FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_METHJ (Seryl-tRNA synthetase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=serS PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.672e-39 Identity = 84/238 (35.29%), Postives = 131/238 (55.04%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 PVG +D + K G P F F +K+H QL D DF+ A + SG+ FY+LK V+L++ L ++L ++++G+TP+ P ++ E+ +Y IE D LI T+E P+ ++ D I E LPL+ A S CF L+RVHQF K+E FV+C P++S + HEEL E+++ L + ++ V++ T D+G A +K+D+EAWMP Y E+ Sbjct: 115 PVGADDTQNVEVKRYGTPRTFTFELKNHGQLAADNDWADFERATKTSGAGFYFLKGNLVLLDLALQRFSLDILMEKGYTPIIPPYMINRKSYEEVT-DLDDFEKVMYKIEDDDAYLIATSEHPMAAMYQDEIFEEKDLPLRLAGLSPCFRREIGSHGLDTKGLFRVHQFHKVEQFVYCHPDDSWTIHEELRENAEEIFQKLEIPYRVVNICTGDIGTVAAKKYDIEAWMPRENEYREV 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_SYMTH (Seryl-tRNA synthetase OS=Symbiobacterium thermophilum GN=serS PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.041e-38 Identity = 86/239 (35.98%), Postives = 131/239 (54.81%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG ++ + K G P F FPVK H+ LG A+D DF+ AA+V+GS+F ++K L L+++ + + +RG+ + P I+ ++ G P+ V+S+ G D L TAE+P+ +H D IL E++LPL+Y +S CF L R H F K+EM F +PEES+ E++ E + L L ++ + M T D+G Y+K+D+E WMP RY EIS Sbjct: 112 PVGPDETGNVEVKRWGEPRQFAFPVKPHWDLGVAMDGLDFERAAKVTGSRFSFIKGGLARLHRALVSFFIDYLTERGYREVLPPVIINTASYYGSGQFPK-FKEDVFSLAGTDYHLASTAEVPLVNMHRDEILDEAVLPLRYVGYSGCFRSEAGAAGRDTRGLIRQHYFEKVEMVQFTRPEESEQALMEIVANAEGMLEQLNLPYRRMLMCTGDMGFGQYKKYDIEVWMPSYERYVEIS 349
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BIFLO (Seryl-tRNA synthetase OS=Bifidobacterium longum GN=serS PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.319e-38 Identity = 84/242 (34.71%), Postives = 135/242 (55.79%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED ++ K VG F F KDH LG + D +V GS+FY+L+ + +++ ++ + + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+H + IL PL+Y +S C+ + RVHQF K+EMFV+ + E+S HE L+ +E+++ + + + ++ +D A DLG+ A RKFD EAW+P GRY E++ Sbjct: 111 PEGGEDDYVVVKKVGQIRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGQVARMQIAMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDSYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BIFLI (Seryl-tRNA synthetase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=serS PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.319e-38 Identity = 84/242 (34.71%), Postives = 135/242 (55.79%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED ++ K VG F F KDH LG + D +V GS+FY+L+ + +++ ++ + + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+H + IL PL+Y +S C+ + RVHQF K+EMFV+ + E+S HE L+ +E+++ + + + ++ +D A DLG+ A RKFD EAW+P GRY E++ Sbjct: 111 PEGGEDDYVVVKKVGQIRDFAAEGFEPKDHLTLGAGVAGIDMRRGVKVGGSRFYFLRGQVARMQIAMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDSYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BIFLD (Seryl-tRNA synthetase OS=Bifidobacterium longum (strain DJO10A) GN=serS PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.319e-38 Identity = 84/242 (34.71%), Postives = 135/242 (55.79%), Query Frame = 1 Query: 1 PVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P GGED ++ K VG F F KDH LG + D +V GS+FY+L+ + +++ ++ + + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+H + IL PL+Y +S C+ + RVHQF K+EMFV+ + E+S HE L+ +E+++ + + + ++ +D A DLG+ A RKFD EAW+P GRY E++ Sbjct: 111 PEGGEDDYVVVKKVGQIRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGQVARMQIAMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDSYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_ROSS1 (Seryl-tRNA synthetase OS=Roseiflexus sp. (strain RS-1) GN=serS PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.503e-37 Identity = 85/234 (36.32%), Postives = 126/234 (53.85%), Query Frame = 1 Query: 13 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 E +++ G P F+F K H++LG+ALDI DF+ ++SGS+FY LK L+ LI W L K+G+ + TP +V+ + P+ + +E D L+ TAE+PV +H D IL LPL+Y A++ CF + R HQF K+EM++F +PE S E+L E+ LGL F+T ++ T DLG A R +D+E W PG G + E+S Sbjct: 117 ETYNVVIAQEGEPRTFDFTPKPHWELGEALDIIDFERGVKLSGSRFYVLKGPGARLQRALIQWMLDLHGKQGYDEVYTPFVVKEQCMWGARQLPKFRDNLYRDVED-DLWLVPTAEVPVTNLHRDEILDADQLPLRYCAYTPCFRREKMSAGRDVRGIKRGHQFDKVEMYMFVRPETSYDELEKLRADAEETCRLLGLPFRTKELCTGDLGFAATRTYDIEVWAPGQGEWLEVS 349
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_THESM (Seryl-tRNA synthetase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=serS PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.963e-37 Identity = 81/201 (40.30%), Postives = 125/201 (62.19%), Query Frame = 1 Query: 112 DFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQV-YSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 D + AA+VSG++F+YL NE V+L++ LI + L ++I++GF P+ P +VR V E G G V Y IEG D LI T+E P+ G+H + IL LP+ YA S CF ++RVHQF K+E FV+ +PEES +HE+L++ E+++ +L + ++ V++ T DLG A +K+D+EAWM G++ E+ Sbjct: 173 DLERAAKVSGARFFYLLNELVILDLSLIRFALDKLIEKGFIPVIPPYMVRKYVEE--GVTSFGDFEDVIYKIEGEDLYLIPTSEHPLAGMHSNEILDGHNLPILYAGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYARPEESWEWHEKLLQNAEEIFQALEIPYRIVNICTGDLGYAAAKKYDIEAWMSAQGKFREV 371
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_PICTO (Seryl-tRNA synthetase OS=Picrophilus torridus GN=serS PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.564e-37 Identity = 79/223 (35.43%), Postives = 129/223 (57.85%), Query Frame = 1 Query: 43 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEI 711 G+ ++ K H L L++ D + A +++G++FY+LKN LE+ LIN+ + + +RG+T L P ++ + +T +Y IEG D LI TAE P+ + D IL E LP++ + S CF ++RVHQF+K+E FVFC+PE+S + +EL+R ED+Y SL + ++ V++ + +LG A +K+D+EAW P G++ EI Sbjct: 147 GDYEEIDYRPKSHVDLISELNLADIERAGKIAGARFYFLKNRLFKLELALINYAVDFLSQRGYTVLEPPFMINYKSMSGATDIETFKDT-LYKIEGDDLYLIATAEHPIASMLQDEILMEDELPIRVSGVSPCFRREAGAHGKDTKGIFRVHQFNKIEQFVFCKPEDSWDFFDELVRNSEDIYKSLKIPYRVVNVCSGELGNLAAKKYDIEAWFPAQGKFREI 368
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_CAMJJ (Seryl-tRNA synthetase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=serS PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.564e-37 Identity = 87/239 (36.40%), Postives = 130/239 (54.39%), Query Frame = 1 Query: 1 PVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG ED ++ K V NPS F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+ + RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++ IL+ LP+K +S CF + R HQF K+E+ +PE+SDS E++ DL SSLGL + + + T DLG A + D+E W+PG +Y EIS Sbjct: 109 PVGEDEDENVELKKVLNPSSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNYMIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREIS 346
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_THEPX (Seryl-tRNA synthetase OS=Thermoanaerobacter sp. (strain X514) GN=serS PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.348e-37 Identity = 87/240 (36.25%), Postives = 133/240 (55.42%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 P+G D + + G P F+F K H+++G+ LDI DF+AAA V+GS+F + K LE LIN+ L + K G+T + P +V + G P+ + + G D LI TAE+PV ++ D+I+ LP+ + A+S CF L R HQF+K+E+ F +P++S E++ R E++ +LGL ++ V + T DLG A +K+D+E WMP GRY EIS Sbjct: 112 PIGDSDEDNVEIRRWGEPRKFDFEPKPHWEIGQELDILDFEAAARVTGSRFTFYKGLGARLERALINFMLDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPK-FEEDAFKVYGTDYFLIPTAEVPVTNMYRDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELEKMTRDAEEVLQALGLPYRVVVICTGDLGFTASKKYDIEVWMPSYGRYVEIS 350 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |