FC920647
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_SHESW (60 kDa chaperonin OS=Shewanella sp. (strain W3-18-1) GN=groL PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 134/238 (56.30%), Postives = 180/238 (75.63%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG++ EN L VVEGMQFDRGY+SPYF+ E +VE ++ +LLVDKKI+N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+AILTGGTVI +E+GL L+K E LG A +VV+TKD TTI+ Q + RV+QI+ IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_SHESR (60 kDa chaperonin OS=Shewanella sp. (strain MR-7) GN=groL PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 134/238 (56.30%), Postives = 180/238 (75.63%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG++ EN L VVEGMQFDRGY+SPYF+ E +VE ++ +LLVDKKI+N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+AILTGGTVI +E+GL L+K E LG A +VV+TKD TTI+ Q + RV+QI+ IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_SHESM (60 kDa chaperonin OS=Shewanella sp. (strain MR-4) GN=groL PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 134/238 (56.30%), Postives = 180/238 (75.63%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG++ EN L VVEGMQFDRGY+SPYF+ E +VE ++ +LLVDKKI+N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+AILTGGTVI +E+GL L+K E LG A +VV+TKD TTI+ Q + RV+QI+ IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_SHESA (60 kDa chaperonin OS=Shewanella sp. (strain ANA-3) GN=groL PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 134/238 (56.30%), Postives = 180/238 (75.63%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG++ EN L VVEGMQFDRGY+SPYF+ E +VE ++ +LLVDKKI+N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+AILTGGTVI +E+GL L+K E LG A +VV+TKD TTI+ Q + RV+QI+ IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_SHEPC (60 kDa chaperonin OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=groL PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 134/238 (56.30%), Postives = 180/238 (75.63%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG++ EN L VVEGMQFDRGY+SPYF+ E +VE ++ +LLVDKKI+N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+AILTGGTVI +E+GL L+K E LG A +VV+TKD TTI+ Q + RV+QI+ IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_SHEON (60 kDa chaperonin OS=Shewanella oneidensis GN=groL PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 134/238 (56.30%), Postives = 180/238 (75.63%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG++ EN L VVEGMQFDRGY+SPYF+ E +VE ++ +LLVDKKI+N R+L+ +LE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L D+AILTGGTVI +E+GL L+K E LG A +VV+TKD TTI+ Q + RV+QI+ IE + DY++EKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_RHILW (60 kDa chaperonin OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=groL PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 136/238 (57.14%), Postives = 178/238 (74.79%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG GV+T+EE K+AE L VVEGMQFDRGY+SPYFVT+ EKM + E+ +LL +KK++N + ++ VLE ++ P+LIIAED+E EALATLVVNKLRG LKIAA+KAPGFG+R+ L+DIAILTGGTVI +++G+ L+ V ++LG A KV ++K+ TTIV + + RVAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+K + + DALNA Sbjct: 165 AMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMIADLEDVFILLHEKKLSNLQSMLPVLEAVVQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGSGAKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_RHILV (60 kDa chaperonin OS=Rhizobium leguminosarum bv. viciae GN=groL PE=2 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 135/238 (56.72%), Postives = 179/238 (75.21%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG GV+T+EE K+AE L VVEGMQFDRGY+SPYFVT+ EKM + E+ +LL +KK++N + ++ VLE ++ P+LI+AED+E EALATLVVNKLRG LKIAA+KAPGFG+R+ + L+DIAILTGGTVI +++G+ L+ V ++LG A KV ++K+ TTIV + + RVAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+K + + DALNA Sbjct: 165 AMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMIADLEDVFILLHEKKLSNLQSMLPVLEAVVQTGKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKRMLEDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGSGAKTDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_RALEH (60 kDa chaperonin OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=groL PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 135/238 (56.72%), Postives = 175/238 (73.53%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+E+GKS + L VVEGMQFDRGY+SPYF+ + EK V+ +N +LL DKKI+N RDL+ VLE + P+LI+AED+E EALATLVVN +RG LK AA+KAPGFG+R+ L+DIAILTGGTVI +E+GL L+K G LG A ++ + K+ T I+ A+ RV QIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMDKVGKEGVITVEDGKSLADELEVVEGMQFDRGYLSPYFINNPEKQVVQLDNPFVLLFDKKISNIRDLLPVLEQVAKAGRPLLIVAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGTVIAEEIGLTLEKAGLNDLGQAKRIEIGKENTIIIDGAGDAAAIEGRVKQIRAQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_PSEPK (60 kDa chaperonin OS=Pseudomonas putida (strain KT2440) GN=groL PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 135/238 (56.72%), Postives = 173/238 (72.69%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG EN L VVEGMQFDRGY+SPYFV + M E E LLLVDKKI+N R+L+ VLE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA+LTGG VI +E+GL+L+ E LGNA +V+L+K+ TTI+ + RV QIR IE DY+REKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGQVISEEIGLSLETATLEHLGNAKRVILSKENTTIIDGAGADTEIEARVKQIRAQIEETSSDYDREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHA 402 The following BLAST results are available for this feature:
BLAST of FC920647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920647 ID=FC920647; Name=FC920647; organism=Citrus clementina; type=EST; length=718bpback to top |