FC920658

Overview
NameFC920658
Unique NameFC920658
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_PLACH (Adenosylhomocysteinase OS=Plasmodium chabaudi GN=PC000295.02.0 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.942e-33
Identity = 70/129 (54.26%), Postives = 88/129 (68.22%), Query Frame = 3
Query:   78 DLNSRMKDLCTRLTFGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDH-XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGG-GPDLI 458
            D  S++KDL +   FG  ++E++E EMPGLM  R E+   +P KGAKITG LHMTI+TA+L+ETL  LG ++RWCSCNI+ST D+               W+GETL+EYWWC EKAL WG  G GPDLI
Sbjct:    3 DSTSKIKDL-SLAPFGKLQMEISETEMPGLMTIREEYEKLKPLKGAKITGCLHMTIETALLMETLQKLGAKLRWCSCNIYSTLDYAAAAVSTLENVSVFAWRGETLEEYWWCVEKALTWGENGEGPDLI 130          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BRASB (Adenosylhomocysteinase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=ahcY PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.942e-33
Identity = 69/113 (61.06%), Postives = 77/113 (68.14%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETL ALG ++RW SCNI+STQDH               KGETL +YW  T K  DW  GG P++I
Sbjct:   20 FGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLAALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLADYWDYTAKLFDWHGGGHPNMI 132          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BRAJA (Adenosylhomocysteinase OS=Bradyrhizobium japonicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.942e-33
Identity = 69/113 (61.06%), Postives = 76/113 (67.26%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  E+ LAE EMPGLMA R EFGP QP KGA+I GSLHMTIQT VLIETL ALG ++RW SCNI+STQDH               KGETL EYW  T K  DW  GG P++I
Sbjct:   20 FGRKELSLAETEMPGLMATREEFGPKQPLKGARIAGSLHMTIQTGVLIETLAALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTAKLFDWHGGGHPNMI 132          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_METEP (Adenosylhomocysteinase OS=Methylobacterium extorquens (strain PA1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 5.148e-33
Identity = 69/113 (61.06%), Postives = 78/113 (69.03%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EI +AE EMPGLM+ RAE+G SQP KGAKI GSLHMTIQTAVLIETL ALG ++RW SCNI+STQDH               KGETL EYW  T K  DW  GG P++I
Sbjct:   17 YGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMI 129          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_METC4 (Adenosylhomocysteinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ahcY PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 5.148e-33
Identity = 69/113 (61.06%), Postives = 78/113 (69.03%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EI +AE EMPGLM+ RAE+G SQP KGAKI GSLHMTIQTAVLIETL ALG ++RW SCNI+STQDH               KGETL EYW  T K  DW  GG P++I
Sbjct:   17 YGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMI 129          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_SYNSC (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9605) GN=ahcY PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 6.723e-33
Identity = 67/113 (59.29%), Postives = 78/113 (69.03%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  E+++AE EMPGLMA R ++G  +P KGA+I GSLHMTIQTAVLIETL  LG EVRW SCNIFSTQDH               KGETL+EYW  T   L+WG GG P++I
Sbjct:   27 FGRKELDIAETEMPGLMALREKYGSEKPLKGARIAGSLHMTIQTAVLIETLVELGAEVRWASCNIFSTQDHAAAAIAAKGIPVFAVKGETLEEYWDYTHSILEWGDGGSPNMI 139          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_RHOP2 (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain HaA2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 8.781e-33
Identity = 68/113 (60.18%), Postives = 78/113 (69.03%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETL ALG +VRW SCNI+STQDH               KGE+L++YW  T +  DW  GG P++I
Sbjct:   18 FGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLVALGADVRWVSCNIYSTQDHAAAAIAAAGIPVFAIKGESLEDYWDYTARMFDWHGGGTPNMI 130          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBL (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ahcY PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 8.781e-33
Identity = 73/126 (57.94%), Postives = 86/126 (68.25%), Query Frame = 3
Query:   81 LNSRMKDLCTRLTFGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            LN ++KDL ++  +G  EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LG EVRW SCNIFSTQDH              WKGET +EYWWC E+ L +G   GP++I
Sbjct:   10 LNYKVKDL-SQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFSTQDHAAAAIAKAGVPVFAWKGETEEEYWWCIEQTLFFG-DKGPNMI 133          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBJ (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ahcY PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 8.781e-33
Identity = 73/126 (57.94%), Postives = 86/126 (68.25%), Query Frame = 3
Query:   81 LNSRMKDLCTRLTFGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            LN ++KDL ++  +G  EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LG EVRW SCNIFSTQDH              WKGET +EYWWC E+ L +G   GP++I
Sbjct:   10 LNYKVKDL-SQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFSTQDHAAAAIAKAGVPVFAWKGETEEEYWWCIEQTLFFG-DKGPNMI 133          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS3 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9311) GN=ahcY PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.147e-32
Identity = 67/113 (59.29%), Postives = 78/113 (69.03%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  E+ +AE EMPGLMA RA++G  +P KGA+I GSLHMTIQTAVLIETL  LG +VRW SCNIFSTQDH               KGETL+EYW  T   L+WG GG P++I
Sbjct:   27 FGRKELNIAETEMPGLMALRAKYGKDKPLKGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAMAAGGIPVFAVKGETLEEYWDYTHSILEWGDGGTPNMI 139          
The following BLAST results are available for this feature:
BLAST of FC920658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
SAHH_PLACH3.942e-3354.26Adenosylhomocysteinase OS=Plasmodium chabaudi GN=P... [more]
SAHH_BRASB3.942e-3361.06Adenosylhomocysteinase OS=Bradyrhizobium sp. (stra... [more]
SAHH_BRAJA3.942e-3361.06Adenosylhomocysteinase OS=Bradyrhizobium japonicum... [more]
SAHH_METEP5.148e-3361.06Adenosylhomocysteinase OS=Methylobacterium extorqu... [more]
SAHH_METC45.148e-3361.06Adenosylhomocysteinase OS=Methylobacterium chlorom... [more]
SAHH_SYNSC6.723e-3359.29Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_RHOP28.781e-3360.18Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_LEPBL8.781e-3357.94Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_LEPBJ8.781e-3357.94Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_SYNS31.147e-3259.29Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC32011D03EF RVDevelop1 Citrus clementina cDNA clone C32011D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920658 ID=FC920658; Name=FC920658; organism=Citrus clementina; type=EST; length=459bp
TCTCTTCCTTCTTTCTTATAGATGCATCAATACTATTAATCAACCATGGC
GTTTGCATTCGAGAAATCCGCTAGGCGGACTTGAATTCAAGGATGAAGGA
TCTGTGCACCAGGCTGACTTTCGGGCCACACGAAATCGAGTTGGCCGAAG
TCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAG
CCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGAC
AGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGACGAAGTCCGCTGGT
GCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCA
CGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTA
CTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAG
ATCTCATCG
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