FC920654

Overview
NameFC920654
Unique NameFC920654
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:20..684. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.513e-30
Identity = 63/174 (36.21%), Postives = 101/174 (58.05%), Query Frame = 3
Query:  147 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHCVKL 665
            FY +TCP+AE I++ ++K    +   +  S +R  FHDC V  CDASLLLD T   L EK  +     +R+F  +++IKEA+E+ CP  VSCADI++++ RD V   GGP   +K GR+D   +  +  +  +P  + + + +++ F    +    +VAL  SHS+G+  C  +
Sbjct:   27 FYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSI 200          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.282e-30
Identity = 72/175 (41.14%), Postives = 99/175 (56.57%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L   FY +TCP A + I+  V+      +  A S +R  FHDC VQ CDAS+LLD T    SEK    + G  R F  IE+ K  VE+ CPGVVSCADIL ++ RD   A+GGP   +K GRRD   +   + E  LP   D ++ ++  FA+ G+    +VAL  +H++G+  C
Sbjct:   29 LSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQC 203          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.287e-30
Identity = 72/181 (39.78%), Postives = 107/181 (59.12%), Query Frame = 3
Query:  120 EEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD--RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            E +  L  N+Y  TCP  E I+K+ V   +K+   TA + LR  FHDC V+ CDAS+ + S  +  +EK+ D  +S     F  +   K AVE +CPGVVSCADIL L+ RD VV +GGP   ++ GRRDG  S+A  +   LP+    +  +++ FA+ G+    ++AL  +H++G +HC
Sbjct:   27 ESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENED-AEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHC 206          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.598e-30
Identity = 70/171 (40.94%), Postives = 99/171 (57.89%), Query Frame = 3
Query:  144 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            ++Y  TCPQA+ I+   VK      +    + LR  FHDC V+ CD S+LLDS  K  +EK+   +  +  F  I+N K+A+E +CPG+VSCADIL L+ RD V   GGP   +  GR+DGR S+A I  + LP    ++S + + F   G+    LVAL   H++G  HC
Sbjct:   26 HYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEKDGPPNISLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGRISKA-IETRQLPAPTFNISQLRQNFGQRGLSMHDLVALSGGHTLGFAHC 195          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.598e-30
Identity = 69/174 (39.66%), Postives = 104/174 (59.77%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L MNFY ++CP AE I+++ V        + A + +R  FHDC V+ CD S+L++ST    +E++   +  +R F +I+ IK  +E +CPG+VSCADI+ L+ RD VV  GGP   + TGRRDGR S A      +P    +++ +   FA  G+D   LV L  +H++G +HC
Sbjct:   26 LQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGN-AERDATPNLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHC 198          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.312e-30
Identity = 72/175 (41.14%), Postives = 99/175 (56.57%), Query Frame = 3
Query:  132 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            G  + FY  TCP+AE I++  V+         A   LR  FHDC VQ CD S+L+       +EK    + G+R +  I++ K  +E  CPGVVSCADIL L+ RD VV  GG    + TGRRDGR S+A  +   LP   DS+ V  ++FAA G++   LV L+  H++G + C
Sbjct:   31 GTRVGFYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPA---TEKTAFANLGLRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQASDVSN-LPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSEC 201          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.247e-29
Identity = 73/183 (39.89%), Postives = 101/183 (55.19%), Query Frame = 3
Query:  117 NEEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSR-AEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHCV 659
            ++ +  L  +FYK++CP    +++  VK    R      S LR  FHDC V  CD SLLLD T   L EK    S   +R F  I+ IK  VE+ CPG+VSCADIL ++ RD V+ LGGP   +K GRRD   +  A      +P    ++S ++ RF A G+    +VAL  +H++GR  CV
Sbjct:   15 SQSEAQLNRDFYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCV 197          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.247e-29
Identity = 67/175 (38.29%), Postives = 100/175 (57.14%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLS-EKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L M FY  TCP AE I+++ V        + A   +R  FHDC V+ CD S+L+++T      EK    +  +R F +I+ +K A+E +CPG+VSCADI+ L+ RD +VA+GGP   + TGRRDGR S        +P    + + ++  F   G+D   LV L  +H++G +HC
Sbjct:   25 LKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHC 199          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.247e-29
Identity = 70/172 (40.70%), Postives = 98/172 (56.98%), Query Frame = 3
Query:  147 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHCV 659
            FY+++CP A+ I++  V   Y      A S LR  FHDC V  CDAS+LLDS+    SEK  + +    R F  I+ IK A+E ECP  VSCAD+L L  RD +V  GGP   +  GRRD R++      + +P  + ++  +L  F   G+D   LVALL SH++G + C+
Sbjct:   45 FYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCI 216          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.629e-29
Identity = 68/177 (38.42%), Postives = 100/177 (56.50%), Query Frame = 3
Query:  126 DPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            +  L  ++Y  +CP AE II E V+             LR  FHDC ++ CDAS+LLDSTR   +EK+   +  +R+F  IE+ K  +E+ CP  VSCAD++ ++ RD V   GGPY  +  GR+DG  SRA      LP    ++S +++ FAA G+    +V L   H++G +HC
Sbjct:   23 EAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKDGPPNISVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDGTISRANETRN-LPPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFSHC 198          
The following BLAST results are available for this feature:
BLAST of FC920654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER17_ARATH2.513e-3036.21Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PERX_NICSY3.282e-3041.14Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER55_ARATH4.287e-3039.78Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER64_ARATH5.598e-3040.94Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER3_ARATH5.598e-3039.66Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER2_ARAHY7.312e-3041.14Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER67_ARATH1.247e-2939.89Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER39_ARATH1.247e-2938.29Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER36_ARATH1.247e-2940.70Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER66_ARATH1.629e-2938.42Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32011C11EF RVDevelop1 Citrus clementina cDNA clone C32011C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920654 ID=FC920654; Name=FC920654; organism=Citrus clementina; type=EST; length=665bp
GGTTGGTCACCTTTCGTGAGTGAAGAGTAGAAGAGACAATGGGTACGAAA
GCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCTGAG
GTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATTTTT
ACAAGGATACATGCCCTCAGGCCGAGGACATTATCAAGGAACAAGTTAAG
CTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAACAT
TTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGGACT
CGACAAGAAAGACCTTGTCTGAGAAGGAAATGGACAGGAGCTTTGGTATG
AGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTG
CCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCGGTAGAGATG
GCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGA
GATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCA
CAAAGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTG
ACGCCCCTGGACTTGTTGCTCTGCTACGATCTCACAGTGTTGGCAGAACT
CATTGTGTGAAGCTG
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