FC920654

Overview
NameFC920654
Unique NameFC920654
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:20..684. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.882e-27
Identity = 69/175 (39.43%), Postives = 97/175 (55.43%), Query Frame = 3
Query:  132 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            G  + FY  TCP+AE I++  V+  ++     A   LR  FHDC V  CD S+L++ +    +E+    +  ++ F  IE+ K  +E  CPGVVSCADIL L+ RD VVA  G    + TGRRDGR SRA      LP   DS+ +   +F   G++   LVAL  +H++G   C
Sbjct:   31 GTRVGFYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGSD---AERTAIPNRNLKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGRVSRAADAGD-LPAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTAGC 201          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.882e-27
Identity = 67/171 (39.18%), Postives = 94/171 (54.97%), Query Frame = 3
Query:  147 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALL-RSHSVGRTHC 656
            FY  +CP+AE I+   V   ++  K+   ++LR  FHDC V+ CDASLL+D      SEK    +  +R +  I+  K  +E  CP  VSCADI+ L+ RD V   GGP   + TGRRDG +S     +  LP     +S  ++ FAA G++   +V L+   HSVG  HC
Sbjct:   26 FYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNPN--DVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHC 194          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.291e-26
Identity = 62/174 (35.63%), Postives = 94/174 (54.02%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L  NFY  +C  AE +++  V+             LR  FHDC VQ CDAS+L+       +EK    +  +  F  I+  K A+E  CP  VSCADI+ L+ RD V A GGP + + TGRRDG++S A  +   + D   ++  +++ F++ G+    LV L  +H++G +HC
Sbjct:   29 LSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNS---TEKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHC 199          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.291e-26
Identity = 70/180 (38.89%), Postives = 101/180 (56.11%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM--DRSFGMRNFRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHCVK 662
            L  NFY+ +CP  E I++  V+  +++   TA + LR  FHDC V+ CDAS+LL S     SEK+   D+S     F  +   K+A++R+  C   VSCADIL L+ RD VV  GGP  P++ GRRDGR S    ++  LP     +  +   FA  G+    ++AL  +H++G  HC K
Sbjct:   25 LQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASP----SEKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGK 200          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.202e-26
Identity = 61/176 (34.66%), Postives = 100/176 (56.82%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L ++FY  +CP+  DII+E +         TA + LR  FHDC    CDAS+L+ ST    +E++   +  +    F  +   K A+E  CP  VSC+DI+ ++ RD +V +GGPY  +  GRRD R S++ ++   LP     +S ++++F++ G     +VAL  +H++G +HC
Sbjct:   32 LTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHC 207          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.755e-26
Identity = 62/172 (36.05%), Postives = 89/172 (51.74%), Query Frame = 3
Query:  147 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHCV 659
            FY  TCP A  I++  ++   +       S +R  FHDC V  CD SLLLD T    SEK    +    R F  +++IK A+E  CPG+VSC+DIL L+    V   GGP   +  GRRDG  +        LP   + ++ +  +F A+G+    +V+L  +H+ GR  CV
Sbjct:   37 FYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCV 208          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.755e-26
Identity = 62/173 (35.84%), Postives = 95/173 (54.91%), Query Frame = 3
Query:  144 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGID-APGLVALLRSHSVGRTHC 656
            +FY  TCPQ  DI+   +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K A+E+ CP  VSCAD+L ++ ++ +V  GGP   +  GRRD  +   ++    LP    ++  + +RF  +G+D +  LVAL   H+ G++ C
Sbjct:   27 SFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQC 199          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.755e-26
Identity = 65/185 (35.14%), Postives = 95/185 (51.35%), Query Frame = 3
Query:  117 NEEDPGLVMN----FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            N    GL  N    FY  +CP+ + I+K  V   +K     A S LR  FHDC V  CD S+LL+ +     EK    +   +R F  IE+IK  +E  CP  VSCADI+ L+ R+ VV  GGP+ P+  GRRD   +  +     LP   +++  +  +F  +G+D   +V L  +H++G   C
Sbjct:   38 NGHGHGLTSNLNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQC 222          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 4.905e-26
Identity = 70/175 (40.00%), Postives = 88/175 (50.29%), Query Frame = 3
Query:  135 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHC 656
            L  NFY   CP A   IK  V     +      S LR  FHDC VQ CDAS+LLD T     EK     +  +R F  I+ IK  VE  CPGVVSCADIL ++ RD VVALGG    +  GRRD   +        LP    ++S ++  F+  G     LV L  +H++G+  C
Sbjct:   24 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQC 198          
BLAST of FC920654 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 8.366e-26
Identity = 66/171 (38.60%), Postives = 96/171 (56.14%), Query Frame = 3
Query:  147 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHKDSMSVVLERFAAIGIDAPGLVALLRSHSVGRTHCV 659
            +Y  +CP+AE I++  V+  +      +   LR  FHDC VQ CD S+L+       +E+    + G+R    I++ K  +E  CPGVVSCADIL L+ RD V    GP   + TGR+DGR S A      LP   DS++V  ++F   G+D   LV LL +H++G+T C+
Sbjct:   33 YYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKS---AEQAALPNLGLRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEASN-LPSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQTDCL 199          
The following BLAST results are available for this feature:
BLAST of FC920654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PERN1_TOBAC9.882e-2739.43Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER44_ARATH9.882e-2739.18Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER46_ARATH1.291e-2635.63Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER16_ARATH1.291e-2638.89Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER63_ARATH2.202e-2634.66Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER54_ARATH3.755e-2636.05Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER38_ARATH3.755e-2635.84Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER10_ARATH3.755e-2635.14Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER1_ARAHY4.905e-2640.00Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER25_ARATH8.366e-2638.60Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32011C11EF RVDevelop1 Citrus clementina cDNA clone C32011C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920654 ID=FC920654; Name=FC920654; organism=Citrus clementina; type=EST; length=665bp
GGTTGGTCACCTTTCGTGAGTGAAGAGTAGAAGAGACAATGGGTACGAAA
GCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCTGAG
GTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATTTTT
ACAAGGATACATGCCCTCAGGCCGAGGACATTATCAAGGAACAAGTTAAG
CTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAACAT
TTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGGACT
CGACAAGAAAGACCTTGTCTGAGAAGGAAATGGACAGGAGCTTTGGTATG
AGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTG
CCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCGGTAGAGATG
GCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGA
GATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCA
CAAAGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTG
ACGCCCCTGGACTTGTTGCTCTGCTACGATCTCACAGTGTTGGCAGAACT
CATTGTGTGAAGCTG
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