FC920658

Overview
NameFC920658
Unique NameFC920658
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_MACFA (Adenosylhomocysteinase OS=Macaca fascicularis GN=AHCY PE=2 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 7.200e-27
Identity = 57/107 (53.27%), Postives = 71/107 (66.36%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPG 440
            +G   +++AE EMPGLM  R ++  S+P KGA+I G LHMT++TAVLIETL ALG EV+W SCNIFSTQDH              WKGET +EY WC E+ L +  G
Sbjct:   17 WGRKALDIAENEMPGLMRMREQYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDG 123
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BURP8 (Adenosylhomocysteinase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=ahcY PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 9.403e-27
Identity = 57/113 (50.44%), Postives = 73/113 (64.60%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  E+++AE EMPGL+  R E+   QP KGA++ GSLHMTIQT VLIETL ALG +VRW SCNIFSTQDH              +KGE+L EYW  + +  +W  G   ++I
Sbjct:   24 WGRKELDIAETEMPGLVQIREEYKAQQPLKGARVAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIAKGGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMI 136
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_PSEMY (Adenosylhomocysteinase OS=Pseudomonas mendocina (strain ymp) GN=ahcY PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.228e-26
Identity = 58/102 (56.86%), Postives = 67/102 (65.69%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKAL 425
            +G  E+ +AE EMP LM  R ++  SQP KGAKI G +HMTIQT VLIETLTALG EVRW SCNIFSTQD               WKGET +EY WC E+ +
Sbjct:   23 WGRKELIIAESEMPALMGLRRKYAASQPLKGAKILGCIHMTIQTGVLIETLTALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTI 124
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BURTA (Adenosylhomocysteinase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.604e-26
Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  E+ +AE EMPGL+  R E+   QP KGA+I GSLHMTIQT VLIETL ALG +VRW SCNIFSTQDH              +KGE+L EYW  + +  +W  G   ++I
Sbjct:   24 WGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMI 136
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BURPS (Adenosylhomocysteinase OS=Burkholderia pseudomallei GN=ahcY PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.604e-26
Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  E+ +AE EMPGL+  R E+   QP KGA+I GSLHMTIQT VLIETL ALG +VRW SCNIFSTQDH              +KGE+L EYW  + +  +W  G   ++I
Sbjct:   24 WGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMI 136
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BURP6 (Adenosylhomocysteinase OS=Burkholderia pseudomallei (strain 668) GN=ahcY PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.604e-26
Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  E+ +AE EMPGL+  R E+   QP KGA+I GSLHMTIQT VLIETL ALG +VRW SCNIFSTQDH              +KGE+L EYW  + +  +W  G   ++I
Sbjct:   24 WGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMI 136
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BURP1 (Adenosylhomocysteinase OS=Burkholderia pseudomallei (strain 1710b) GN=ahcY PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.604e-26
Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  E+ +AE EMPGL+  R E+   QP KGA+I GSLHMTIQT VLIETL ALG +VRW SCNIFSTQDH              +KGE+L EYW  + +  +W  G   ++I
Sbjct:   24 WGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMI 136
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BURP0 (Adenosylhomocysteinase OS=Burkholderia pseudomallei (strain 1106a) GN=ahcY PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.604e-26
Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  E+ +AE EMPGL+  R E+   QP KGA+I GSLHMTIQT VLIETL ALG +VRW SCNIFSTQDH              +KGE+L EYW  + +  +W  G   ++I
Sbjct:   24 WGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMI 136
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BURMS (Adenosylhomocysteinase OS=Burkholderia mallei (strain SAVP1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.604e-26
Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  E+ +AE EMPGL+  R E+   QP KGA+I GSLHMTIQT VLIETL ALG +VRW SCNIFSTQDH              +KGE+L EYW  + +  +W  G   ++I
Sbjct:   24 WGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMI 136
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BURMA (Adenosylhomocysteinase OS=Burkholderia mallei GN=ahcY PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.604e-26
Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  E+ +AE EMPGL+  R E+   QP KGA+I GSLHMTIQT VLIETL ALG +VRW SCNIFSTQDH              +KGE+L EYW  + +  +W  G   ++I
Sbjct:   24 WGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMI 136
The following BLAST results are available for this feature:
BLAST of FC920658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
SAHH_MACFA7.200e-2753.27Adenosylhomocysteinase OS=Macaca fascicularis GN=A... [more]
SAHH_BURP89.403e-2750.44Adenosylhomocysteinase OS=Burkholderia phymatum (s... [more]
SAHH_PSEMY1.228e-2656.86Adenosylhomocysteinase OS=Pseudomonas mendocina (s... [more]
SAHH_BURTA1.604e-2651.33Adenosylhomocysteinase OS=Burkholderia thailandens... [more]
SAHH_BURPS1.604e-2651.33Adenosylhomocysteinase OS=Burkholderia pseudomalle... [more]
SAHH_BURP61.604e-2651.33Adenosylhomocysteinase OS=Burkholderia pseudomalle... [more]
SAHH_BURP11.604e-2651.33Adenosylhomocysteinase OS=Burkholderia pseudomalle... [more]
SAHH_BURP01.604e-2651.33Adenosylhomocysteinase OS=Burkholderia pseudomalle... [more]
SAHH_BURMS1.604e-2651.33Adenosylhomocysteinase OS=Burkholderia mallei (str... [more]
SAHH_BURMA1.604e-2651.33Adenosylhomocysteinase OS=Burkholderia mallei GN=a... [more]

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Properties
Property NameValue
Genbank descriptionC32011D03EF RVDevelop1 Citrus clementina cDNA clone C32011D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920658 ID=FC920658; Name=FC920658; organism=Citrus clementina; type=EST; length=459bp
TCTCTTCCTTCTTTCTTATAGATGCATCAATACTATTAATCAACCATGGC
GTTTGCATTCGAGAAATCCGCTAGGCGGACTTGAATTCAAGGATGAAGGA
TCTGTGCACCAGGCTGACTTTCGGGCCACACGAAATCGAGTTGGCCGAAG
TCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAG
CCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGAC
AGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGACGAAGTCCGCTGGT
GCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCA
CGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTA
CTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAG
ATCTCATCG
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