FC920634

Overview
NameFC920634
Unique NameFC920634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 53/163 (32.52%), Postives = 86/163 (52.76%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGT 650
            P  P   P++GNL  LG  PH+S+  L+  +GPLM LR G                LK +D  F++RP +   + I Y  +D+   PYG  WR ++ +  +HL + K +  +R+VRQEE++++   +  + +  VNL++ L     + + RV LG R + D T
Sbjct:   33 PASPPRLPLIGNLHQLGRHPHRSLCSLSNRYGPLMLLRFGLVPVLVVSSADVARDILKTYDRVFASRPRSKIFEKIFYEARDVALAPYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEISLMMEKIQKSSSLQVNLSELLGSLTNDVISRVALG-RKYSDET 194          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.028e-21
Identity = 62/181 (34.25%), Postives = 91/181 (50.28%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRP-PNSGAKHIAYNYQDIV--FRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSM 689
            PP PK  PI+G+L  + P+PHQ    L+  HGP+M L LG              +FLK H+ NFSNRP  N   K +AY+ QD +  F P+GP W+ ++K+    L SG+ +D +  VRQ+E       +   G   E V+    L     N + R+ L  +     T  +D +A+E K +
Sbjct:   30 PPSPKALPIIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVDFGDELMTLSNNIVSRMTLSQK-----TSENDNQAEEMKKL 205          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.028e-21
Identity = 50/155 (32.26%), Postives = 85/155 (54.84%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 626
            PPGP+ WPI+GN+  +  + H+ +A LA+ +G L +LR+GF             Q L++ DS FSNRP      ++ Y+  D+ F  YGP WR +RK+  + +FS K  + +  VR +E+  + R+++    +P+N+ +++     N   R   G
Sbjct:   41 PPGPRGWPIIGNMLMMDQLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVR-DEVDKMVRSVSCNVGKPINVGEQIFALTRNITYRAAFG 194          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.343e-21
Identity = 50/161 (31.06%), Postives = 86/161 (53.42%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGD 644
            P  P   P++GNL  LG  PH+S+  L+  +GPLM L LG                LK HD  F++RP +   + + Y+ +D+ F PYG  WR ++ +  + L S K +  +R+VRQEE++++   +  + +  VN+++ L     + + R+ LG +  G+
Sbjct:   33 PRSPPRLPLIGNLHQLGHHPHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASRPRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQKSSSLQVNVSELLGSLTNDVISRIALGRKYSGE 193          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.754e-21
Identity = 58/170 (34.12%), Postives = 84/170 (49.41%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMA-VLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPR 668
            PP P+  PI+GNL  LG  PH+S+  L++ +GP+M L LG                LK HD  ++ RP  S A  + Y  +D+ F P+G  W  +R I  +HL S K +  YR VR+EE A ++ +         +NL + L     N   RV LG R + +   G D +
Sbjct:   37 PPSPRKLPIIGNLHQLGSHPHRSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATRPKYSIADSLLYGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCDASVINLGEHLCFLTNNITSRVALG-RTYDERESGIDAK 205          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21
Identity = 56/163 (34.36%), Postives = 88/163 (53.99%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL---ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFG 641
            PP P  +PI+GNL  LG +PHQS+  L++ +G +M L+ G              Q LKIHD +  +RP  +G + ++YNY DI F P+   W+ LR+I    LFS K +  ++ ++++E+  L  ++   AS GT PVNL+++     V    +   G    G
Sbjct:   32 PPSPPGFPIIGNLHQLGELPHQSLWRLSKKYGHVMLLKFGSIPTVVVSSSETAKQVLKIHDLHCCSRPSLAGPRALSYNYLDIAFSPFDDYWKELRRICVQELFSVKRVQSFQPIKEDEVKKLIDSVSESASQGT-PVNLSEKFTSLTVRVTCKATFGVNFQG 193          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21
Identity = 54/159 (33.96%), Postives = 83/159 (52.20%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG----TEPVNLAQRLNLCVVNALGRVMLG 626
            PPGPK  PI+GNL   G   H+S+  +++ +GP+M L  G              + LK HD    +RP   G+    YN++DI F PYG  WR +RKI+   LFS K L  +R++R++E  +L R ++ +     T  VNL + +     + + R+  G
Sbjct:   29 PPGPKGLPIIGNLHQFGRFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETPTSSVNLRKVIFTFAASIICRLSFG 187          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21
Identity = 53/162 (32.72%), Postives = 87/162 (53.70%), Query Frame = 3
Query:  165 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGT 650
            P P   P++GNL  L   PH+S+  L+  +GPLM L  G                LK HD  F++RP +   + + Y  +++   PYG  WR ++ +S +HL S K +  ++ VRQEE+ ++   +  + ++PVNL++ L+    + + RV LG R +G GT
Sbjct:   31 PSPPRLPLIGNLHQLSQHPHRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSKPVNLSKILSSLTNDVICRVALG-RKYGVGT 191          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 53/158 (33.54%), Postives = 82/158 (51.90%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLG---PMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 626
            PPGP   PI+GNL  L     +P Q++  L R +GPLM+L+LG              + +K HD +F  RP     + + Y   DI F PYG  WR +RKI ++ L S K +  + H+RQ+E   L +++ S+   P++L+ +L   +   + R   G
Sbjct:   34 PPGPWRLPIIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSSAGSPIDLSGKLFSLLGTTVSRAAFG 191          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 57/162 (35.19%), Postives = 85/162 (52.47%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVFG 641
            PPGP   PI+GNL  LG  PH S+  L+  +GPLM LR G              + LK  D+   +RP  +    + YN +DI F PY   WR +RK++ V L++ K +  ++H R+EE+A L   +  A +  +PVNL  +L     + + RV+ G  + G
Sbjct:   30 PPGPPRLPIIGNLHQLGSKPHSSMFKLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYPARLTYNLKDIGFCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEEVASLVDFITQAASLEKPVNLNTKLMKLSGSVICRVVFGINLKG 191          
The following BLAST results are available for this feature:
BLAST of FC920634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
C71AM_ARATH7.872e-2232.52Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C93A1_SOYBN1.028e-2134.25Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C84A1_ARATH1.028e-2132.26Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71AL_ARATH1.343e-2131.06Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71A4_SOLME1.754e-2134.12Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71BX_ARATH2.290e-2134.36Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71B5_ARATH2.290e-2133.96Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71AN_ARATH2.290e-2132.72Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71D8_SOYBN3.907e-2133.54Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71BB_ARATH3.907e-2135.19Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32011A09EF RVDevelop1 Citrus clementina cDNA clone C32011A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920634 ID=FC920634; Name=FC920634; organism=Citrus clementina; type=EST; length=689bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGA
ATGCCCTAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACGGTACC
GGAGGGAGCGACCCGAGGGCTGACGAGTTCAAATCAATG
back to top