FC920658

Overview
NameFC920658
Unique NameFC920658
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_PROMA (Adenosylhomocysteinase OS=Prochlorococcus marinus GN=ahcY PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 3.453e-29
Identity = 63/117 (53.85%), Postives = 75/117 (64.10%), Query Frame = 3
Query:  108 TRLTFGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            T   FG  E+ +AE EMPGLM+ R ++G  +P +GA+I GSLHMTIQT VLIETL ALG +VRW SCNIFSTQDH               KGETL EYW  T   L+W    GP++I
Sbjct:   23 TLADFGRKELAIAEKEMPGLMSLRDKYGQEKPLQGARIAGSLHMTIQTGVLIETLVALGAQVRWASCNIFSTQDHAAAAIAKAGVPVFAKKGETLSEYWSFTHSILEWSGEQGPNMI 139          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_PROM9 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ahcY PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 3.453e-29
Identity = 66/113 (58.41%), Postives = 74/113 (65.49%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  EI++AE EMPGLMA R ++   +P KGAKI GSLHMTIQTAVLIETL  LG EV+W SCNIFSTQDH               KGETL EYW  T   LDWG    P++I
Sbjct:   24 FGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGSLHMTIQTAVLIETLVDLGAEVKWASCNIFSTQDHAAAAIADQGISVYAKKGETLDEYWQYTHCILDWG-ADSPNMI 135          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_PROM0 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 3.453e-29
Identity = 64/105 (60.95%), Postives = 70/105 (66.67%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWG 434
            FG  EI++AE EMPGLMA R ++   +P KGAKI GSLHMTIQTAVLIETL  LG EV+W SCNIFSTQDH               KGETL EYW  T   LDWG
Sbjct:   24 FGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGSLHMTIQTAVLIETLVDLGAEVKWASCNIFSTQDHAAAAIADQGISVFAKKGETLDEYWQYTHYILDWG 128          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_ANOGA (Adenosylhomocysteinase OS=Anopheles gambiae GN=Ahcy13 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 4.510e-29
Identity = 65/110 (59.09%), Postives = 73/110 (66.36%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            FG  EI LAE EMPGLMACR ++GP +  KGA+I G LHMTIQTAVLIETL  LG EV+W SCNIFSTQDH              WKGET +EY WC  + L + P G P
Sbjct:   16 FGRKEIVLAENEMPGLMACRQKYGPLKILKGARIAGCLHMTIQTAVLIETLIELGAEVQWSSCNIFSTQDHAAAAMAKAGVPVYAWKGETDEEYMWCIRQTLIF-PDGKP 124          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_RHOBA (Adenosylhomocysteinase OS=Rhodopirellula baltica GN=ahcY PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 5.890e-29
Identity = 64/117 (54.70%), Postives = 78/117 (66.67%), Query Frame = 3
Query:   90 RMKDLCTRLTFGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPG 440
            ++KD+ +   +G  EIELAE EMPGLMA R+++G  +P KGA+I G LHMTIQTAVLIETL  LG EV W SCNIFSTQDH              WKG T +E+ WC E+ LD+  G
Sbjct:   12 KVKDI-SLADYGRKEIELAENEMPGLMALRSKYGAEKPLKGARIAGCLHMTIQTAVLIETLVELGAEVTWSSCNIFSTQDHAAAAIAAAGIPVYAWKGMTEEEFDWCIEQTLDFPSG 127          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_PROM2 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ahcY PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 5.890e-29
Identity = 65/113 (57.52%), Postives = 74/113 (65.49%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  EI++AE EMPGLMA R ++   +P KGAKI GSLHMTIQTAVLIETL  LG +V+W SCNIFSTQDH               KGETL EYW  T   LDWG    P++I
Sbjct:   24 FGRKEIKIAETEMPGLMALRDKYQSEKPLKGAKIAGSLHMTIQTAVLIETLVDLGAQVKWASCNIFSTQDHAAAAIADRGIPVFAKKGETLDEYWQYTHYILDWG-SDSPNMI 135          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BART1 (Adenosylhomocysteinase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=ahcY PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 5.890e-29
Identity = 62/110 (56.36%), Postives = 74/110 (67.27%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            +G  E+++AE EMPGLMACR EF  SQP +GA+I+GSLHMTIQTAVLIETL A+G ++RW S NIFSTQDH               KGETL+EYW   +    W P G P
Sbjct:   16 YGRKELDIAETEMPGLMACRKEFSSSQPLRGARISGSLHMTIQTAVLIETLKAIGADIRWSSSNIFSTQDHAAAAIAATGIPVFAVKGETLEEYWTYIDAIFQW-PDGHP 124          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_DICDI (Adenosylhomocysteinase OS=Dictyostelium discoideum GN=sahA PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 7.693e-29
Identity = 64/120 (53.33%), Postives = 81/120 (67.50%), Query Frame = 3
Query:   81 LNSRMKDLCTRLTFGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPG 440
            L+ ++KD+ +   +G  EIE+AE EMPGLM  R ++GP+Q  KGA+I G LHMTIQTAVLIETLTALG +V+W SCNIFSTQD               WKGET +EY WC E+ + +  G
Sbjct:    4 LHYKVKDI-SLAAWGRKEIEIAENEMPGLMTLRKKYGPAQILKGARIAGCLHMTIQTAVLIETLTALGAQVQWSSCNIFSTQDQAAAAIAATGVPVYAWKGETEEEYNWCVEQTIVFQDG 122          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_DELAS (Adenosylhomocysteinase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 7.693e-29
Identity = 66/117 (56.41%), Postives = 77/117 (65.81%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGG----GPDLI 458
            +G  EI +AE EMPGLMA R EF  +QP KGA+I GSLHMTIQTAVLIETL ALG EVRW SCNIFSTQDH               KGE+L +YW  T +  ++G  G    GP++I
Sbjct:   22 WGRKEILIAETEMPGLMATREEFAAAQPLKGARIAGSLHMTIQTAVLIETLKALGAEVRWASCNIFSTQDHAAAAIAETGTPVFAIKGESLADYWDYTHRIFEFGAAGTEGEGPNMI 138          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_COXBU (Adenosylhomocysteinase OS=Coxiella burnetii GN=ahcY PE=3 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 7.693e-29
Identity = 62/113 (54.87%), Postives = 74/113 (65.49%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EIE+AE EMPGLMA R ++  ++P KGA+I G +HMTIQTAVLIETL  LG EVRW SCNIFSTQDH              WKGET +EYW C    L+   G  P+L+
Sbjct:   24 WGRKEIEIAETEMPGLMALRKKYKNAKPLKGARIAGCIHMTIQTAVLIETLMLLGAEVRWSSCNIFSTQDHAAAALAQKGIPIFAWKGETEEEYWRCIASTLEGPKGWTPNLL 136          
The following BLAST results are available for this feature:
BLAST of FC920658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
SAHH_PROMA3.453e-2953.85Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PROM93.453e-2958.41Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PROM03.453e-2960.95Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_ANOGA4.510e-2959.09Adenosylhomocysteinase OS=Anopheles gambiae GN=Ahc... [more]
SAHH_RHOBA5.890e-2954.70Adenosylhomocysteinase OS=Rhodopirellula baltica G... [more]
SAHH_PROM25.890e-2957.52Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_BART15.890e-2956.36Adenosylhomocysteinase OS=Bartonella tribocorum (s... [more]
SAHH_DICDI7.693e-2953.33Adenosylhomocysteinase OS=Dictyostelium discoideum... [more]
SAHH_DELAS7.693e-2956.41Adenosylhomocysteinase OS=Delftia acidovorans (str... [more]
SAHH_COXBU7.693e-2954.87Adenosylhomocysteinase OS=Coxiella burnetii GN=ahc... [more]

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Properties
Property NameValue
Genbank descriptionC32011D03EF RVDevelop1 Citrus clementina cDNA clone C32011D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920658 ID=FC920658; Name=FC920658; organism=Citrus clementina; type=EST; length=459bp
TCTCTTCCTTCTTTCTTATAGATGCATCAATACTATTAATCAACCATGGC
GTTTGCATTCGAGAAATCCGCTAGGCGGACTTGAATTCAAGGATGAAGGA
TCTGTGCACCAGGCTGACTTTCGGGCCACACGAAATCGAGTTGGCCGAAG
TCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAG
CCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGAC
AGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGACGAAGTCCGCTGGT
GCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCA
CGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTA
CTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAG
ATCTCATCG
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