FC920647
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_CAMHC (60 kDa chaperonin OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=groL PE=3 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.863e-70 Identity = 140/238 (58.82%), Postives = 175/238 (73.53%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG+ GV+T+EE KS + L VVEGMQFDRGY+SPYF+TD+EKM VE + +LL DKKITN +DL+ VLE + P+LIIAEDIE EALATLVVNKLRG L I+A+KAPGFG+R+ L+DIAILTGGTVI +E+G L+ LG A ++++ KD TTIV +D + RV QI+ I DY+REKL ER+AKLSGGVAVI+VGA TETE+K + + DAL+A Sbjct: 164 AMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITDAEKMQVELNSPLVLLFDKKITNLKDLLPVLEQVQKTGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVKAPGFGDRRKAMLEDIAILTGGTVISEELGRTLESASIADLGKAERILIDKDNTTIVNGAGKKDDIKARVDQIKAQIAVTSSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSA 401
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH602_SINMW (60 kDa chaperonin 2 OS=Sinorhizobium medicae (strain WSM419) GN=groL2 PE=3 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.863e-70 Identity = 137/238 (57.56%), Postives = 180/238 (75.63%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG GV+T+EE K+AE L VVEGMQFDRGY+SPYF+T+ EKM VE E+ +LL +KK++N + +I +LE I+ P+LIIAED+E EALATLVVNKLRG LKIAA+KAPGFG+R+ L+DIAILTGGTVI +E+G L+ ++LG A +V++ K+TTTIV ++ + RVAQI+ IE+ DY+REKL ER+AKL+GGVAVI+VG TE E+K + + DAL+A Sbjct: 165 AMEKVGNEGVITVEEAKTAEIELEVVEGMQFDRGYLSPYFITNQEKMRVELEDAYILLHEKKLSNLQAMIPILESVIQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKSMLEDIAILTGGTVISEELGTKLESATIDILGRAKRVMVEKETTTIVDGAGSKADIGGRVAQIKAQIEDTTSDYDREKLQERLAKLAGGVAVIRVGGSTEIEVKEKKDRVDDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH601_VIBPA (60 kDa chaperonin 1 OS=Vibrio parahaemolyticus GN=groL1 PE=3 SV=2) HSP 1 Score: 265.003 bits (676), Expect = 2.863e-70 Identity = 136/238 (57.14%), Postives = 181/238 (76.05%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM +VGR GV+T+EEG++ ++ L VVEGMQFDRGY+SPYF+ + E +VE EN +LLVDKKI+N R+L+ LE + + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +E+GL L+KV E LG A +V +TK+ +TI+ + + RVAQIR IE+A DY++EKL ER+AKL+GGVAVI+VGA TE E+K + + DAL+A Sbjct: 165 AMERVGRDGVITVEEGQALQDELDVVEGMQFDRGYLSPYFINNQEAGSVELENPFILLVDKKISNIRELLPTLEAVAKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEIGLELEKVTLEDLGQAKRVSITKENSTIIDGAGEEAMIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH601_METCA (60 kDa chaperonin 1 OS=Methylococcus capsulatus GN=groL1 PE=3 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.863e-70 Identity = 131/238 (55.04%), Postives = 180/238 (75.63%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+E+G EN L +VEGMQFDRGY+SPYF+ + + M+ E EN +L+ +KKI+N R+L+ VLE + P++I+AED+E EALATLVVN +RG LK+AA+KAPGFG+R+ L+DIA+LTGGTVI +++GL+L+K LG A KV +TK+ TTI+ + +A+ RVAQIR IE+ DY+REKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMDKVGKEGVITVEDGSGLENQLDIVEGMQFDRGYLSPYFINNQQSMSAELENPFILINEKKISNIRELLPVLEGVAKAGRPLVIVAEDVEGEALATLVVNNMRGILKVAAVKAPGFGDRRKAMLEDIAVLTGGTVISEDIGLSLEKATLADLGTAKKVQITKENTTIIDGAGSSEAIQGRVAQIRKQIEDTTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_SILST (60 kDa chaperonin OS=Silicibacter sp. (strain TM1040) GN=groL PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.739e-70 Identity = 136/238 (57.14%), Postives = 175/238 (73.53%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG GV+T+EE K E VVEGMQFDRGY+SPYFVT+++KM E E+C +LL +KK+++ + ++ +LE I+ P+LIIAED+E EALATLVVNKLRG LKIAA+KAPGFG+R+ L DIAILTGG VI +++G+ L+ V ++LG A K+ +TKD TTIV + + RVAQIR IE DY+REKL ER+AKL+GGVAVI+VG TE E+K R + DALNA Sbjct: 165 AMQKVGNDGVITVEENKGLETETDVVEGMQFDRGYLSPYFVTNADKMTAELEDCLILLHEKKLSSLQPMVPLLEQVIQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLESVTMDMLGTAKKIQITKDETTIVDGAGEKAEIEARVAQIRAQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_SACD2 (60 kDa chaperonin OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=groL PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.739e-70 Identity = 136/238 (57.14%), Postives = 175/238 (73.53%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM+KVG+ GV+T+EEG EN L VVEGMQFDRGY+SPYF+ + E M+VE E +LLVDKKI+N R+L+ VLE + P++I+AED+E EALATLVVN +RG +K+ A KAPGFG+R+ L DIAILTGGTVI +EVGL L+ E LG+A +V +TK+ +TIV + RVAQIR IE DY+REKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 164 AMAKVGKEGVITVEEGSGLENELDVVEGMQFDRGYLSPYFINNQESMSVEIEQPYILLVDKKISNIRELLPVLEAVAKSGKPLVIVAEDVEGEALATLVVNNMRGIVKVTACKAPGFGDRRKAMLQDIAILTGGTVISEEVGLDLESATLEHLGSAKRVTMTKENSTIVDGAGVAADIESRVAQIRAQIEETSSDYDREKLQERVAKLAGGVAVIKVGAMTEVEMKEKKARVEDALHA 401
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_HELPJ (60 kDa chaperonin OS=Helicobacter pylori J99 GN=groL PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.739e-70 Identity = 137/238 (57.56%), Postives = 178/238 (74.79%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG+ GV+T+EE K E+ L VVEGMQFDRGY+SPYFVT++EKM + +N +LL DKKI++ +D++ +LE ++ P+LIIAEDIE EAL TLVVNKLRG L IAA+KAPGFG+R+ + L DIAILTGG VI +E+GL+L+ E LG A ++V+ KD TTIV D V RVAQI+T I + DY++EKL ER+AKLSGGVAVI+VGA +E E+K + + DAL+A Sbjct: 164 AMEKVGKDGVITVEEAKGIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTMKEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAILTGGQVISEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSDDVKDRVAQIKTQIASTTSDYDKEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSA 401
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_HELPH (60 kDa chaperonin OS=Helicobacter pylori (strain HPAG1) GN=groL PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.739e-70 Identity = 137/238 (57.56%), Postives = 178/238 (74.79%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG+ GV+T+EE K E+ L VVEGMQFDRGY+SPYFVT++EKM + +N +LL DKKI++ +D++ +LE ++ P+LIIAEDIE EAL TLVVNKLRG L IAA+KAPGFG+R+ + L DIAILTGG VI +E+GL+L+ E LG A ++V+ KD TTIV D V RVAQI+T I + DY++EKL ER+AKLSGGVAVI+VGA +E E+K + + DAL+A Sbjct: 164 AMEKVGKDGVITVEEAKGIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTMKEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAILTGGQVISEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSDDVKDRVAQIKTQIASTTSDYDKEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSA 401
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH602_VIBVY (60 kDa chaperonin 2 OS=Vibrio vulnificus (strain YJ016) GN=groL2 PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.739e-70 Identity = 136/238 (57.14%), Postives = 178/238 (74.79%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVGR GV+T+EEG+ N L VVEGMQFDRGY+SPYF+T+ + AVE +N +LLVDKK+++ R+L+ VLE + + +LIIAEDI+ EALATLVVN LRG ++ AA+KAPGFG+ + L+DIA+LT GTVI +E+GL L+K E LG+A KV +TKDTTTIVG + + A+ RVA I IEN Y++EKL +RIAKLSGGVAVI++GA TE E+K + + DAL+A Sbjct: 165 AMEKVGRNGVITVEEGQGLSNELSVVEGMQFDRGYLSPYFITNQDSGAVELDNPYILLVDKKVSSIRELLPVLESVAKASRSLLIIAEDIDGEALATLVVNNLRGIVRAAAVKAPGFGDNRKAMLEDIAVLTAGTVISEEIGLELEKATIEQLGSAKKVTITKDTTTIVGGAAQESAIRDRVATIEKQIENTTSSYDKEKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH602_VIBVU (60 kDa chaperonin 2 OS=Vibrio vulnificus GN=groL2 PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.739e-70 Identity = 136/238 (57.14%), Postives = 178/238 (74.79%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVGR GV+T+EEG+ N L VVEGMQFDRGY+SPYF+T+ + AVE +N +LLVDKK+++ R+L+ VLE + + +LIIAEDI+ EALATLVVN LRG ++ AA+KAPGFG+ + L+DIA+LT GTVI +E+GL L+K E LG+A KV +TKDTTTIVG + + A+ RVA I IEN Y++EKL +RIAKLSGGVAVI++GA TE E+K + + DAL+A Sbjct: 165 AMEKVGRNGVITVEEGQGLSNELSVVEGMQFDRGYLSPYFITNQDSGAVELDNPYILLVDKKVSSIRELLPVLESVAKASRSLLIIAEDIDGEALATLVVNNLRGIVRAAAVKAPGFGDNRKAMLEDIAVLTAGTVISEEIGLELEKATIEQLGSAKKVTITKDTTTIVGGAAQESAIRDRVATIEKQIENTTSSYDKEKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHA 402 The following BLAST results are available for this feature:
BLAST of FC920647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920647 ID=FC920647; Name=FC920647; organism=Citrus clementina; type=EST; length=718bpback to top |