FC920634

Overview
NameFC920634
Unique NameFC920634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21
Identity = 53/140 (37.86%), Postives = 82/140 (58.57%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEM----AVLTRALASAGTEPVN 569
            PPGP   PI+GNL  LGP+PH+++  LAR +GP+M LRLG              + LK+HD +  +RP + G K ++Y+ +++ F PYG  WR +RK+ ++ L S + +    + R++EM    A L RA AS  +  +N
Sbjct:   56 PPGPAQLPILGNLHLLGPLPHKNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADLDRAAASKASIVLN 195          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21
Identity = 51/160 (31.87%), Postives = 85/160 (53.12%), Query Frame = 3
Query:  165 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGD 644
            P P   P++GNL  LG  PH+S+  L+  +GPLM L  G                LK HD  F++RP +   + + Y+  D+   PYG  WR ++ +  +HLFS K +  +R VR+EE++++   +  + + PVNL++ L     + + +V LG +  G+
Sbjct:   33 PSPPGLPLIGNLHQLGRHPHRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKSISLPVNLSKILVSLTNDVICKVALGRKYGGE 192          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.664e-21
Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASA 551
            PPGP   PI+GNL  LG   H+S   L++ +GP+M+L  G              + LK HD     RP  +  K  +YNY+DI F  YG  WR +RK++ + LFS K L  +R++R+EE  VL   L+ +
Sbjct:   29 PPGPLGLPIIGNLHQLGKSLHRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKLSKS 158          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 51/156 (32.69%), Postives = 85/156 (54.49%), Query Frame = 3
Query:  165 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLG 626
            P P  +PI+GNL  +G +PHQ++  L++ +GP+M+L LG              Q L++HD +   RP  SG + ++YNY DI F PY   W+ +RK+    LFS K +   + ++ EE+  +  ++A + ++  PVNL  +     V+ + R   G
Sbjct:   32 PCPPGFPIIGNLHQIGELPHQTLWKLSKKYGPVMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSIAESASQKNPVNLNNKCLELTVSVVCRTAFG 187          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 55/161 (34.16%), Postives = 85/161 (52.80%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMP-HQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEP----VNLAQRLNLCVVNALGRVMLG 626
            PPGP+  P++GN+  + G +P H  +  LA  +GPLM+L+LG              + +K HD NFS+RP    ++ ++YN   IVF  +G  WR LRKI +V L + K +  +R +R+EE+A L + +A+  +E      NL Q +         R   G
Sbjct:   44 PPGPRTLPLIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASEEGGSIFNLTQSIYSMTFGIAARAAFG 204          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 53/173 (30.64%), Postives = 89/173 (51.45%), Query Frame = 3
Query:  165 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMA-VLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEF 680
            P P+  PI+GNL  LG +PH+S+  L++ +GP+M L  G                +K HD  +++RP +S    ++Y  +D+ F P+G  WR  + I+ +HL S   +  YR+VR EE A ++ +      +  +NL + L     N + RV LG R + +   G +   ++F
Sbjct:   39 PSPRKLPIIGNLHQLGSLPHRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDSSVINLGEHLCSLTNNIISRVALG-RTYDEKESGIEHIIEQF 210          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGA-KHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG 554
            PP P P PI+G+L  L P PHQ    L+  +GP+++L LG              +FLK H+  FSNRP N+ A + + Y +QD +F PYGP W+ ++K+    L  G  LD +  VRQ E     + +   G
Sbjct:   32 PPSPMPLPIIGHLHLLSPTPHQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRVLQKG 163          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPN-SGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 626
            PPGP   PI+GN   L G   H  +  LA+ +GPLM+L++G              +  + HD  F++RP N    K ++Y++ D+V  PYG  WR LRKIS + L S K++  +R +R+EE+    +++ S     +NL++ ++L +     R   G
Sbjct:   27 PPGPPQIPILGNAHQLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSKEGTRINLSKEISLLIYGITTRAAFG 183          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 52/158 (32.91%), Postives = 81/158 (51.27%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEE---MAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 626
            PP P+  PI+GNL  LG  PH+S+  L++ +GP+M L LG                +K +D  +SNRP +  A  + Y  +D+ F P+G  WR +R I+ +HL S K +  YR  R+EE   M    + ++++ +   +L         N + RV LG
Sbjct:   26 PPSPRKLPIIGNLHQLGLHPHRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSSSATDLRDLFCWLAYNIINRVALG 183          
BLAST of FC920634 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 48/136 (35.29%), Postives = 76/136 (55.88%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVN 569
            PPGP   PI+GNL  LG + ++S   +++ +GP++ LRLG              + LK HD     RP  +      YN++DI F P+G  WR +RKI+++ LFS K L  +R++R+EE  +L + ++ +  E  N
Sbjct:   29 PPGPIGLPIIGNLHQLGKLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQN 164          
The following BLAST results are available for this feature:
BLAST of FC920634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
C71E1_SORBI5.102e-2137.864-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71AQ_ARATH5.102e-2131.88Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH6.664e-2138.46Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71BW_ARATH1.485e-2032.69Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71DA_SOYBN2.532e-2034.16Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71A2_SOLME2.532e-2030.64Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C93A3_SOYBN3.307e-2037.12Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71DC_CATRO3.307e-2033.12Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71A3_SOLME3.307e-2032.91Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C71BZ_ARATH4.319e-2035.29Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32011A09EF RVDevelop1 Citrus clementina cDNA clone C32011A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920634 ID=FC920634; Name=FC920634; organism=Citrus clementina; type=EST; length=689bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGA
ATGCCCTAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACGGTACC
GGAGGGAGCGACCCGAGGGCTGACGAGTTCAAATCAATG
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