FC920647
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_PSEPG (60 kDa chaperonin OS=Pseudomonas putida (strain GB-1) GN=groL PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 135/238 (56.72%), Postives = 173/238 (72.69%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG EN L VVEGMQFDRGY+SPYFV + M E E LLLVDKKI+N R+L+ VLE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA+LTGG VI +E+GL+L+ E LGNA +V+L+K+ TTI+ + RV QIR IE DY+REKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGQVISEEIGLSLETATLEHLGNAKRVILSKENTTIIDGAGADTEIEARVKQIRAQIEETSSDYDREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_PSEP1 (60 kDa chaperonin OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=groL PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 135/238 (56.72%), Postives = 173/238 (72.69%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG EN L VVEGMQFDRGY+SPYFV + M E E LLLVDKKI+N R+L+ VLE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA+LTGG VI +E+GL+L+ E LGNA +V+L+K+ TTI+ + RV QIR IE DY+REKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGQVISEEIGLSLETATLEHLGNAKRVILSKENTTIIDGAGADTEIEARVKQIRAQIEETSSDYDREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_PHOLL (60 kDa chaperonin OS=Photorhabdus luminescens subsp. laumondii GN=groL PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 135/238 (56.72%), Postives = 178/238 (74.79%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG E+ L VVEGMQFDRGY+SPYF+ E +VE EN +LLVDKKI+N R+L+ VLE + + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA+LT G VI +E+GL L+K E LG A ++V+ KDTTTI+ +DA+ RV+QI I+ + DY+REKL ER+AKL+GGVAVI+VGA TE E+K +R+ DAL+A Sbjct: 165 AMDKVGKEGVITVEEGTGLEDELDVVEGMQFDRGYLSPYFINKPENGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLLIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLHDIAVLTNGNVISEEIGLELEKATLEDLGQAKRIVINKDTTTIIDGVGEEDAIKGRVSQINQQIKESTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKRARVDDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH605_SINMW (60 kDa chaperonin 5 OS=Sinorhizobium medicae (strain WSM419) GN=groL5 PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 136/238 (57.14%), Postives = 178/238 (74.79%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG GV+T+EE K+AE L VV+GMQFDRGY+SPYFVT+ EKM + E+ +LL +KK++N + ++ VLE ++ P+LIIAED+E EALATLVVNKLRG LKIAA+KAPGFG+R+ L+DIAILTGGTVI +++G+ L+ V ++LG A KV +TK+ TTIV + + RVAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+K + + DALNA Sbjct: 165 AMQKVGNEGVITVEEAKTAETELEVVDGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQAMLPVLEAVVQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSITKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRIDDALNA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH601_RHIEC (60 kDa chaperonin 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL1 PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 8.330e-70 Identity = 136/238 (57.14%), Postives = 178/238 (74.79%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG GV+T+EE K+AE L VVEGMQFDRGY+SPYFVT+ EKM + E+ +LL +KK++N + ++ VLE ++ P+LIIAED+E EALATLVVNKLRG LKIAA+KAPGFG+R+ L+DIAILTGGTVI +++G+ L+ V ++LG A KV ++K+ TTIV + + RVAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+K + + DALNA Sbjct: 165 AMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMIADLEDVFILLHEKKLSNLQSMLPVLEAVVQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGSGAKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_PSEPW (60 kDa chaperonin OS=Pseudomonas putida (strain W619) GN=groL PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.088e-69 Identity = 139/239 (58.16%), Postives = 178/239 (74.48%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDA-VSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EEG EN L VVEGMQFDRGY+SPYFV + M E E+ LLLVDKKI+N R+L+ VLE + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIA+LTGG VI +E+GL L+ E LGNA +V+L+K+ TTI+ DG+ DA + RV QIR IE DY+REKL ER+AKL+GGVAVI+VGA TE E+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELESPLLLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGQVISEEIGLTLETTTLEHLGNAKRVILSKENTTII-DGAGVDADIEARVKQIRAQIEETSSDYDREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_NAUPA (60 kDa chaperonin OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=groL PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.088e-69 Identity = 140/239 (58.58%), Postives = 177/239 (74.06%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIR-GAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG+ GV+T+EEGKS ++ L VVEGMQFDRGY+SPYFVTD+EKM E + +LL DKKI+N +DL+ +LE ++ G P+LIIAEDIE EALATLVVNKLRG L + A+KAPGFG+R+ L DIAILTGG VI +E+G L+ LG A +VV+ K+ TTIV + A+ R+AQI+ IE DY+REKL ER+AKLSGGVAVI+VGA TETE+K + + DAL+A Sbjct: 165 AMDKVGKDGVITVEEGKSLQDELEVVEGMQFDRGYLSPYFVTDTEKMVAELNDAYILLYDKKISNMKDLLPLLEQMVQAGNKPLLIIAEDIEGEALATLVVNKLRGVLNVCAVKAPGFGDRRKAMLQDIAILTGGQVISEELGRTLESATLADLGQAGRVVVDKENTTIVDGRGDKAAIEARIAQIKKEIEETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSA 403
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_HELP2 (60 kDa chaperonin OS=Helicobacter pylori (strain P12) GN=groL PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.088e-69 Identity = 136/238 (57.14%), Postives = 177/238 (74.37%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVG+ GV+T+EE K E+ L VVEGMQFDRGY+SPYFVT++EKM + +N +LL DKKI++ +D++ +LE ++ P+LIIAEDIE EAL TLVVNKLRG L IAA+KAPGFG+R+ + L DIAILTGG VI +E+GL+L+ E LG A ++V+ KD TTIV D V RV QI+T I + DY++EKL ER+AKLSGGVAVI+VGA +E E+K + + DAL+A Sbjct: 164 AMEKVGKDGVITVEEAKGIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTMKEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAILTGGQVISEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSDDVKDRVVQIKTQIASTTSDYDKEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSA 401
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH60_GEOSL (60 kDa chaperonin OS=Geobacter sulfurreducens GN=groL PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.088e-69 Identity = 139/239 (58.16%), Postives = 174/239 (72.80%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIV-GDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELK-RRSESRDALNA 711 AM KVG+ GV+T+EE K+ E L VEGMQFDRGY+SPYFVTD E+M EN +L+ DKKI+N +DL+ VLE + P+LIIAEDIE EALATLVVNKLRG L I A+KAPGFG+R+ L+DIAILTGG VI +E+G L+ ++LG A ++ + KD TTI+ GDG D + RV QIR IE DY+REKL ER+AKL GGVAVI+VGA TETE+K +++ DAL+A Sbjct: 165 AMEKVGKEGVITVEEAKAMETSLETVEGMQFDRGYLSPYFVTDPERMEASLENAMILIHDKKISNMKDLLPVLEQTAKSGRPLLIIAEDIEGEALATLVVNKLRGVLNICAVKAPGFGDRRKAMLEDIAILTGGQVISEEIGNKLENTTMDMLGRAKRITVDKDNTTIIDGDGKEAD-IQGRVKQIRAQIEETTSDYDREKLQERLAKLVGGVAVIKVGAATETEMKEKKARVEDALHA 402
BLAST of FC920647 vs. ExPASy Swiss-Prot
Match: CH601_VIBVY (60 kDa chaperonin 1 OS=Vibrio vulnificus (strain YJ016) GN=groL1 PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.088e-69 Identity = 137/238 (57.56%), Postives = 179/238 (75.21%), Query Frame = 1 Query: 1 AMSKVGRTGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKRRSES-RDALNA 711 AM KVGR GV+T+EEG++ + L VVEGMQFDRGY+SPYF+ + E +VE E+ +LLVDKKI+N R+L+ LE + + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+ L DIAILTGGTVI +EVGL L+K E LG A +V +TK+ TTI+ + + RVAQIR IE+A DY++EKL ER+AKL+GGVAVI+VGA TE E+K + + DAL+A Sbjct: 165 AMEKVGRDGVITVEEGQALHDELDVVEGMQFDRGYLSPYFINNQESGSVELESPFILLVDKKISNIRELLPALEAVAKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLELEKATLEDLGQAKRVSITKENTTIIDGVGEEAMIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHA 402 The following BLAST results are available for this feature:
BLAST of FC920647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920647 ID=FC920647; Name=FC920647; organism=Citrus clementina; type=EST; length=718bpback to top |