FC920658

Overview
NameFC920658
Unique NameFC920658
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_COXBN (Adenosylhomocysteinase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=ahcY PE=3 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 7.693e-29
Identity = 62/113 (54.87%), Postives = 74/113 (65.49%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EIE+AE EMPGLMA R ++  ++P KGA+I G +HMTIQTAVLIETL  LG EVRW SCNIFSTQDH              WKGET +EYW C    L+   G  P+L+
Sbjct:   24 WGRKEIEIAETEMPGLMALRKKYKNAKPLKGARIAGCIHMTIQTAVLIETLMLLGAEVRWSSCNIFSTQDHAAAALAQKGIPIFAWKGETEEEYWRCIASTLEGPKGWTPNLL 136          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_COXB2 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuG_Q212) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 7.693e-29
Identity = 62/113 (54.87%), Postives = 74/113 (65.49%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EIE+AE EMPGLMA R ++  ++P KGA+I G +HMTIQTAVLIETL  LG EVRW SCNIFSTQDH              WKGET +EYW C    L+   G  P+L+
Sbjct:   24 WGRKEIEIAETEMPGLMALRKKYKNAKPLKGARIAGCIHMTIQTAVLIETLMLLGAEVRWSSCNIFSTQDHAAAALAQKGIPIFAWKGETEEEYWRCIASTLEGPKGWTPNLL 136          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_COXB1 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 7.693e-29
Identity = 62/113 (54.87%), Postives = 74/113 (65.49%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EIE+AE EMPGLMA R ++  ++P KGA+I G +HMTIQTAVLIETL  LG EVRW SCNIFSTQDH              WKGET +EYW C    L+   G  P+L+
Sbjct:   24 WGRKEIEIAETEMPGLMALRKKYKNAKPLKGARIAGCIHMTIQTAVLIETLMLLGAEVRWSSCNIFSTQDHAAAALAQKGIPIFAWKGETEEEYWRCIASTLEGPKGWTPNLL 136          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BARQU (Adenosylhomocysteinase OS=Bartonella quintana GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 7.693e-29
Identity = 63/113 (55.75%), Postives = 75/113 (66.37%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EI++AE EMPGLMACR EF  SQP +GA+I+GSLH+TIQTAVLIETL A+G +VRW S NIFSTQDH               KGETL+EYW   +    W  G   +LI
Sbjct:   16 YGRKEIDIAETEMPGLMACREEFSFSQPLRGARISGSLHITIQTAVLIETLKAIGADVRWSSSNIFSTQDHAAAAIAATGTAVFGVKGETLEEYWAYIDAIFQWPDGNPSNLI 128          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_GRAFK (Adenosylhomocysteinase OS=Gramella forsetii (strain KT0803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.005e-28
Identity = 63/110 (57.27%), Postives = 71/110 (64.55%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            +G  EIELAE EMPGLMA R E+G S+P KGA+I G LHMTIQTAVLIETL  LG  V W SCNIFSTQDH              WKG T +E+ WC E+ L +G    P
Sbjct:   21 YGRREIELAEAEMPGLMALRKEYGASKPLKGARIAGCLHMTIQTAVLIETLVELGANVTWSSCNIFSTQDHAAAAIAAAGIPVYAWKGLTEEEFNWCIEQTLFFGEDRKP 130          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_JANMA (Adenosylhomocysteinase OS=Janthinobacterium sp. (strain Marseille) GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.714e-28
Identity = 60/104 (57.69%), Postives = 71/104 (68.27%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW 431
            +G  EI +AE EMPGLMA R EF  +QP KGA+ITGS+HMTIQTAVLI+TL ALG +VRW SCNI+STQDH               KGETL +YW  T +  +W
Sbjct:   25 WGDKEIRIAETEMPGLMAIREEFAAAQPLKGARITGSIHMTIQTAVLIQTLEALGAKVRWASCNIYSTQDHAAAAIAAAGTPVFAVKGETLDDYWEYTHRIFEW 128          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_HERAR (Adenosylhomocysteinase OS=Herminiimonas arsenicoxydans GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.714e-28
Identity = 60/104 (57.69%), Postives = 71/104 (68.27%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW 431
            +G  EI +AE EMPGLMA R EF  +QP KGA+ITGS+HMTIQTAVLI+TL ALG +VRW SCNI+STQDH               KGETL +YW  T +  +W
Sbjct:   25 WGDKEIRIAETEMPGLMAIREEFAAAQPLKGARITGSIHMTIQTAVLIQTLEALGAKVRWASCNIYSTQDHAAAAIAAAGTPVFAVKGETLDDYWEYTHRIFEW 128          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_CORDI (Adenosylhomocysteinase OS=Corynebacterium diphtheriae GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.714e-28
Identity = 62/113 (54.87%), Postives = 70/113 (61.95%), Query Frame = 3
Query:  123 GPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWG 434
            G H+I LAE EMPGLM  R E+   QP  GA+ITGS+HMT+QTAVLIETL ALG +VRW SCNIFSTQD                        WKGETL+EYW C +K   WG
Sbjct:   17 GRHQIRLAEYEMPGLMQLREEYQQEQPLAGARITGSIHMTVQTAVLIETLVALGAQVRWASCNIFSTQDEAAAAVVVGPHGTPEDPQGVPVFAWKGETLEEYWDCVDKIFSWG 129          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BDEBA (Adenosylhomocysteinase OS=Bdellovibrio bacteriovorus GN=ahcY PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 2.238e-28
Identity = 62/109 (56.88%), Postives = 71/109 (65.14%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKAL-DWGPGG 443
            +G  EI++AE EMPGLMA R E+   QP KGA+I G LHMTIQTAVLIETL  LG E+RW SCNIFSTQDH              WKG T QE+ WC E+ +  WG  G
Sbjct:   43 WGREEIKIAETEMPGLMALRKEYKKQQPLKGARIAGCLHMTIQTAVLIETLVELGAEIRWSSCNIFSTQDHAAAAIAAAGIPVFAWKGLTEQEFNWCIEQTIVGWGKEG 151          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_TRIVA (Adenosylhomocysteinase OS=Trichomonas vaginalis PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 6.512e-28
Identity = 69/141 (48.94%), Postives = 80/141 (56.74%), Query Frame = 3
Query:   63 EIR*ADLNSRMKDLCTRLTFGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQD---------HXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            E R AD+N  +         G  E+ LAE EMPGLM  R  +  S+P KG +I+GSLHMT+QTAVLIETLTALG +VRW SCNIFSTQD                        WKGETL EYW  T +AL W  G GP  +
Sbjct:   12 EYRIADINLHV--------LGRKELTLAEKEMPGLMVLRERYSASKPLKGVRISGSLHMTVQTAVLIETLTALGADVRWASCNIFSTQDTAAAAIVVGPTGTPEKPAGIPVFAWKGETLPEYWENTYRALTWPDGQGPQQV 144          
The following BLAST results are available for this feature:
BLAST of FC920658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
SAHH_COXBN7.693e-2954.87Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_COXB27.693e-2954.87Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_COXB17.693e-2954.87Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_BARQU7.693e-2955.75Adenosylhomocysteinase OS=Bartonella quintana GN=a... [more]
SAHH_GRAFK1.005e-2857.27Adenosylhomocysteinase OS=Gramella forsetii (strai... [more]
SAHH_JANMA1.714e-2857.69Adenosylhomocysteinase OS=Janthinobacterium sp. (s... [more]
SAHH_HERAR1.714e-2857.69Adenosylhomocysteinase OS=Herminiimonas arsenicoxy... [more]
SAHH_CORDI1.714e-2854.87Adenosylhomocysteinase OS=Corynebacterium diphther... [more]
SAHH_BDEBA2.238e-2856.88Adenosylhomocysteinase OS=Bdellovibrio bacteriovor... [more]
SAHH_TRIVA6.512e-2848.94Adenosylhomocysteinase OS=Trichomonas vaginalis PE... [more]

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Properties
Property NameValue
Genbank descriptionC32011D03EF RVDevelop1 Citrus clementina cDNA clone C32011D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920658 ID=FC920658; Name=FC920658; organism=Citrus clementina; type=EST; length=459bp
TCTCTTCCTTCTTTCTTATAGATGCATCAATACTATTAATCAACCATGGC
GTTTGCATTCGAGAAATCCGCTAGGCGGACTTGAATTCAAGGATGAAGGA
TCTGTGCACCAGGCTGACTTTCGGGCCACACGAAATCGAGTTGGCCGAAG
TCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAG
CCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGAC
AGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGACGAAGTCCGCTGGT
GCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCA
CGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTA
CTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAG
ATCTCATCG
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