FC920658

Overview
NameFC920658
Unique NameFC920658
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_RHIEC (Adenosylhomocysteinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ahcY PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.355e-33
Identity = 69/113 (61.06%), Postives = 80/113 (70.80%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  EI +AE EMPGLM+CRAEFG ++P KGA+ITGSLHMTIQTAVLIETL ALG EVRW SCNIFSTQDH               KGE+L++YW  T+K   W  GG  ++I
Sbjct:   17 FGRKEITIAETEMPGLMSCRAEFGEAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMI 129          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_RHIE6 (Adenosylhomocysteinase OS=Rhizobium etli (strain CIAT 652) GN=ahcY PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.355e-33
Identity = 69/113 (61.06%), Postives = 80/113 (70.80%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  EI +AE EMPGLM+CRAEFG ++P KGA+ITGSLHMTIQTAVLIETL ALG EVRW SCNIFSTQDH               KGE+L++YW  T+K   W  GG  ++I
Sbjct:   17 FGRKEITIAETEMPGLMSCRAEFGDAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMI 129          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_STRAA (Adenosylhomocysteinase OS=Streptomyces argillaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.769e-33
Identity = 71/124 (57.26%), Postives = 82/124 (66.13%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW--GPGGGPDLI 458
            FG  EI LAE EMPGLM+ R E+  +QP  GA++TGSLHMT+QTAVLIETL ALG +VRW SCNIFSTQ H                       WKGETL+EYWWCTE+AL W   P GGP++I
Sbjct:   18 FGRKEITLAEHEMPGLMSIRREYAEAQPLAGARVTGSLHMTVQTAVLIETLVALGAQVRWASCNIFSTQGHAAAAIAVGPDGTPDNPRAVPVFAWKGETLEEYWWCTEQALTWPDSPTGGPNMI 141          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPS (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain BisB5) GN=ahcY PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.311e-33
Identity = 69/113 (61.06%), Postives = 79/113 (69.91%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETLTALG +VRW SCNI+STQDH               KGE+L++YW  T +  DW  GG P++I
Sbjct:   18 FGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLTALGADVRWVSCNIYSTQDHAAAAIAAAGIPVFAIKGESLEDYWDYTARMFDWHGGGTPNMI 130          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_CHLCH (Adenosylhomocysteinase OS=Chlorobium chlorochromatii (strain CaD3) GN=ahcY PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.311e-33
Identity = 68/113 (60.18%), Postives = 78/113 (69.03%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EIE+AE EMPGLMA R ++   +P KGA+I GSLHMTIQTAVLIETL  LG  VRW SCNIFSTQDH              WKGETL EYWWCT + L++  G GP+LI
Sbjct:   20 WGRKEIEIAEKEMPGLMALRKKYAGQKPLKGARIAGSLHMTIQTAVLIETLVDLGANVRWASCNIFSTQDHAAAAIAQAGVPVFAWKGETLDEYWWCTRQILEFDGGLGPNLI 132          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_CHLPD (Adenosylhomocysteinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=ahcY PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.018e-33
Identity = 67/113 (59.29%), Postives = 78/113 (69.03%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EI++AE EMPGLMA R ++   +P KGA+I GSLHMTIQTAVLIETL  LG +VRW SCNIFSTQDH              WKGETL EYWWCT + L++  G GP LI
Sbjct:   20 WGRKEIDIAEKEMPGLMATRKKYAGQKPLKGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAKAGIPVFAWKGETLDEYWWCTRQILEFEGGKGPHLI 132          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_CAUCR (Adenosylhomocysteinase OS=Caulobacter crescentus GN=ahcY PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.018e-33
Identity = 71/113 (62.83%), Postives = 77/113 (68.14%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  EI +AE EMPGLMA RAE+GP Q  KGA+I GSLHMTIQTAVLIETLTALG EVRW SCNIFSTQDH              +KGE L EYW    K  +W  GG P+LI
Sbjct:   14 FGRKEIAIAETEMPGLMATRAEYGPQQILKGARIAGSLHMTIQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAFKGENLVEYWEYAHKIFEWHDGGYPNLI 126          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_RHILW (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=ahcY PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.942e-33
Identity = 68/113 (60.18%), Postives = 79/113 (69.91%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  EI +AE EMPGLM+CR EFG ++P KGA+ITGSLHMTIQTAVLIETL ALG EVRW SCNIFSTQDH               KGE+L++YW  T+K   W  GG  ++I
Sbjct:   17 FGRKEITIAETEMPGLMSCRTEFGQAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMI 129          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_RHIL3 (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ahcY PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.942e-33
Identity = 68/113 (60.18%), Postives = 79/113 (69.91%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  EI +AE EMPGLM+CR EFG ++P KGA+ITGSLHMTIQTAVLIETL ALG EVRW SCNIFSTQDH               KGE+L++YW  T+K   W  GG  ++I
Sbjct:   17 FGRKEITIAETEMPGLMSCRTEFGQTKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMI 129          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_PROVI (Adenosylhomocysteinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=ahcY PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.942e-33
Identity = 66/113 (58.41%), Postives = 81/113 (71.68%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EI++AE EMPGLMA R ++   +P  G++I+GSLHMTIQTAVLIETL  LG +VRW SCNIFSTQDH              WKGE+L+EYWWCT + LD+G G GP+LI
Sbjct:   20 WGRKEIDIAEKEMPGLMAIRNKYKGQKPLAGSRISGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAVTGVPVFAWKGESLEEYWWCTRQILDFGNGLGPNLI 132          
The following BLAST results are available for this feature:
BLAST of FC920658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
SAHH_RHIEC1.355e-3361.06Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_RHIE61.355e-3361.06Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_STRAA1.769e-3357.26Adenosylhomocysteinase OS=Streptomyces argillaceus... [more]
SAHH_RHOPS2.311e-3361.06Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_CHLCH2.311e-3360.18Adenosylhomocysteinase OS=Chlorobium chlorochromat... [more]
SAHH_CHLPD3.018e-3359.29Adenosylhomocysteinase OS=Chlorobium phaeobacteroi... [more]
SAHH_CAUCR3.018e-3362.83Adenosylhomocysteinase OS=Caulobacter crescentus G... [more]
SAHH_RHILW3.942e-3360.18Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_RHIL33.942e-3360.18Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_PROVI3.942e-3358.41Adenosylhomocysteinase OS=Prosthecochloris vibriof... [more]

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Properties
Property NameValue
Genbank descriptionC32011D03EF RVDevelop1 Citrus clementina cDNA clone C32011D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920658 ID=FC920658; Name=FC920658; organism=Citrus clementina; type=EST; length=459bp
TCTCTTCCTTCTTTCTTATAGATGCATCAATACTATTAATCAACCATGGC
GTTTGCATTCGAGAAATCCGCTAGGCGGACTTGAATTCAAGGATGAAGGA
TCTGTGCACCAGGCTGACTTTCGGGCCACACGAAATCGAGTTGGCCGAAG
TCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAG
CCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGAC
AGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGACGAAGTCCGCTGGT
GCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCA
CGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTA
CTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAG
ATCTCATCG
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