FC920658

Overview
NameFC920658
Unique NameFC920658
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_HALHL (Adenosylhomocysteinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 9.087e-30
Identity = 62/113 (54.87%), Postives = 74/113 (65.49%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EI++AE EMPGLM  R EF   +P KGA+I G LHMTIQTAVLIETL  LG EVRW SCNIFSTQD               WKGET +EYWWC E+ ++   G  P+++
Sbjct:   16 WGRKEIKIAESEMPGLMETRREFAAQKPLKGARIAGCLHMTIQTAVLIETLQELGAEVRWSSCNIFSTQDQAAAAVAANGTPVFAWKGETEEEYWWCIEQTINGPDGWKPNML 128          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_PROM4 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9211) GN=ahcY PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.187e-29
Identity = 64/113 (56.64%), Postives = 75/113 (66.37%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  E+ +AE EMPGLMA R ++   +P KGA+I GSLHMTIQTAVLIETL ALG +VRW SCNIFSTQDH               KGETL EYW  T + L+WG    P++I
Sbjct:   27 FGRKELAIAEKEMPGLMALREKYHKEKPLKGARIAGSLHMTIQTAVLIETLVALGAQVRWASCNIFSTQDHAAAAIASSGIPVFAKKGETLDEYWAYTHRILEWGDQETPNMI 139          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFM (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M12) GN=ahcY PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.550e-29
Identity = 65/117 (55.56%), Postives = 78/117 (66.67%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLI 458
            +G  EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +G  VRW SCNIFSTQDH              WKGETL+EYW CT +AL +    G   GP+LI
Sbjct:   23 WGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLADGTLTGPELI 139          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_LEIDO (Adenosylhomocysteinase OS=Leishmania donovani PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.550e-29
Identity = 68/124 (54.84%), Postives = 82/124 (66.13%), Query Frame = 3
Query:   90 RMKDLCTRLTFGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGG-PDLI 458
            ++KD+ +   +G   IELAE EMPGLM  R E+GPSQP KGAKI G LHMT+QTAVLIETL ALG +VRW SCNIFSTQD+              WKGET +EY WC  + +    G G P++I
Sbjct:    5 KVKDI-SLAEWGRKAIELAENEMPGLMELRREYGPSQPLKGAKIAGCLHMTVQTAVLIETLKALGADVRWSSCNIFSTQDNAAAAIAKAGVPVFAWKGETDEEYEWCIAQTVKGFSGDGLPNMI 127          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_GRABC (Adenosylhomocysteinase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.550e-29
Identity = 63/113 (55.75%), Postives = 75/113 (66.37%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EI +AE EMPGLMA R E+G S+P  GA+I G LHMTIQTAVLIETLTALG  VRW SCNIFSTQDH              WKG + +E+WWC E+ +    G  P++I
Sbjct:   24 WGRKEIRMAEDEMPGLMALREEYGNSKPLAGARIAGCLHMTIQTAVLIETLTALGATVRWSSCNIFSTQDHAAAGIAAAGIPVFAWKGLSEEEFWWCIEQTVRGPDGWTPNMI 136          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_YEAST (Adenosylhomocysteinase OS=Saccharomyces cerevisiae GN=SAH1 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.024e-29
Identity = 64/102 (62.75%), Postives = 69/102 (67.65%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKAL 425
            FG  EIELAE EMPGLMA R  +G  QP KGA+I G LHMTIQTAVLIETL ALG EV W SCNI+STQDH              WKGET +EY WC E+ L
Sbjct:   18 FGRKEIELAEHEMPGLMAIRKAYGDVQPLKGARIAGCLHMTIQTAVLIETLVALGAEVTWSSCNIYSTQDHAAAAIAASGVPVFAWKGETEEEYLWCIEQQL 119          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_MARMM (Adenosylhomocysteinase OS=Maricaulis maris (strain MCS10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.024e-29
Identity = 63/113 (55.75%), Postives = 75/113 (66.37%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  E ++AE+EMPGLMA R E+  SQP KGA+I GSLHMT+QTA+LIETLTALG EVRW SCNIFSTQDH               KGETL+EYW   +    W  G   ++I
Sbjct:   20 WGRIEFDMAEIEMPGLMALREEYKDSQPLKGARIAGSLHMTVQTAILIETLTALGAEVRWASCNIFSTQDHAAAAIAETGVPVFATKGETLEEYWDYADAIFHWPDGETANMI 132          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_DROME (Adenosylhomocysteinase OS=Drosophila melanogaster GN=Ahcy13 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 2.644e-29
Identity = 63/110 (57.27%), Postives = 76/110 (69.09%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            +G   I +AE EMPGLMACR ++GPS+P KGA+ITG LHMT+QTAVLIETL  LG +V+W SCNIFSTQD+              WKGET +EY WC E+ L + P G P
Sbjct:   16 WGRKAIIIAENEMPGLMACRKKYGPSKPLKGARITGCLHMTVQTAVLIETLVELGAQVQWSSCNIFSTQDNAAAAIAATGVPVYAWKGETDEEYMWCIEQTLVF-PDGQP 124          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_CHRVO (Adenosylhomocysteinase OS=Chromobacterium violaceum GN=ahcY PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.644e-29
Identity = 62/113 (54.87%), Postives = 76/113 (67.26%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  E+ +AE EMPGLMA R E+  +QP +GA+I GSLHMT+QTAVLIETLTALG EVRW SCNIFSTQDH              +KGE+L EYW  + K  +W  G   ++I
Sbjct:   17 WGRKELNIAETEMPGLMATRDEYHAAQPLRGARIAGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAFKGESLDEYWEFSHKIFEWPEGQPANMI 129          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BARHE (Adenosylhomocysteinase OS=Bartonella henselae GN=ahcY PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.644e-29
Identity = 63/113 (55.75%), Postives = 74/113 (65.49%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  E+++AE EMPGLMACR EF  SQP +GA+I+GSLHMTIQTAVLIETL A+G  VRW S NIFSTQDH               KGETL+EYW   +    W  G   +LI
Sbjct:   16 YGRKELDIAETEMPGLMACREEFSSSQPLRGARISGSLHMTIQTAVLIETLKAIGANVRWSSSNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYIDAIFQWPDGNPSNLI 128          
The following BLAST results are available for this feature:
BLAST of FC920658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
SAHH_HALHL9.087e-3054.87Adenosylhomocysteinase OS=Halorhodospira halophila... [more]
SAHH_PROM41.187e-2956.64Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_XYLFM1.550e-2955.56Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_LEIDO1.550e-2954.84Adenosylhomocysteinase OS=Leishmania donovani PE=3... [more]
SAHH_GRABC1.550e-2955.75Adenosylhomocysteinase OS=Granulibacter bethesdens... [more]
SAHH_YEAST2.024e-2962.75Adenosylhomocysteinase OS=Saccharomyces cerevisiae... [more]
SAHH_MARMM2.024e-2955.75Adenosylhomocysteinase OS=Maricaulis maris (strain... [more]
SAHH_DROME2.644e-2957.27Adenosylhomocysteinase OS=Drosophila melanogaster ... [more]
SAHH_CHRVO2.644e-2954.87Adenosylhomocysteinase OS=Chromobacterium violaceu... [more]
SAHH_BARHE2.644e-2955.75Adenosylhomocysteinase OS=Bartonella henselae GN=a... [more]

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Properties
Property NameValue
Genbank descriptionC32011D03EF RVDevelop1 Citrus clementina cDNA clone C32011D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920658 ID=FC920658; Name=FC920658; organism=Citrus clementina; type=EST; length=459bp
TCTCTTCCTTCTTTCTTATAGATGCATCAATACTATTAATCAACCATGGC
GTTTGCATTCGAGAAATCCGCTAGGCGGACTTGAATTCAAGGATGAAGGA
TCTGTGCACCAGGCTGACTTTCGGGCCACACGAAATCGAGTTGGCCGAAG
TCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAG
CCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGAC
AGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGACGAAGTCCGCTGGT
GCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCA
CGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTA
CTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAG
ATCTCATCG
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