FC920658

Overview
NameFC920658
Unique NameFC920658
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPX (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH8102) GN=ahcY PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.147e-32
Identity = 66/113 (58.41%), Postives = 78/113 (69.03%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  E+++AE EMPGLMA R ++G  +P KGA+I GSLHMTIQTA LIETL  LG EVRW SCNIFSTQDH               KGETL+EYW  T + L+WG GG P++I
Sbjct:   27 FGRKELDIAETEMPGLMALREKYGTEKPLKGARIAGSLHMTIQTACLIETLVELGAEVRWASCNIFSTQDHAAAAIAAQNIPVFAVKGETLEEYWEYTHRILEWGDGGSPNMI 139          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPW (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH7803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.147e-32
Identity = 66/113 (58.41%), Postives = 78/113 (69.03%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  E+++AE EMPGLMA R ++G  +P KGA+I GSLHMTIQTA LIETL  LG EVRW SCNIFSTQDH               KGETL+EYW  T + L+WG GG P++I
Sbjct:   27 FGRKELDIAETEMPGLMALREKYGTEKPLKGARIAGSLHMTIQTACLIETLVELGAEVRWASCNIFSTQDHAAAAMAARDIPVFAVKGETLEEYWEYTHRILEWGDGGSPNMI 139          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_RHOCA (Adenosylhomocysteinase OS=Rhodobacter capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.147e-32
Identity = 68/107 (63.55%), Postives = 76/107 (71.03%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPG 440
            FG  E+++AE EMPGLMACR EFGPSQP KGA+I GSLHMTIQTAVLIETL ALG +VRW SCNIFSTQDH               KGETL+EYW  T+K   +  G
Sbjct:   14 FGRKELDIAETEMPGLMACREEFGPSQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAVKGETLEEYWAYTDKIFQFPEG 120          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_METPB (Adenosylhomocysteinase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ahcY PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.147e-32
Identity = 69/113 (61.06%), Postives = 77/113 (68.14%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EI +AE EMPGLMA RAE+G SQP KGAKI GSLHMTIQTAVLIETL  LG ++RW SCNI+STQDH               KGETL EYW  T K  DW  GG P++I
Sbjct:   17 YGRKEISIAETEMPGLMATRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKHLGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMI 129          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_MESSB (Adenosylhomocysteinase OS=Mesorhizobium sp. (strain BNC1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.147e-32
Identity = 69/110 (62.73%), Postives = 78/110 (70.91%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            +G  EIE+AE EMPGLMACR EFG ++P KGA+ITGSLHMTIQTAVLIETL +LG EVRW SCNIFSTQDH               KGETL+EYW  T++   W P G P
Sbjct:   16 WGRKEIEIAETEMPGLMACREEFGEAKPLKGARITGSLHMTIQTAVLIETLKSLGAEVRWASCNIFSTQDHAAAAIAETGTPVFAVKGETLEEYWTYTDRIFQW-PDGQP 124          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIN (Adenosylhomocysteinase OS=Leptospira interrogans GN=ahcY PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.147e-32
Identity = 72/127 (56.69%), Postives = 87/127 (68.50%), Query Frame = 3
Query:   78 DLNSRMKDLCTRLTFGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            DL+ ++KDL ++  +G  EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LG EVRW SCNIFSTQDH              WKGET +EYWWC E+ + +G   GP++I
Sbjct:    9 DLSYKVKDL-SQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETEEEYWWCIEQTIFFG-DKGPNMI 133          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIC (Adenosylhomocysteinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ahcY PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.147e-32
Identity = 72/127 (56.69%), Postives = 87/127 (68.50%), Query Frame = 3
Query:   78 DLNSRMKDLCTRLTFGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            DL+ ++KDL ++  +G  EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LG EVRW SCNIFSTQDH              WKGET +EYWWC E+ + +G   GP++I
Sbjct:    9 DLSYKVKDL-SQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETEEEYWWCIEQTIFFG-DKGPNMI 133          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_CHLTE (Adenosylhomocysteinase OS=Chlorobium tepidum GN=ahcY PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.147e-32
Identity = 67/113 (59.29%), Postives = 78/113 (69.03%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EIE+AE EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL  LG +VRW SCNIFSTQDH              WKGETL EYWWCT + L++  G GP+LI
Sbjct:   20 WGRKEIEIAEKEMPGLMATRKKYEGKKPLAGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLDEYWWCTRQILEFEGGLGPNLI 132          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_CHLP8 (Adenosylhomocysteinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ahcY PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.147e-32
Identity = 67/113 (59.29%), Postives = 78/113 (69.03%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +G  EIE+AE EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL  LG +VRW SCNIFSTQDH              WKGETL EYWWCT + L++  G GP+LI
Sbjct:   20 WGRKEIEIAEKEMPGLMATRKKYEGKKPLAGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLDEYWWCTRQILEFEGGLGPNLI 132          
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS9 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9902) GN=ahcY PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.498e-32
Identity = 66/113 (58.41%), Postives = 79/113 (69.91%), Query Frame = 3
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            FG  E+++AE EMPGLMA RA++G  +P KGA+I GSLHMTIQTAVLIETL  LG +VRW SCNIFSTQDH               KGETL+EYW  T + L+W  GG P++I
Sbjct:   27 FGRKELDIAETEMPGLMALRAKYGNEKPLKGARIAGSLHMTIQTAVLIETLEELGADVRWASCNIFSTQDHAAAAIAANGTPVFAVKGETLEEYWAYTHRILEWSDGGAPNMI 139          
The following BLAST results are available for this feature:
BLAST of FC920658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
SAHH_SYNPX1.147e-3258.41Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_SYNPW1.147e-3258.41Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_RHOCA1.147e-3263.55Adenosylhomocysteinase OS=Rhodobacter capsulatus G... [more]
SAHH_METPB1.147e-3261.06Adenosylhomocysteinase OS=Methylobacterium populi ... [more]
SAHH_MESSB1.147e-3262.73Adenosylhomocysteinase OS=Mesorhizobium sp. (strai... [more]
SAHH_LEPIN1.147e-3256.69Adenosylhomocysteinase OS=Leptospira interrogans G... [more]
SAHH_LEPIC1.147e-3256.69Adenosylhomocysteinase OS=Leptospira interrogans s... [more]
SAHH_CHLTE1.147e-3259.29Adenosylhomocysteinase OS=Chlorobium tepidum GN=ah... [more]
SAHH_CHLP81.147e-3259.29Adenosylhomocysteinase OS=Chlorobaculum parvum (st... [more]
SAHH_SYNS91.498e-3258.41Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC32011D03EF RVDevelop1 Citrus clementina cDNA clone C32011D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920658 ID=FC920658; Name=FC920658; organism=Citrus clementina; type=EST; length=459bp
TCTCTTCCTTCTTTCTTATAGATGCATCAATACTATTAATCAACCATGGC
GTTTGCATTCGAGAAATCCGCTAGGCGGACTTGAATTCAAGGATGAAGGA
TCTGTGCACCAGGCTGACTTTCGGGCCACACGAAATCGAGTTGGCCGAAG
TCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAG
CCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGAC
AGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGACGAAGTCCGCTGGT
GCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCA
CGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTA
CTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAG
ATCTCATCG
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