FC920634

Overview
NameFC920634
Unique NameFC920634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 60/157 (38.22%), Postives = 82/157 (52.23%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFR 632
            PPGP+  P +GNL  LG +PHQS+  L+  HGPLM+L+LG              +  K HDS FS RP    A  + Y    + F PYG  WR +RKI  + L S K +  +  VR EE+ +L + +A     PVNL++       N + R+ LG R
Sbjct:   34 PPGPRKLPFIGNLHQLGTLPHQSLQYLSNKHGPLMFLQLGSIPTLVVSSAEMAREIFKNHDSVFSGRPSLYAANRLGYG-STVSFAPYGEYWREMRKIMILELLSPKRVQSFEAVRFEEVKLLLQTIA-LSHGPVNLSELTLSLTNNIVCRIALGKR 188          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22
Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLG 626
            PP P  +P++GNL  +G +PH+S+  LA  +GP+M L  GF             + L+ HD +  +RP   G + ++ N++D+ F PYG  W+  RK +   LF  K +  +RH+R+EE   L + L+ +     PV+L++ L     +   RV LG
Sbjct:   31 PPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVNRSPVDLSKSLFWLTASIFFRVALG 187          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22
Identity = 53/157 (33.76%), Postives = 86/157 (54.78%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLG 626
            PP P  +P++GNL  +G +PH+S+  LA  +GP+M L  GF             + L+ HD +  +RP   G + ++ +++DI F PYG  W+  RK +   LF  K +  +RH+R+EE   L + L+ +  +  PV+L++ L     + L RV LG
Sbjct:   31 PPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVDRSPVDLSKSLFWLTASILFRVALG 187          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22
Identity = 52/157 (33.12%), Postives = 87/157 (55.41%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLG 626
            PP P   PI+GNL HL  +PH+    L+  +GPL++LRLG                LK +D    +RP   G+  ++Y ++DI F PYG  WR +RK++ + LFS K +  +R++R+EE+  + + ++ +  +  PV+L++       + + RV LG
Sbjct:   32 PPSPSSLPIIGNLHHLAGLPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKVSESALKQSPVDLSKTFFSLTASIICRVALG 188          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22
Identity = 56/169 (33.14%), Postives = 88/169 (52.07%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSD 662
            PP P   P++GNL  LGP PH+ +  L+  +GPLM L  G                +K HD  F+NRP +          +DI+F PYG  W+ ++ +  VHL + K +  + ++R+EE+ V+T  L  AS+ +  VNL++ L     + + R+ LG R + +  GG D
Sbjct:   34 PPSPWRLPVIGNLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKLEEASSSSSSVNLSKLLMTLTNDIICRITLG-RKYNEEEGGID 201          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.615e-22
Identity = 56/162 (34.57%), Postives = 86/162 (53.09%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVFG 641
            PPGP   PI+GNL  LG  PH+S+  L+ T+GPLM L+ G              + LK  D    +RP  +    + YN +D+ F PY   WR +RK++ V L++ K +  ++H R+EE+A L   +  A +  +PVNL ++L     + + RV  G  + G
Sbjct:   30 PPGPPRLPIIGNLHQLGSKPHRSMFKLSETYGPLMSLKFGSVSTVVASTPETVKEVLKTFDVECCSRPNMTYPARVTYNLKDLCFSPYSKYWREVRKMTVVELYTAKRVQSFQHTRKEEVAALVDFIKQAASLEKPVNLNKKLMKLSGSVICRVAFGINLQG 191          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 4.615e-22
Identity = 57/167 (34.13%), Postives = 86/167 (51.50%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSD 662
            PP P   P++ NL  LG  PH+S+  L+  +GPLM L  G                LK HD  F++RP +     I YN +D+   PYG  WR ++ +  +HLFS K +  +R VRQEE++++   +  + +  +NL++ L     N + RV LG R +G  T   D
Sbjct:   34 PPSPPRLPLIRNLHQLGRHPHRSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASRPRSKIFDKIFYNGRDVALAPYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMIEKIRISSSLRINLSEILVNLTNNVICRVALG-RKYGGKTDFKD 199          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 57/160 (35.62%), Postives = 85/160 (53.12%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG--TEPVNLAQRLNLCVVNALGRVMLGFRV 635
            PPGP   P +GNL  L  +P ++   L   +GP++ LR GF             + LKIHD    +RP  +G + I+YN++DI F PYG  W+ +RK+S V LF+ K    +R +R+EE  +L + L        PVNL + L   V + + R+  GF +
Sbjct:   29 PPGPPKLPFIGNLHQLQELPPRN---LNHKYGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSRPETAGTRKISYNFKDIGFAPYGEEWKAMRKLSVVELFTAKKHQYFRSIREEENDLLVKKLTELALTRSPVNLKKTLFTLVGSIVCRIGFGFNL 185          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 57/158 (36.08%), Postives = 84/158 (53.16%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFR 632
            PPGP   PI+G++PHL G  PH+ +  LA+ +GPLM+L+LG              + +K HD  F++RP +     + Y   DI F PYG  WR +RKI +V L S K +     +R+EE+  L + +AS     VNL+Q ++  +     R   G R
Sbjct:   20 PPGPWKLPIIGSIPHLVGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASEEGSVVNLSQAIDSLIFTITSRSAFGKR 177          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 54/160 (33.75%), Postives = 83/160 (51.88%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLGFRV 635
            PPGPK  PI+GNL +L  +PH     L++  GP+M L  GF             + LK  D    +RP     + I+YN++DI F PYG  W+ LRK+  + L + K    +R++R+EE  +L + L  +  +  PVNL + L   V + + R+  G  +
Sbjct:   33 PPGPKTLPIIGNLHNLTGLPHTCFRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSRPETVATRMISYNFKDIGFAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKLTESALKKSPVNLKKTLFTLVASIVCRLAFGVNI 192          
The following BLAST results are available for this feature:
BLAST of FC920634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
C71A9_SOYBN2.705e-2238.22Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C71BK_ARATH3.533e-2233.12Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71BJ_ARATH3.533e-2233.76Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH3.533e-2233.12Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71AR_ARATH3.533e-2233.14Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C71BC_ARATH4.615e-2234.57Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71AO_ARATH4.615e-2234.13Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71BT_ARATH6.027e-2235.63Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71DB_LOTJA7.872e-2236.08Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71B7_ARATH7.872e-2233.75Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC32011A09EF RVDevelop1 Citrus clementina cDNA clone C32011A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920634 ID=FC920634; Name=FC920634; organism=Citrus clementina; type=EST; length=689bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGA
ATGCCCTAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACGGTACC
GGAGGGAGCGACCCGAGGGCTGACGAGTTCAAATCAATG
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