FC920635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920635 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.454e-11 Identity = 54/201 (26.87%), Postives = 93/201 (46.27%), Query Frame = 1 Query: 1 EQLQGHESGLFAIYDGHLGETVPAYLQEHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGQGWIHCWYCNFDKWAKVMGSQRWRFSSSSFNGWRCS-------SYDYRP*SEH*TREH*G*SAALSLICQAMSLELMGSWQFLVPLETESLISHLRSDPDIQNTILYGRCDILVLARDGLWKVMSNQEAVDIAR 582 + + G GLF ++DGH G V Y++++LFS++L+ +F D + +I AY+ TD L S Q C + A ++G + + + C S D++P T E A + A + + G + L ++ DP+I+ ++ + L+LA DGLW V++N+EAVD+ R Sbjct: 49 DSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQ----CG--STASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQ---TDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTR 240
BLAST of FC920635 vs. ExPASy Swiss-Prot
Match: P2C76_ARATH (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.891e-11 Identity = 52/196 (26.53%), Postives = 92/196 (46.94%), Query Frame = 1 Query: 7 LQGHESGLFAIYDGHLGETVPAYLQEHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDL----GQGWIHCWYCNFDKWAKVMGSQRWRFSSSSFNGWRCSSYDYRP*SEH*TREH*G*SAALSLICQAMSLELMGSWQFLVPLETESLISHLRSDPDIQNTILYGRCDILVLARDGLWKVMSNQEAVDIAR 582 ++G +F I+DGH G YL+EHLF+N++K +F D + ++++ Y++TD A L D G + +G R S + S D++P + + E +A +I A + + G L + ++P+IQ+ + ++LVLA DGLW V+ N++AV +A+ Sbjct: 125 IEGQAVCMFGIFDGHGGSRAAEYLKEHLFNNLMKHPQFLTDTKLALNETYKQTDVAFLESEKDTYRDDGSTASAAVLVGNHLYVANVGDSRTIVSKA--GKAIALSDDHKP---NRSDERKRIESAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEIDHEAELLVLASDGLWDVVPNEDAVALAQ 315
BLAST of FC920635 vs. ExPASy Swiss-Prot
Match: PPM1A_BOVIN (Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2 SV=1) HSP 1 Score: 35.4242 bits (80), Expect = 7.895e-11 Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 1 Query: 31 FAIYDGHLGETVPAYLQEHLFSNILKEEEF 120 FA+YDGH G V Y EHL +I ++F Sbjct: 56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDF 85 HSP 2 Score: 31.9574 bits (71), Expect = 7.895e-11 Identity = 18/45 (40.00%), Postives = 23/45 (51.11%), Query Frame = 2 Query: 203 RGGSTAGTAILINGQRLWAANVGDSRAVLSTAGVAVHMTTDHDPN 337 R GSTA +LI+ Q + N GDSR +L T DH P+ Sbjct: 124 RSGSTA-VGVLISPQHTYFINCGDSRGLLCRNRKVYFFTQDHKPS 167 HSP 3 Score: 30.4166 bits (67), Expect = 7.895e-11 Identity = 17/48 (35.42%), Postives = 26/48 (54.17%), Query Frame = 1 Query: 442 TESLISHLRSDPDIQNTILYGRCD-ILVLARDGLWKVMSNQEAVDIAR 582 TE L+S +P++ + D ++LA DG+W VM N+E D R Sbjct: 211 TEQLVS---PEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVR 255 HSP 4 Score: 27.7202 bits (60), Expect = 7.895e-11 Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 396 VPRVNGQLAVSRAFGD 443 + RVNG LAVSRA GD Sbjct: 184 IQRVNGSLAVSRALGD 199 The following BLAST results are available for this feature:
BLAST of FC920635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920635 ID=FC920635; Name=FC920635; organism=Citrus clementina; type=EST; length=583bpback to top |