FC920649

Overview
NameFC920649
Unique NameFC920649
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14114 contig Ccv1_Contig14114:20..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920649 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.083e-24
Identity = 61/124 (49.19%), Postives = 82/124 (66.13%), Query Frame = 2
Query:  245 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAY 613
            EL + A+++ + G+GILA DES  T G RL  I +ENTE NR+ +R +L +    + Q I G ILF ETLYQ  + GK   ++L E+ IV GIK+D+G  PLAG+N E+  QGLDGL+ R A Y
Sbjct:   15 ELSEIAQSIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFREILFSVDSSINQSIGGVILFHETLYQKDSQGKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQY 138          
BLAST of FC920649 vs. ExPASy Swiss-Prot
Match: ALDOB_HUMAN (Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.083e-24
Identity = 61/124 (49.19%), Postives = 82/124 (66.13%), Query Frame = 2
Query:  245 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAY 613
            EL + A+++ + G+GILA DES  T G RL  I +ENTE NR+ +R +L +    + Q I G ILF ETLYQ  + GK   ++L E+ IV GIK+D+G  PLAG+N E+  QGLDGL+ R A Y
Sbjct:   15 ELSEIAQSIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFREILFSVDSSINQSIGGVILFHETLYQKDSQGKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQY 138          
BLAST of FC920649 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 3.151e-24
Identity = 62/124 (50.00%), Postives = 80/124 (64.52%), Query Frame = 2
Query:  245 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAY 613
            EL + A+ + + G+GILA DES  T G RL  I +ENTE NR+ +R LL +    + Q I G ILF ETLYQ  + G    +VL E+ IV GIK+D+G  PLAG+N E+  QGLDGL+ R A Y
Sbjct:   15 ELSEIAQRIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFRELLFSVDNSISQSIGGVILFHETLYQKDSQGNLFRNVLKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQY 138          
BLAST of FC920649 vs. ExPASy Swiss-Prot
Match: ALDOB_DANRE (Fructose-bisphosphate aldolase B OS=Danio rerio GN=aldob PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.161e-24
Identity = 59/124 (47.58%), Postives = 78/124 (62.90%), Query Frame = 2
Query:  245 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAP-GLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAY 613
            EL   A+ + +PG+GILA DES  T  KR   I +ENTE NR+++R LL +    + + I G ILF ETLYQ +  G     V+ ++ IV GIKVDKG   LAG++ E+  QGLDGL+ R A Y
Sbjct:   15 ELATIAERIVAPGKGILAADESTGTMAKRFQKINVENTEENRRSFRDLLFSVDDSISESIGGVILFHETLYQKSDKGVLFPKVIKDKGIVVGIKVDKGTAGLAGTDGETTTQGLDGLSERCAQY 138          

HSP 2 Score: 21.1718 bits (43), Expect = 6.161e-24
Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 1
Query:  622 GARFAKWRTVVSI 660
            G  FAKWR V+ I
Sbjct:  142 GCDFAKWRCVLKI 154          
BLAST of FC920649 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 4.551e-23
Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 2
Query:  260 AKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAY 613
            A+ + + G+GILA DES  T G RL  I +ENTE NR+A+R +L ++   + + I G ILF ETLYQ  + GK    ++ E+ +V GIK+D G  PLAG+N E+  QGLD LA R A Y
Sbjct:   20 AQRIVASGKGILAADESVGTMGNRLQRINVENTEENRRAFREILFSSDASISKSIGGVILFHETLYQKDSSGKPFPAIIKEKGMVVGIKLDAGTAPLAGTNGETTIQGLDKLAERCAQY 138          
BLAST of FC920649 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.200e-15
Identity = 40/95 (42.11%), Postives = 62/95 (65.26%), Query Frame = 2
Query:  257 TAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLV 541
            TAK +   G+GILA DE+  T G+R   +G+ NTE NR+ +R +L +  G+ +YI G IL +ET  Q++  G  + ++L ++ I  GIK+DKGL+
Sbjct:   13 TAKKILENGKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQTSGSGVPLTELLKKKGIEIGIKLDKGLI 107          
The following BLAST results are available for this feature:
BLAST of FC920649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALDOB_PONAB1.083e-2449.19Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALDOB_HUMAN1.083e-2449.19Fructose-bisphosphate aldolase B OS=Homo sapiens G... [more]
ALDOB_MOUSE3.151e-2450.00Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]
ALDOB_DANRE6.161e-2447.58Fructose-bisphosphate aldolase B OS=Danio rerio GN... [more]
ALDOB_CHICK4.551e-2347.90Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALF_ENCCU1.200e-1542.11Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionC32011C05EF RVDevelop1 Citrus clementina cDNA clone C32011C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920649 ID=FC920649; Name=FC920649; organism=Citrus clementina; type=EST; length=724bp
AAAGATAGTGAAGATAAGATTATAAGTGCTATAAGCTAAGGCCTCTCGAG
CTCAGAACCCACAGCAAGAAGAAGCAAAGAGGAAAATGGCCTCAGCCTCG
GCATCTTTACTCAAGTCATCATCCCCCGTTCTTGACAAGTCTGAGTGGGT
TAAGGGCCAGGCCATCCGCCAGTCTACTGTCTCAGTCCGCAGCCTCCCCA
GTGGCCCCTCTTCCCTCACCATCCGTGCTGGTTCCTATGCCGATGAGCTT
GTCAAGACCGCGAAAACTGTTGCATCACCAGGACGTGGAATTTTGGCCAT
GGATGAGTCAAATGCAACTTGTGGAAAACGCCTTGCCTCAATTGGGTTAG
AGAACACTGAGGCTAACCGCCAGGCATACCGTACCCTCCTTGTTACAGCC
CCTGGTCTTGGACAGTACATCTCTGGTGCCATCCTTTTTGAGGAGACTCT
CTACCAATCCACCACCGATGGCAAGAAGATGGTCGATGTTCTTGTTGAGC
AAAACATTGTCCCCGGTATCAAAGTCGACAAGGGTTTGGTGCCCCTTGCT
GGTTCCAATGATGAGTCATGGTGCCAGGGTCTTGATGGCCTGGCTTCTCG
CACTGCTGCTTACTACCACAGGGAGCTCGTTTCGCCAAATGGCGTACTGT
TGTGAGCATCCCCATGGCCCATCTGCCTTGGCAGTCAAGGAAGCGCCTGG
GGTCTTGCCGCTATGCTGCATGCT
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