FC920632

Overview
NameFC920632
Unique NameFC920632
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: ABHD_DICDI (Abhydrolase domain-containing protein OS=Dictyostelium discoideum GN=abhd PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.345e-19
Identity = 67/214 (31.31%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   25 PALKTLSRPYGPFPVIGWNCHVETIFAAFFRSLPDIKLKREC-IRTKDDGSVALDWIS-GDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRA-RSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHV-GSKYPKA-HLYAVGWSLGANILVRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRMLFSLKTWVVNLIFRWQLMPSL 651
            P +K     Y P+ +  +N H    + ++     ++K +RE  +   D G+++LD+   G+ +    D+P +++  GLTGGS + YV++   RA + KG+R VVFN RGC  +P+T  + YSA  L D++ V  ++  +  P     + VG+SLG+ ILV Y+       P    VS+ NP N+V   ++        T++ NLI+   L  +L
Sbjct:   53 PTIKNGVTFYPPYYL--YNSHFMNYYGSYKIPKLNLKTRREILVNPIDGGTISLDFFELGEFK---EDTPTIVINHGLTGGSHERYVQYFAQRAYKEKGFRSVVFNYRGCAGNPITADRAYSAVQLDDIKFVTEYLTKTALPLVKKWFLVGFSLGSAILVNYMADAGKDSPYLAHVSISNPMNMVECTKNLS-----STYINNLIYNKGLANNL 256          

HSP 2 Score: 21.557 bits (44), Expect = 5.345e-19
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 3
Query:  642 AKSVRQFDDGLTRXSFGF 695
            A+++  FDD +T   FGF
Sbjct:  279 AQTIADFDDLITSKMFGF 296          
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: YM60_YEAST (Putative esterase YMR210W OS=Saccharomyces cerevisiae GN=YMR210W PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.881e-19
Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 1
Query:  100 FAAFFRSLPDIKLKRECIRTKD---DGSVA--LDWISGDHQLLPPDS--PVLILMPGLTGGSEDSYVRHMLLRARSK-GWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCPLSGAVSLCNPFNL 561
            FA   RS    K+++E + T     +G++     + S D   L  D   P+LI++ GLTGGS +SYVR ++    +K  +   VFN+RGC  S +TTP  Y+  +  D++  V  +  ++P    Y +G+SLGA+I+  YLG ES    +  A+S+ NPF+L
Sbjct:  102 FAVNGRSTKRRKVEKEYVPTSQPVFNGNLKRRYSYYSPDDPKLNSDDAKPMLIILHGLTGGSRESYVRAIVHEITTKYDFEACVFNARGCCYSAITTPLLYNGGWTNDIRYCVNDLRKRFPNRKFYMMGFSLGASIMTNYLGEESDRTKIECAISVSNPFDL 263          
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: MCFS1_YEAST (Medium-chain fatty acid ethyl ester synthase/esterase 1 OS=Saccharomyces cerevisiae GN=EEB1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.160e-18
Identity = 46/116 (39.66%), Postives = 74/116 (63.79%), Query Frame = 1
Query:  226 PVLILMPGLTGGSEDSYVRHM---LLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCPLSGAVSLCNPFNLV 564
            P+++++ GL GGS +  +R +   L +     ++VVV N+RGC  S VTT + ++A   GD++E + H  + +P+  +YAVG S GA +L  YLG E  +CPL+ AV+L NP++ V
Sbjct:  168 PLVVVLHGLAGGSHEPLIRALSEDLSKVGDGKFQVVVLNARGCSRSKVTTRRIFTALHTGDVREFLNHQKALFPQRKIYAVGTSFGAAMLTNYLGEEGDNCPLNAAVALSNPWDFV 283          
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: ABHD2_DROME (Abhydrolase domain-containing protein 2 OS=Drosophila melanogaster GN=Hydr2 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 49/180 (27.22%), Postives = 89/180 (49.44%), Query Frame = 1
Query:   40 LSRPYGPFPVIGWNCHVETIFAAFFRSL--PDIKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS-PVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCP--LSGAVSLCNPFNLV 564
            L  PY P  + G++ HV+T+  +    +  P    +R  +  KD  ++  D     ++    D   + + PG+   SE  Y+R  +  A+  G+R  V N  G   S  VT+ + ++     D   +V H+  KY ++ + AVG+SLG N++ +Y+G +  + P  + G +S+C  +N V
Sbjct:   49 LREPYIPPRLWGFSGHVQTVLHSIVGRVRCPWPLGERVYMSLKDGSTLTYDLYQPLNE--QEDDITVAICPGIANSSESVYIRTFVHLAQCNGYRCAVLNHIGALRSVQVTSTRIFTYGHTEDFAAMVEHLHQKYRQSRIVAVGFSLGGNLVTKYMGEDQKTKPDKVIGGISICQGYNAV 226          
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: ABH15_MOUSE (Abhydrolase domain-containing protein 15 OS=Mus musculus GN=Abhd15 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.165e-12
Identity = 48/159 (30.19%), Postives = 81/159 (50.94%), Query Frame = 1
Query:   85 HVETIFAAFFRSLPDIKLKRECIRTKDDGSVALDWISG----DHQLLPPDS--PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCPLSGAVSL 543
            H++T         P  +L RE ++  DDG VALDW+ G      ++  P S  PVL+++P   G    + V  + L A  +G+  V+F+ RG    P+ +P+        D++E V ++  ++P A L+AV    G+ +L+ YLG    S  ++GA  +
Sbjct:   96 HLQTFCHFILPVGPGPELAREYLQLADDGLVALDWVIGPCARGRRVTNPGSLPPVLLVIPNAWGRLTRN-VLGLCLLALERGYYPVIFHRRGHHGCPLVSPRLQPFGDPSDLKEAVTYIRFRHPAAPLFAVSEGSGSALLLSYLGECGSSSYVTGAACI 253          
BLAST of FC920632 vs. ExPASy Swiss-Prot
Match: YHET_ECOLI (Putative esterase yheT OS=Escherichia coli (strain K12) GN=yheT PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 49/184 (26.63%), Postives = 77/184 (41.85%), Query Frame = 1
Query:   79 NCHVETIFAAFFRSLPDIKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILVRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRMLFS--LKTWVVNLI 624
            NCH++T+    FR         + +   D   V L W     Q      P L++  GL G     Y   ++  A+ +GW  VV + RGC   P    + Y +    D    +  +  ++  A   AVG+SLG N+L   L  E +  P+  AV +  PF L          FS   + +++NL+
Sbjct:   26 NCHLQTMLPRLFRRQVKFTPYWQRLELPDGDFVDLAWSENPAQA--QHKPRLVVFHGLEGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLACLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLL 207          
The following BLAST results are available for this feature:
BLAST of FC920632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
ABHD_DICDI5.345e-1931.31Abhydrolase domain-containing protein OS=Dictyoste... [more]
YM60_YEAST8.881e-1935.80Putative esterase YMR210W OS=Saccharomyces cerevis... [more]
MCFS1_YEAST1.160e-1839.66Medium-chain fatty acid ethyl ester synthase/ester... [more]
ABHD2_DROME1.622e-1227.22Abhydrolase domain-containing protein 2 OS=Drosoph... [more]
ABH15_MOUSE6.165e-1230.19Abhydrolase domain-containing protein 15 OS=Mus mu... [more]
YHET_ECOLI1.373e-1126.63Putative esterase yheT OS=Escherichia coli (strain... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32011A07EF RVDevelop1 Citrus clementina cDNA clone C32011A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920632 ID=FC920632; Name=FC920632; organism=Citrus clementina; type=EST; length=723bp
GGTGGTGCACTTCACACCTTCCTTCCAGCTCTCAAGACACTGAGCCGTCC
GTATGGTCCGTTTCCGGTAATTGGTTGGAACTGCCACGTGGAGACTATAT
TCGCCGCGTTCTTTCGGTCTCTCCCAGACATCAAGCTCAAGCGGGAATGT
ATCCGAACCAAAGACGACGGCTCCGTCGCTCTCGACTGGATCTCCGGCGA
CCACCAACTCTTGCCTCCCGATTCTCCCGTCCTCATTTTGATGCCAGGTT
TAACAGGAGGGAGTGAGGATTCATACGTCAGGCATATGCTACTTAGAGCG
AGAAGTAAGGGGTGGCGAGTTGTGGTGTTCAATAGTCGAGGTTGCGGAGA
TAGCCCTGTTACAACTCCTCAGTTCTATTCGGCTTCATTTTTAGGAGATA
TGCAAGAAGTAGTAGCACATGTTGGATCCAAGTACCCAAAAGCCCATTTG
TATGCAGTTGGATGGTCTCTGGGGGCAAATATTCTTGTTCGTTATTTGGG
TCATGAATCTCACAGTTGCCCTCTTTCTGGGGCTGTTTCACTGTGTAATC
CATTCAATTTGGTCATTGCAGATCAAGATTTCCGCATGCTCTTCTCTTTG
AAGACATGGGTGGTGAATTTAATATTCCGCTGGCAGCTAATGCCAAGTCT
GTCAGGCAGTTTGATGATGGATTGACCCGTGNTTCATTTGGTTTCAGTCA
GTGGATGACTACTACTCTAATTC
back to top