FC920647
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH601_VIBCH (60 kDa chaperonin 1 OS=Vibrio cholerae GN=groL1 PE=3 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.285e-70 Identity = 136/238 (57.14%), Postives = 180/238 (75.63%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVGR GV+T+EEG++ ++ L VVEGMQFDRGY+SPYF+ + E +VE +N +LLVDKKI+N R+L+ VLE + + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGG VI +E+GL L+K E LG A +V +TK+ +TI+ Q A+ RVAQIR IE A DY++EKL ER+AKL+GGVAVI+VGA TE E+K + + DAL+A Sbjct: 165 AMEKVGRDGVITVEEGQALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGVAKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVVISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_SHESH (60 kDa chaperonin OS=Shewanella sediminis (strain HAW-EB3) GN=groL PE=3 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 1.678e-70 Identity = 135/238 (56.72%), Postives = 180/238 (75.63%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG++ EN L VVEGMQFDRGY+SPYF+ E +VE E+ +LLVDKK++N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +E+GL L+K E LG A +V++TKD TTI+ QD + RVAQI+ E + DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELESPFILLVDKKVSNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVIITKDDTTIIDGTGEQDQIKARVAQIKIQAEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_VIBHB (60 kDa chaperonin OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=groL PE=3 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.192e-70 Identity = 136/238 (57.14%), Postives = 180/238 (75.63%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVGR GV+T+EEG++ ++ L VVEGMQFDRGY+SPYF+ + E +VE EN +LL+DKK++N R+L+ LE + + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGG VI +EVGL L+KV E LG A +V +TK+ TTI+ + + RVAQIR IE+A DY++EKL ER+AKL+GGVAVI+VGA TE E+K + + DAL+A Sbjct: 165 AMEKVGRDGVITVEEGQALQDELDVVEGMQFDRGYLSPYFINNQEAGSVELENPFILLIDKKVSNIRELLPALEAVAKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGIVISEEVGLELEKVALEDLGQAKRVAITKENTTIIDGMGEEAMIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_CAMFF (60 kDa chaperonin OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=groL PE=3 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.192e-70 Identity = 138/238 (57.98%), Postives = 176/238 (73.95%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG+ GV+T+EE KS + L VVEGMQFDRGY+SPYF+T++EKM VE + +LL DKKITN +DL+ VLE + P+LI+AEDIE EALATLVVNKLRG L I+A+KAPGFG+R+ L+DIAILTGG VI +E+G L+ + LG A +VV+ KD TTIV +D++ R+ QI+ I DY++EKL ER+AKLSGGVAVI+VGA TETE+K + + DALNA Sbjct: 164 AMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITNAEKMQVELSSPFILLFDKKITNLKDLLPVLEQIQKTGKPLLIVAEDIEGEALATLVVNKLRGVLNISAVKAPGFGDRRKAMLEDIAILTGGEVISEELGRTLESASLQDLGQADRVVIDKDNTTIVNGAGDKDSIEARINQIKAQIAETTSDYDKEKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALNA 401
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_CAMC1 (60 kDa chaperonin OS=Campylobacter concisus (strain 13826) GN=groL PE=3 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.192e-70 Identity = 140/238 (58.82%), Postives = 174/238 (73.11%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG+ GV+T+EE KS ++ L VVEGMQFDRGY+SPYF+T+ EKM VE N +LL DKKITN +DL+ VLE + P+LIIAEDIE EALATLVVNKLRG L I+A+KAPGFG+R+ L+DIAILTGG VI +E+G L+ LG AS VV+ KD TTIV + A+ R+ QI+ I DY++EKL ER+AKLSGGVAVI+VGA TETE+K + + DAL+A Sbjct: 164 AMEKVGKDGVITVEEAKSIQDELSVVEGMQFDRGYLSPYFITNPEKMQVELSNPFILLFDKKITNLKDLLPVLEQVQKSGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVKAPGFGDRRKAMLEDIAILTGGEVISEELGRTLESATINDLGQASSVVIDKDNTTIVNGAGEKSAIDARITQIKAQIAETTSDYDKEKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSA 401
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH601_CHRVO (60 kDa chaperonin 1 OS=Chromobacterium violaceum GN=groL1 PE=3 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.192e-70 Identity = 136/238 (57.14%), Postives = 175/238 (73.53%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG+ GV+T+E+GKS +N L VVEGMQFDRGY+SPYF+TD EK E+ +LL DKKI+N RDL+ VLE + P+LI+AED+E EALATLVVN +RG LK+AA+KAPGFG+R+ L+DIAILTGGTVI +E GL L+K G LG+A +V + K+ TTI+ + + RV IR I+ A DY+REKL ER+AKLSGGVAVI++GA TE E+K + + DAL+A Sbjct: 165 AMDKVGKEGVITVEDGKSLDNELAVVEGMQFDRGYLSPYFITDPEKQTAVLEDPLVLLYDKKISNIRDLLPVLEQVAKAGKPLLIVAEDVEGEALATLVVNSMRGILKVAAVKAPGFGDRRKAMLEDIAILTGGTVIAEETGLTLEKAGLAELGSAKRVEIGKENTTIIDGAGDKAKIDARVQAIRAQIDAATSDYDREKLQERVAKLSGGVAVIRIGAATEVEMKEKKDRVDDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_PSEST (60 kDa chaperonin OS=Pseudomonas stutzeri GN=groL PE=3 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.863e-70 Identity = 136/238 (57.14%), Postives = 177/238 (74.37%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM +VG+ GV+T+EEG EN L VVEGMQFDRGY+SPYF+ + M E ++ LLLVDKKI+N R+L+ VLE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +EVGL+L+ E LGNA +VVL K+ TTI+ Q + RVAQIR +E+ DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMERVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDSPLLLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLETATLEHLGNAKRVVLNKENTTIIDGAGQQADIEARVAQIRKQVEDTTSDYDKEKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_PELCD (60 kDa chaperonin OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=groL PE=3 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.863e-70 Identity = 134/238 (56.30%), Postives = 178/238 (74.79%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EE K+ E L VEGMQFDRGY+SPYFVTD+E+M E+ +L+ DKKI+N RD+IN+LE + P+LIIAEDIE EALATLVVN+LRG L +AA+KAPGFG+R+ L+DIAILTGG VI +EVG L+ ++LGNA ++V+ K+ +TI+ ++ + RV QIR IE + DY+REKL ER+AKL GGVAV++VGA TETE+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEAKAMETSLETVEGMQFDRGYLSPYFVTDAERMEAVMEDAMILIHDKKISNMRDMINILEAVAKQGRPLLIIAEDIEGEALATLVVNRLRGTLNVAAVKAPGFGDRRKAMLEDIAILTGGKVISEEVGFKLENATIDMLGNAKRIVIDKENSTIIDGAGSEVDIQGRVKQIRAQIEETKSDYDREKLQERLAKLVGGVAVVKVGAATETEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_GEOMG (60 kDa chaperonin OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=groL PE=3 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.863e-70 Identity = 139/239 (58.16%), Postives = 175/239 (73.22%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIV-GDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EE K+ E L VEGMQFDRGY+SPYFVTD E+M EN +L+ DKKI+N +DL+ +LE + P+LIIAEDIE EALATLVVNKLRG L I A+KAPGFG+R+ L+DIA+LTGG VI +E+G L+ ++LG A +V + KD TTI+ GDGS D + RV QIR IE DY+REKL ER+AKL GGVAVI+VGA TETE+K +++ DAL+A Sbjct: 164 AMEKVGKEGVITVEEAKAMETSLETVEGMQFDRGYLSPYFVTDPERMEASLENANILIHDKKISNMKDLLPILEQTAKSGRPLLIIAEDIEGEALATLVVNKLRGVLNICAVKAPGFGDRRKAMLEDIAVLTGGKVISEELGFKLENATFDMLGTAKRVTIDKDNTTIIDGDGSEAD-IQGRVKQIRAQIEETSSDYDREKLQERLAKLVGGVAVIKVGAATETEMKEKKARVEDALHA 401
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_GEOLS (60 kDa chaperonin OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=groL PE=3 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.863e-70 Identity = 138/239 (57.74%), Postives = 177/239 (74.06%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIV-GDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EE K+ E L VEGMQFDRGY+SPYFV+D E+M EN +L+ DKKI+N +D++ VLE + P++IIAEDIE EALATLVVNKLRG L + A+KAPGFG+R+ L+DIAILTGG VI +E+G L+ E+LG A ++V+ KD TTI+ GDGS D + RV QIR IE+ DY+REKL ER+AKL GGVAVI+VGA TETE+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEAKAMETSLETVEGMQFDRGYLSPYFVSDPERMEATLENATILIYDKKISNMKDMLPVLEQTAKSGRPLMIIAEDIEGEALATLVVNKLRGVLNVCAVKAPGFGDRRKAMLEDIAILTGGKVISEEMGFKLENTTMEMLGRAKRIVVDKDNTTIIDGDGSEAD-IQGRVKQIRAQIEDTTSDYDREKLQERLAKLVGGVAVIKVGAATETEMKEKKARVEDALHA 402 The following BLAST results are available for this feature:
BLAST of FC920647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920647 ID=FC920647; Name=FC920647; organism=Citrus clementina; type=EST; length=718bpback to top |