FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_UNCMA (Seryl-tRNA synthetase OS=Uncultured methanogenic archaeon RC-I GN=serS PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.226e-40 Identity = 90/242 (37.19%), Postives = 133/242 (54.96%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVR----SSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 PVG +D + K G P +F +K+H L DF+ AA+V+G+ FY+LK V+L+M L + + ++KRGFTP+T P ++ V + F+ +Y IEG D LI T+E P+G ++ I E LPL+ A S CF L+RVHQF K+E FVFC+PE+S HEE++ E ++ LGL + V++ T D+G A +K+D+E WMP Y E+ Sbjct: 115 PVGKDDTENVEVKRWGEPVQKDFEIKNHGLLAVEHGWADFERAAKVAGAGFYFLKGNMVLLDMALQRFAMDLLVKRGFTPVTPPYMMNRKSYEGVTDLADFEK-----VMYKIEGDDMYLIATSEHPIGAMYQGEIFEEKDLPLRLAGISPCFRREIGAHGLDTKGLFRVHQFHKIEQFVFCKPEDSWKIHEEILANAEAVFQQLGLPYHVVNICTGDIGTVAAKKYDIEVWMPRENTYKEV 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_METLZ (Seryl-tRNA synthetase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=serS PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.226e-40 Identity = 86/238 (36.13%), Postives = 132/238 (55.46%), Query Frame = 1 Query: 1 PVGGEDC-SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 P G +D +++ K VG P +F +K+H +L A DF+ A + SG+ FY+LK +L+M L + L +I +G+TP+ P ++ E+ +Y IE D LI TAE P+ ++ D I E LPLK S CF L+RVHQF+K+E F++C PE+S HEEL+ E++++ LGL ++ V++ T D+G A +K+D+EAWMP Y E+ Sbjct: 115 PYGKDDTENVVVKKVGTPRSLDFELKNHGELAAANGWADFERATKTSGAGFYFLKGNLALLDMALQRFALDTIIAKGYTPIIPPYMMNRKSYEEVT-DLGDFEKVMYKIEDDDAYLIATAEHPMAAMYQDEIFEEKDLPLKMVGISPCFRREIGAHGLDSRGLFRVHQFTKIEQFIYCMPEKSWEMHEELLANAEEIFTKLGLPYRVVNICTGDIGTVAAKKYDMEAWMPRDNEYREV 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_THEGJ (Seryl-tRNA synthetase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=serS PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.606e-39 Identity = 88/217 (40.55%), Postives = 128/217 (58.99%), Query Frame = 1 Query: 79 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT------QVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 H + + L D + AA+VSGS+FYYL NE V+L++ LI + L +I++GFTP+ P +VR V E GA T +Y +EG D LI TAE P+ G+H + IL LPL Y S CF ++RVHQF K+E FV+ +PEES +HE++I E+L+ L + ++ V++ T DLG A +K+D+EAWM G G++ E+ Sbjct: 162 HVDMLELLRGADLERAAKVSGSRFYYLLNELVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEE-------GATTFEDFEDVIYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIANAEELFQELEIPYRVVNICTGDLGYVAAKKYDIEAWMAGQGKFREV 371
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_TROWT (Seryl-tRNA synthetase OS=Tropheryma whipplei (strain Twist) GN=serS PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.097e-39 Identity = 86/238 (36.13%), Postives = 132/238 (55.46%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P G ED + KTVG+ F+F DH QLG+ LD D +VSG++FY+LK LE+ ++N L +K G T L TP +V+ ++ GF R +VY + L GT+E+ + G H D IL S P++YA +S C+ + RVHQFSKLEMF + P++S E ++ ++E + + L + ++ D+A E+LG A RK+D+EAW+P + E++ Sbjct: 111 PYGVEDKCAVMKTVGDIPEFDFEPADHLQLGEQLDAIDVSRGVKVSGTRFYFLKGWGARLELAVMNLALDLALKSGLTLLITPTLVKPEIMLGTGFLGRHEG-EVYRLPSG-YYLTGTSEVAIAGYHSDEILDISSGPIRYAGWSSCYRREAGSHGRDTRGIMRVHQFSKLEMFSYVHPQQSTRELEHIVSMQEKMLNLLEIPYRVSDIAAEELGTSASRKYDLEAWIPSQNTWREVT 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_TROW8 (Seryl-tRNA synthetase OS=Tropheryma whipplei (strain TW08/27) GN=serS PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.097e-39 Identity = 86/238 (36.13%), Postives = 132/238 (55.46%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P G ED + KTVG+ F+F DH QLG+ LD D +VSG++FY+LK LE+ ++N L +K G T L TP +V+ ++ GF R +VY + L GT+E+ + G H D IL S P++YA +S C+ + RVHQFSKLEMF + P++S E ++ ++E + + L + ++ D+A E+LG A RK+D+EAW+P + E++ Sbjct: 111 PYGVEDKCAVMKTVGDIPEFDFEPADHLQLGEQLDAIDVSRGVKVSGTRFYFLKGWGARLELAVMNLALDLALKSGLTLLITPTLVKPEIMLGTGFLGRHEG-EVYRLPSG-YYLTGTSEVAIAGYHSDEILDISSGPIRYAGWSSCYRREAGSHGRDTRGIMRVHQFSKLEMFSYVHPQQSTRELEHIVSMQEKMLNLLEIPYRVSDIAAEELGTSASRKYDLEAWIPSQNTWREVT 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_MICLC (Seryl-tRNA synthetase OS=Micrococcus luteus (strain ATCC 4698 / IFO 3333 / NCTC 2665) GN=serS PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.577e-39 Identity = 83/241 (34.44%), Postives = 134/241 (55.60%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED ++ K VG P F F +DH +LG+ L D + A+VSG++F +L LE+ L+ L ++ GF P+ P +VR ++ GF + ++Y +E D L+GT+E+ + G H I+ S P++YA +S C+ + RVHQF+KLEMF++ E++++ H L+ EE + ++ + ++ +D+A DLG A RKFD EAW+P G Y E++ Sbjct: 111 PAGGEDDFVVLKEVGTPRDFAAEGFEPRDHLELGELLGAIDMERGAKVSGARFSFLTGVGARLELALMQLGLDLALENGFVPVIPPTLVRPETMQGTGFDVEH-DDEIYRLERDDLYLVGTSEVALAGFHAGEIMDVSA-PVRYAGWSTCYRREAGSAGKDTRGIIRVHQFNKLEMFIYAAQEDAEAEHARLLAWEERMLGAIEVPYRVIDIAAGDLGLSAARKFDCEAWVPTQGTYRELT 349
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_METST (Seryl-tRNA synthetase OS=Methanosphaera stadtmanae (strain DSM 3091) GN=serS PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.577e-39 Identity = 84/233 (36.05%), Postives = 130/233 (55.79%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 ED + + +T G+ F+F +H L +D D D A++++GS+FYYLK + + L + LI + L+E+ +G+TPL TP ++S V E+ T +Y +E D LI TAE + +H + I+ LPL+Y A S CF ++RVHQF K+E F++ PE S HE+L+ + E +Y LGL ++ V + + L A K+D+EAW PG G Y E+ Sbjct: 117 EDDNEVIRTNGDFPSFDFEPLNHVDLINLIDGADTDTASQIAGSRFYYLKQDILFLNLALIQFALNELKDKGYTPLQTPFFIKSEVAEETSELGEFEET-LYKVENEDLYLIATAEQTLAALHRNEIIDSEDLPLRYCALSTCFRKEAGSHGKDTLGIFRVHQFEKVEQFIYATPENSTLEHEKLLEVTEGIYQKLGLPYQIVAIVSSALNDNAAIKYDLEAWFPGSGTYREL 348
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BIFAA (Seryl-tRNA synthetase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=serS PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.577e-39 Identity = 84/242 (34.71%), Postives = 137/242 (56.61%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED ++ K VG F F KDH LG+ + D + +V GS+FY+L+ + +++ ++ + + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+H + IL+ PL+Y +S C+ + RVHQF K+EMFV+ + E+S HE L+ +E+++ + + ++ +D A DLG+ A RKFD EAW+P GRY E++ Sbjct: 111 PEGGEDDYVVVKKVGQIRDFAAEGFEPKDHLTLGRGVAGIDMERGVKVGGSRFYFLRGQVARMQIAMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGMHENEILNLENGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDSYKEHEHLLAMEQEMLGKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_THEON (Seryl-tRNA synthetase OS=Thermococcus onnurineus (strain NA1) GN=serS PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.672e-39 Identity = 87/212 (41.04%), Postives = 128/212 (60.38%), Query Frame = 1 Query: 79 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQV-YSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 H + + L D + AA+VSGS+FYYL NE V+L++ LI + L ++I++GF P+ P +VR V E G G V Y +EG D LI TAE P+ G+H + IL LPL Y S CF ++RVHQF K+E FV+ +PEES +HE+LI+ E+++ L + ++ V++ T DLG A +K+D+EAWM G G++ E+ Sbjct: 162 HVDMLEILRGADIERAAKVSGSRFYYLLNELVILDLALIRFALDKLIEKGFIPVIPPYMVRRYVEE--GVTSFGDFEDVIYKVEGEDLYLIPTAEHPLAGMHANEILEGKDLPLLYVGISPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKLIQNAEEIFQELEIPYRVVNICTGDLGYVAAKKYDIEAWMAGQGKFREV 371
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_PYRKO (Seryl-tRNA synthetase OS=Pyrococcus kodakaraensis GN=serS PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.672e-39 Identity = 86/217 (39.63%), Postives = 129/217 (59.45%), Query Frame = 1 Query: 79 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT------QVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 H + + L D + AA+VSG++FYYL NE V+L++ LI + L ++I++GFTP+ P +VR V E GA T +Y +EG D LI TAE P+ G+H + IL LPL Y S CF ++RVHQF K+E FV+ +PEES +HE +I E+++ +L + ++ V++ T DLG A +K+D+EAWM G G++ E+ Sbjct: 162 HVDMLELLRGADLERAAKVSGARFYYLLNELVILDLALIRFALDKLIEKGFTPVIPPYMVRRFVEE-------GATTFDDFEDVIYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHERIIANAEEIFQALEIPYRVVNICTGDLGYVAAKKYDIEAWMAGQGKFREV 371 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |