FC920647
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_SHELP (60 kDa chaperonin OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=groL PE=3 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.162e-71 Identity = 139/238 (58.40%), Postives = 181/238 (76.05%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG++ EN L VVEGMQFDRGY+SPYF+ E +VE EN +LLVDKKI+N R+L+ +LE + P++IIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +E+GL L+K E LG A +VV+TKD TTI+ Q+ +S RVAQI+ E + DY+REKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELENPYILLVDKKISNIRELLPILEGLAKTGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDDTTIIDGTGEQEQISARVAQIKIQAEESTSDYDREKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_PSEMY (60 kDa chaperonin OS=Pseudomonas mendocina (strain ymp) GN=groL PE=3 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.162e-71 Identity = 139/238 (58.40%), Postives = 175/238 (73.53%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG EN L VVEGMQFDRGY+SPYF+ + M E E LLLVDKKI+N R+L+ VLE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +EVGL+L+ E LGNA +VVL KD TTI+ Q + RVAQIR +E DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMDKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLESATLEHLGNAKRVVLNKDNTTIIDGAGAQADIEARVAQIRKQVEETSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_PROMH (60 kDa chaperonin OS=Proteus mirabilis (strain HI4320) GN=groL PE=3 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.518e-71 Identity = 141/238 (59.24%), Postives = 179/238 (75.21%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG E+ L VVEGMQFDRGY+SPYF+ E E EN +LLVDKK++N R+L+ VLE + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILT GTVI +E+G+ L+K E LG A +VV+ KDTTTI+ Q+A+S RVAQIR IE+A DY+REKL ER+AKL+GGVAVI+VGA TE E+K +R+ DAL+A Sbjct: 165 AMEKVGKEGVITVEEGTGLEDELDVVEGMQFDRGYLSPYFINKPETGTAELENPFILLVDKKVSNIRELLPVLEGVAKANKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTNGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGLGEQEAISGRVAQIRQQIEDATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKRARVDDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_ALTMD (60 kDa chaperonin OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=groL PE=3 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.518e-71 Identity = 137/238 (57.56%), Postives = 179/238 (75.21%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG+ GV+T+EEG++ +N L VVEGMQFDRGY+SPYF+ + E VE +N +LLVDKKI+N R+L+ LE + P++IIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +E+GL L+KV E LG A +VV+ KD TT+V Q+A+ R AQI+ IE + DY++EKL ER+AKLSGGVAVI+VGA TE E+K + + DAL+A Sbjct: 165 AMEKVGKEGVITVEEGQALQNELDVVEGMQFDRGYLSPYFINNQENGTVELDNPFILLVDKKISNIRELLPTLEGVAKAGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEIGLELEKVQLEDLGTAKRVVINKDNTTVVDGNGDQEAIEGRCAQIKGQIEESSSDYDKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKDRVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_SHEAM (60 kDa chaperonin OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=groL PE=3 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.382e-71 Identity = 137/238 (57.56%), Postives = 179/238 (75.21%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG++ EN L VVEGMQFDRGY+SPYF+ E AVE +N +LLVDKKI+N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +E+GL L+K E LG A +VV+TKD TTI+ ++ + RV QI+ IE DY+REKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGAVELDNPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGAEEQIKARVGQIKQQIEETTSDYDREKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH602_SYNP6 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groL2 PE=3 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.382e-71 Identity = 141/238 (59.24%), Postives = 173/238 (72.69%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 A++KV + GV+T+EE KS L VVEGMQFDRGY+SPYFVTD ++ VEY+N +LL DKKI + +DL+ VLED R P+LIIAEDIE EALATLVVNK RG L A+KAP FG+R+ L DIA+LTGG VI +EVGL+L VLG A K+ ++KDTT IV + V+ R+AQIR +E + DY+REKL ERIAKL+GGVAVI+VGA TETELK R+ DALNA Sbjct: 164 AVAKVTKDGVITVEESKSLATELEVVEGMQFDRGYLSPYFVTDQDRQVVEYDNPLILLTDKKIASIQDLVPVLEDVARAGRPLLIIAEDIEGEALATLVVNKARGVLNTVAVKAPAFGDRRKAILQDIAVLTGGQVISEEVGLSLADANSSVLGKAQKITISKDTTIIVAGDENKADVAARIAQIRRSLEETDSDYDREKLQERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNA 401
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_PSEU5 (60 kDa chaperonin OS=Pseudomonas stutzeri (strain A1501) GN=groL PE=3 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.417e-71 Identity = 138/238 (57.98%), Postives = 177/238 (74.37%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM +VG+ GV+T+EEG EN L VVEGMQFDRGY+SPYF+ + M E +N LLLVDKKI+N R+L+ VLE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +EVGL+L+ E LGNA +VVL K+ TTI+ Q + RVAQIR IE+ DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMERVGKEGVITVEEGSGFENELSVVEGMQFDRGYLSPYFINKPDTMVAELDNPLLLLVDKKISNIRELLPVLEGVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLETATLEHLGNAKRVVLNKENTTIIDGAGAQADIEARVAQIRKQIEDTTSDYDKEKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_NITOC (60 kDa chaperonin OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=groL PE=3 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.417e-71 Identity = 133/238 (55.88%), Postives = 179/238 (75.21%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG +N L VVEGMQFDRGY+SPYF+TD + MA + ++ +L+ DKKI+N RDL+ VLE + P+L+I+ED+E EALATLVVN +RG +K+ A+KAPGFG+R+ L+DIA+LTGGTVI +EVGL+LDKV + LG A K+ + K+ TTIV + D + RV Q+R IE A DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMDKVGKEGVITVEEGSGLDNELEVVEGMQFDRGYLSPYFITDQQSMAADLDDPYILIHDKKISNIRDLLPVLESVAKAGKPLLVISEDVEGEALATLVVNTIRGIVKVCAVKAPGFGDRRKAMLEDIAVLTGGTVISEEVGLSLDKVTLDDLGRAKKITVNKENTTIVDGAGSADDIKARVEQVRIQIEEATSDYDKEKLQERVAKLAGGVAVIKVGAATEMEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_ALCBS (60 kDa chaperonin OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=groL PE=3 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.417e-71 Identity = 140/238 (58.82%), Postives = 179/238 (75.21%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG+S +N L VVEGMQFDRGY+SPYF+ + EKM VE E+ +LLVDKKI+N R+L+ LE+ + P+LIIAEDIE EALATLVVN +RG +K AA+KAPGFG+R+ L DIAILTGGTVI +EVGL+L+ E LG A KV + K+ TTIV Q + RV QIR IEN+ DY++EKL ER+AKL+GGVAVI++GA TE E+K +++ DAL+A Sbjct: 164 AMEKVGQEGVITVEEGQSLQNELDVVEGMQFDRGYLSPYFINNQEKMQVELEDPYILLVDKKISNIRELLPALENVAKAGKPLLIIAEDIEGEALATLVVNNMRGIIKCAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLENASLEDLGTAKKVNIDKENTTIVDGAGQQADIDGRVEQIRKEIENSSSDYDKEKLQERVAKLAGGVAVIKIGAATEIEMKEKKARVDDALHA 401
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_PSEA6 (60 kDa chaperonin OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=groL PE=3 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 5.769e-71 Identity = 135/238 (56.72%), Postives = 180/238 (75.63%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG+ GV+T+EEG+S +N L VVEGMQFDRGY+SPYF+ + E VE ++ +LLVDKK++N R+L+ LE + + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+A LTGGTVI +E+GL L+KV E LG A +VV+ KD TT+V ++A+ RVAQIR IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+K + + DAL+A Sbjct: 165 AMDKVGKEGVITVEEGQSLQNELEVVEGMQFDRGYLSPYFMNNQENGTVELDSPFILLVDKKVSNIRELLPTLEAVAKASKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDLATLTGGTVISEEIGLELEKVTLEDLGTAKRVVINKDNTTVVDGAGEEEAIQGRVAQIRAQIEESSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHA 402 The following BLAST results are available for this feature:
BLAST of FC920647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920647 ID=FC920647; Name=FC920647; organism=Citrus clementina; type=EST; length=718bpback to top |