FC920658

Overview
NameFC920658
Unique NameFC920658
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_XANOM (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.232e-27
Identity = 62/117 (52.99%), Postives = 75/117 (64.10%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLI 458
            +G  E+++AE EMPGLM+ R +   + P K  +ITGSLHMTIQTAVLIETL  +G  VRW SCNIFSTQDH              WKGETL+EYW CT  AL +    G   GP+L+
Sbjct:   23 WGRKELDIAEHEMPGLMSIRRKHAQTTPLKDVRITGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELV 139          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BURXL (Adenosylhomocysteinase OS=Burkholderia xenovorans (strain LB400) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.232e-27
Identity = 59/113 (52.21%), Postives = 73/113 (64.60%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  E+ +AE EMPGL+  R E+   QP KGA+I GSLHMTIQT VLIETLTALG +VRW SCNIFSTQDH              +KGE+L EYW  + +  +W  G   ++I
Sbjct:   24 WGRKELNIAETEMPGLVQTREEYKVQQPLKGARIAGSLHMTIQTGVLIETLTALGADVRWASCNIFSTQDHAAAAIAKAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMI 136          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHHB_XENLA (Adenosylhomocysteinase B OS=Xenopus laevis GN=ahcy-B PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.232e-27
Identity = 59/107 (55.14%), Postives = 71/107 (66.36%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPG 440
            +G   IE+AE EMPGLM  R  +  S+P KGA+I G LHMT+QTAVLIETLTA+G EV+W SCNIFSTQDH              WKGET +EY WC E+ + +  G
Sbjct:   17 WGRKAIEIAENEMPGLMKMREMYSESKPLKGARIAGCLHMTLQTAVLIETLTAIGAEVQWSSCNIFSTQDHAAAAIAKTGVPVYAWKGETDEEYIWCIEQTIYFKDG 123          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_RAT (Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 4.221e-27
Identity = 58/107 (54.21%), Postives = 70/107 (65.42%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPG 440
            +G   +++AE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALG EVRW SCNIFSTQDH              WKGET +EY WC E+ L +  G
Sbjct:   17 WGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHFKDG 123          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_PIG (Adenosylhomocysteinase OS=Sus scrofa GN=AHCY PE=3 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 4.221e-27
Identity = 59/107 (55.14%), Postives = 70/107 (65.42%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPG 440
            +G   ++LAE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALG EVRW SCNIFSTQDH              WKGET +EY WC E+ L +  G
Sbjct:   17 WGRKALDLAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDG 123          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_NITEC (Adenosylhomocysteinase OS=Nitrosomonas eutropha (strain C91) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.221e-27
Identity = 59/108 (54.63%), Postives = 70/108 (64.81%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGG 443
            +G  EI +AE EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL ALG EVRW SCNIFSTQDH              +KGE+L+EYW    +  +W   G
Sbjct:   27 WGRKEIAIAETEMPGLMALREQYAGKKPLAGARIAGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAARDIPVFAYKGESLKEYWDYAHQIFEWTSDG 134          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_MOUSE (Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 4.221e-27
Identity = 58/107 (54.21%), Postives = 70/107 (65.42%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPG 440
            +G   +++AE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALG EVRW SCNIFSTQDH              WKGET +EY WC E+ L +  G
Sbjct:   17 WGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHFKDG 123          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_FLAJ1 (Adenosylhomocysteinase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=ahcY PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 5.513e-27
Identity = 63/115 (54.78%), Postives = 74/115 (64.35%), Query Frame = 3
Query:   90 RMKDLCTRLTFGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWG 434
            ++KD+ +   +G  EIELAE EMPGLMA RAE+   QP KGA+I G LHMTIQTAVLIETL ALG EV W SCNIFSTQD               WKG   + + WC E+ L +G
Sbjct:   12 KVKDI-SLAAWGRKEIELAEAEMPGLMALRAEYKDEQPLKGARIAGCLHMTIQTAVLIETLIALGAEVTWSSCNIFSTQDQAAAAIAAAGISVYAWKGLDEESFDWCIEQTLFFG 125          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BOVIN (Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 SV=3)

HSP 1 Score: 119.783 bits (299), Expect = 5.513e-27
Identity = 59/107 (55.14%), Postives = 70/107 (65.42%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPG 440
            +G   ++LAE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALG EVRW SCNIFSTQDH              WKGET +EY WC E+ L +  G
Sbjct:   17 WGRKALDLAENEMPGLMHMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDG 123          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHHA_XENLA (Adenosylhomocysteinase A OS=Xenopus laevis GN=ahcy-A PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 5.513e-27
Identity = 60/107 (56.07%), Postives = 70/107 (65.42%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPG 440
            +G   IE+AE EMPGLM  R     S+P KGA+I G LHMT+QTAVLIETLTALG EV+W SCNIFSTQDH              WKGET +EY WC E+ + +  G
Sbjct:   17 WGRKAIEIAENEMPGLMKMREMHSESKPLKGARIAGCLHMTLQTAVLIETLTALGAEVQWSSCNIFSTQDHAAAAIAKTGVPVYAWKGETDEEYIWCIEQTIYFKDG 123          
The following BLAST results are available for this feature:
BLAST of FC920658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
SAHH_XANOM3.232e-2752.99Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_BURXL3.232e-2752.21Adenosylhomocysteinase OS=Burkholderia xenovorans ... [more]
SAHHB_XENLA3.232e-2755.14Adenosylhomocysteinase B OS=Xenopus laevis GN=ahcy... [more]
SAHH_RAT4.221e-2754.21Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahc... [more]
SAHH_PIG4.221e-2755.14Adenosylhomocysteinase OS=Sus scrofa GN=AHCY PE=3 ... [more]
SAHH_NITEC4.221e-2754.63Adenosylhomocysteinase OS=Nitrosomonas eutropha (s... [more]
SAHH_MOUSE4.221e-2754.21Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=... [more]
SAHH_FLAJ15.513e-2754.78Adenosylhomocysteinase OS=Flavobacterium johnsonia... [more]
SAHH_BOVIN5.513e-2755.14Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 ... [more]
SAHHA_XENLA5.513e-2756.07Adenosylhomocysteinase A OS=Xenopus laevis GN=ahcy... [more]

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Properties
Property NameValue
Genbank descriptionC32011D03EF RVDevelop1 Citrus clementina cDNA clone C32011D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920658 ID=FC920658; Name=FC920658; organism=Citrus clementina; type=EST; length=459bp
TCTCTTCCTTCTTTCTTATAGATGCATCAATACTATTAATCAACCATGGC
GTTTGCATTCGAGAAATCCGCTAGGCGGACTTGAATTCAAGGATGAAGGA
TCTGTGCACCAGGCTGACTTTCGGGCCACACGAAATCGAGTTGGCCGAAG
TCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAG
CCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGAC
AGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGACGAAGTCCGCTGGT
GCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCA
CGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTA
CTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAG
ATCTCATCG
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