FC920654

Overview
NameFC920654
Unique NameFC920654
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:20..684. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.844e-28
Identity = 69/176 (39.20%), Postives = 97/176 (55.11%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHCVK 662
            L   FY  TCP A   I+  ++     ++  A   +R +FHDC VQ CDASLLL       SE+    + G+  +  I+  K AVER CPGVVSCADIL ++ RD  VA+GGP   ++ GRRD   S A      LP     +S ++  FA  G++   +VAL  SH++G+  C++
Sbjct:   32 LSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG---SERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIR 204          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.938e-28
Identity = 69/172 (40.12%), Postives = 96/172 (55.81%), Query Frame = 3
Query:  144 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            + Y  +CP    I+++QVK+  K     A S +R  FHDC V  CDAS+LLD T    SEK  +     +R F  I+ IK AVE  CPGVVSCADIL L+ RD V   GGP   +  GR+DG  +        LP   + +  ++ +FAA+G++   +VAL  +H+ G+  C
Sbjct:   33 DIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGTN---SEKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSANN-LPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKC 200          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.167e-27
Identity = 68/174 (39.08%), Postives = 99/174 (56.90%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L +N+Y   CP  E I+  +V+   K   +   + LR IFHDC V  CDAS+LLD      +E+    S  +R F  I++IK  +E+ CPG VSCADIL  + R   V LGGPY P   GRRD + S A  +E+ +P  +  ++ +LE F + G++   LV L  +H++G+  C
Sbjct:   51 LSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLDYEG---TERRSPASKTLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHSYARDVEK-VPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKASC 220          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.167e-27
Identity = 68/178 (38.20%), Postives = 99/178 (55.62%), Query Frame = 3
Query:  129 PGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLL--DSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            P L  ++Y+ TCP    I++E V     +   TA   LR  FHDC ++ CDAS+L+  +S  K   + +++ S     F  +  IK A+E  CPGVVSCADIL  + RD V  +GGP+  +K GR+DG +S+A  ++  LP    S+  +L  F   G     LVAL   H++G +HC
Sbjct:   24 PNLTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIATNSFNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHC 201          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.167e-27
Identity = 62/174 (35.63%), Postives = 99/174 (56.90%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L +++Y+  CP+AE+I++        R K  A   LR  FHDC V+ CD S+LL S +   +E++   +  ++ +  ++  K A+ER+CP ++SCAD+L L  RD V  +GGP+ P+  GRRDGR S+       LP     +  + + FA  G++A  LV L   H++G + C
Sbjct:   26 LDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKND-AERDAVPNLTLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSC 198          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.396e-27
Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 3
Query:  147 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHCV 659
            FY  TC  A   I+  ++    R +  A S +R  FHDC V  CDAS++L +T    SE++   +F   R F  I+  K AVE  CPGVVSCADI+ ++ RD    +GGP   +K GRRD   +   I ++ LP+ + S++ + E F   G++   LVAL  +H++G+  C+
Sbjct:   25 FYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCL 196          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.396e-27
Identity = 63/176 (35.80%), Postives = 99/176 (56.25%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L  NFY  TCP+  DII++ +      +  TA + +R  FHDC    CDAS+L+ ST    +E++   +  +    F  I   K A+E  CP  VSC+DI+ ++ RD ++ +GGPY  +  GRRD R S++ +L   LP     +S ++++F + G     +VAL  +HS+G +HC
Sbjct:   21 LTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHC 196          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.436e-27
Identity = 63/171 (36.84%), Postives = 91/171 (53.22%), Query Frame = 3
Query:  147 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            FY  TCP A  I++  ++  ++       S +R  FHDC V  CDAS+LLD +    SEK     +   R F  ++NIK A+E  CPGVVSC+DIL L+    V   GGP   +  GRRD   +        +P   + +S +  +F+A+G++   LVAL  +H+ GR  C
Sbjct:    6 FYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARC 176          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.436e-27
Identity = 68/174 (39.08%), Postives = 96/174 (55.17%), Query Frame = 3
Query:  144 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG-RKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHCV 659
            +FY D+CP     ++  V+    + +  A S LR  FHDC V  CDAS+LLD TR  L EK     +  +R +  I+ IK  VER CPGVVSCADIL ++ RD V+ +GG    +K GRRD    S +      LP    ++  ++  F A G+    +VAL  +H++G+  CV
Sbjct:   33 DFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPRDMVALSGAHTIGQARCV 206          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.436e-27
Identity = 64/171 (37.43%), Postives = 91/171 (53.22%), Query Frame = 3
Query:  147 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            FY  TCP A  I++  ++   +       S +R  FHDC V  CDAS+LLD T    SEK    +    R F  ++NIK A+E  CPGVVSC+D+L L+    V   GGP   +  GRRD   +        +P   +S+S +  +F+A+G++   LVAL  +H+ GR  C
Sbjct:   36 FYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARC 206          
The following BLAST results are available for this feature:
BLAST of FC920654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER1_ZINEL6.844e-2839.20Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PERN_ARMRU8.938e-2840.12Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER7_ARATH1.167e-2739.08Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER41_ARATH1.167e-2738.20Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER1_ARATH1.167e-2735.63Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER4_ARATH3.396e-2737.79Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER31_ARATH3.396e-2735.80Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PERA2_ARMRU4.436e-2736.84Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER68_ARATH4.436e-2739.08Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER53_ARATH4.436e-2737.43Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32011C11EF RVDevelop1 Citrus clementina cDNA clone C32011C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920654 ID=FC920654; Name=FC920654; organism=Citrus clementina; type=EST; length=665bp
GGTTGGTCACCTTTCGTGAGTGAAGAGTAGAAGAGACAATGGGTACGAAA
GCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCTGAG
GTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATTTTT
ACAAGGATACATGCCCTCAGGCCGAGGACATTATCAAGGAACAAGTTAAG
CTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAACAT
TTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGGACT
CGACAAGAAAGACCTTGTCTGAGAAGGAAATGGACAGGAGCTTTGGTATG
AGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTG
CCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCGGTAGAGATG
GCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGA
GATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCA
CAAAGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTG
ACGCCCCTGGACTTGTTGCTCTGCTACGATCTCACAGTGTTGGCAGAACT
CATTGTGTGAAGCTG
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