+ G+H + IL LPL Y S CF ++RVHQF K+E FV+ +PEES +HE +IR E+L+ L + ++ V++ T DLG A +K+D+EAWMPG GR+ E+ Sbjct: 154 VLEWRPKLHVDLLEILGGADFARAAKVSGSRFYYLLNEIVILDLALIRFALDELIKKGFTPVIPPYMVRR-FVEEGSTTFEDFEDVIYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGISPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHERIIRNAEELFQKLEIPYRVVNICTGDLGYVAAKKYDIEAWMPGQGRFREV 371
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCLE (Seryl-tRNA synthetase OS=Mycobacterium leprae GN=serS PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.188e-42 Identity = 88/238 (36.97%), Postives = 139/238 (58.40%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GG+D + VG+P + P KDH +LG+AL + D A+VSGS+FY+L +L++GL+ L ++ F P+ P +VR V+ GF A +VY ++ D L+GT+E+P+ G H D IL S+ PL+YA +S CF + RVHQF K+E FV+C P +++ H+ L+ + ++ + + + ++ +D+A DLG+ A RKFD EAW+P G Y E++ Sbjct: 111 PTGGKDDYAVLDIVGDPPPLSNP-KDHLELGEALGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALRLAVENDFIPMIPPVLVRPEVMSGTGFLGAHAE-EVYRVD--DLYLVGTSEVPMAGYHSDEILDLSVGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCAPTDAEVEHQRLLGWQREMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWVPTQGSYCELT 344
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MYCLB (Seryl-tRNA synthetase OS=Mycobacterium leprae (strain Br4923) GN=serS PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.188e-42 Identity = 88/238 (36.97%), Postives = 139/238 (58.40%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GG+D + VG+P + P KDH +LG+AL + D A+VSGS+FY+L +L++GL+ L ++ F P+ P +VR V+ GF A +VY ++ D L+GT+E+P+ G H D IL S+ PL+YA +S CF + RVHQF K+E FV+C P +++ H+ L+ + ++ + + + ++ +D+A DLG+ A RKFD EAW+P G Y E++ Sbjct: 111 PTGGKDDYAVLDIVGDPPPLSNP-KDHLELGEALGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALRLAVENDFIPMIPPVLVRPEVMSGTGFLGAHAE-EVYRVD--DLYLVGTSEVPMAGYHSDEILDLSVGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCAPTDAEVEHQRLLGWQREMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWVPTQGSYCELT 344
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_PYRHO (Seryl-tRNA synthetase OS=Pyrococcus horikoshii GN=serS PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 4.992e-41 Identity = 89/219 (40.64%), Postives = 130/219 (59.36%), Query Frame = 1 Query: 55 VFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 + + K H L + L DF AA+VSGS+FYYL NE V+L++ LI + L +I++GFTP+ P +VR VE+ +Y +E D LI TAE P+ G+H + IL LPL Y S CF ++RVHQF K+E FV+ +PEES +HE++IR E+L+ L + ++ V++ T DLG A +K+D+EAWMPG G++ E+ Sbjct: 154 ILEWKPKLHVDLLEILGGADFARAAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRR-FVEEGSTSFEDFEDVIYKVEDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIPYRVVNICTGDLGYVAAKKYDIEAWMPGQGKFREV 371
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_METB6 (Seryl-tRNA synthetase OS=Methanoregula boonei (strain 6A8) GN=serS PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.477e-40 Identity = 91/239 (38.08%), Postives = 134/239 (56.07%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQV-YSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 P G +D + + VG P F+F +K+H QL DF+ AA+ SG+ FY+LK VML++ L + L + K+GFTP+ P +++ E G +V Y I+G D LI T+E P+ ++ D I E LPL+ S CF L+RVHQF+K+E FVFC+PE S HEEL+ E++++ LGL + V++ T D+G A +K+D+EAWMP Y E+ Sbjct: 115 PKGKDDTENVEIRRVGTPRTFDFELKNHGQLAADNGWADFERAAKTSGAGFYFLKGGLVMLDLALQRFALDLLGKKGFTPVIPPFMIKRDSYE--GVTDLDDFEKVMYKIDGDDTYLIATSEHPIAAMYQDEIFEEKDLPLRLCGLSPCFRREIGAHGLDTKGLFRVHQFTKIEQFVFCRPENSWQIHEELLANAEEVFTKLGLPYHVVNICTGDIGTVAAKKYDIEAWMPRENAYKEV 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BIFA0 (Seryl-tRNA synthetase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=serS PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.477e-40 Identity = 86/242 (35.54%), Postives = 139/242 (57.44%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED ++ + VG F F KDH LG+ + D +VSGS+FY+L+ + L++ ++ + + + GF TP +VR V+ GF A+ ++Y + E D L+GT+E+ + G+H + IL S PL+Y +S C+ + RVHQF K+EMFV+ +PE SD+ H++L+ +EE++ + + + ++ +D A DLG+ A RKFD EAW+P GRY E++ Sbjct: 111 PEGGEDDYVVMRKVGQIRDFAAEGFEPKDHLTLGEEVAGIDMKRGVKVSGSRFYFLRGDVARLQIAMLTMAVDQAQEHGFILAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDDYLVGTSEVALAGMHENEILDLSDGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKPENSDAEHQKLLAMEEEMLAKVEVPYRVIDTAAGDLGSSAARKFDCEAWVPTQGRYRELT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BEUC1 (Seryl-tRNA synthetase OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=serS PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.236e-40 Identity = 89/241 (36.93%), Postives = 136/241 (56.43%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED ++ + G P F F +DH +LG+ L D + A+VSG++F+YL LE+ L+N + + + GFTP+ TP +V+ ++ GF A +VY IE D L+GT+E+ + G H + I+ S PL+YA +S C+ + RVHQF K+EMF + + E++ HE L+ EE+L + L ++ +D A DLG+ A RKFD EAW+P RY E++ Sbjct: 111 PPGGEDDYVVLRHEGTPRDFAAEGFTPRDHLELGERLRAIDTERGAKVSGARFFYLTGLGARLELALLNAAIDKALTAGFTPVITPTLVKPEIMAGTGFLGAHAE-EVYRIEKDDLYLVGTSEVALAGYHANEIVDLSDGPLRYAGWSACYRREAGSHGKDTRGIIRVHQFHKVEMFSYARLEDAAVEHERLLAWEEELLRLVELPYRVIDTAAGDLGSSAARKFDCEAWLPTQERYLELT 350 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |