FC920658

Overview
NameFC920658
Unique NameFC920658
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_MYCMM (Adenosylhomocysteinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ahcY PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.825e-31
Identity = 66/119 (55.46%), Postives = 76/119 (63.87%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            FG  E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALG EVRW SCNIFSTQDH                       WKGE+L+EYWWC E+ L W     P
Sbjct:   28 FGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGVPVFAWKGESLEEYWWCAEQMLTWPDSDKP 146
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BRUME (Adenosylhomocysteinase OS=Brucella melitensis GN=ahcY PE=3 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 2.825e-31
Identity = 67/110 (60.91%), Postives = 76/110 (69.09%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            +G  E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LG EVRW SCNIFSTQDH               KGETL+EYW  T++   W P G P
Sbjct:   17 WGRRELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQW-PDGEP 125
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BRUMB (Adenosylhomocysteinase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=ahcY PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.825e-31
Identity = 67/110 (60.91%), Postives = 76/110 (69.09%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            +G  E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LG EVRW SCNIFSTQDH               KGETL+EYW  T++   W P G P
Sbjct:   17 WGRRELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQW-PDGEP 125
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_MYCPA (Adenosylhomocysteinase OS=Mycobacterium paratuberculosis GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.689e-31
Identity = 66/115 (57.39%), Postives = 76/115 (66.09%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGP 437
            +G  +IEL+E EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETL ALG EVRW SCNIFSTQDH                       WKGETL+EYWW  E+AL W P
Sbjct:   28 YGRRDIELSEQEMPGLMSLRREYHDVQPLKGARISGSLHMTVQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPRGVPVFAWKGETLEEYWWAAEQALTWPP 142
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLE (Adenosylhomocysteinase OS=Mycobacterium leprae GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.689e-31
Identity = 66/113 (58.41%), Postives = 75/113 (66.37%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW 431
            FG  E++LAE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALG EVRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W
Sbjct:   28 FGRKELDLAEYEMPGLMSLRHEYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPYGTPEEPKGVPVFAWKGETLEEYWWAAEQMLTW 140
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLB (Adenosylhomocysteinase OS=Mycobacterium leprae (strain Br4923) GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.689e-31
Identity = 66/113 (58.41%), Postives = 75/113 (66.37%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW 431
            FG  E++LAE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALG EVRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W
Sbjct:   28 FGRKELDLAEYEMPGLMSLRHEYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPYGTPEEPKGVPVFAWKGETLEEYWWAAEQMLTW 140
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BRUSU (Adenosylhomocysteinase OS=Brucella suis GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.689e-31
Identity = 67/110 (60.91%), Postives = 76/110 (69.09%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            +G  E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LG EVRW SCNIFSTQDH               KGETL+EYW  T++   W P G P
Sbjct:   17 WGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQW-PDGEP 125
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BRUSI (Adenosylhomocysteinase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.689e-31
Identity = 67/110 (60.91%), Postives = 76/110 (69.09%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            +G  E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LG EVRW SCNIFSTQDH               KGETL+EYW  T++   W P G P
Sbjct:   17 WGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQW-PDGEP 125
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BRUO2 (Adenosylhomocysteinase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.689e-31
Identity = 67/110 (60.91%), Postives = 76/110 (69.09%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            +G  E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LG EVRW SCNIFSTQDH               KGETL+EYW  T++   W P G P
Sbjct:   17 WGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQW-PDGEP 125
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BRUC2 (Adenosylhomocysteinase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.689e-31
Identity = 67/110 (60.91%), Postives = 76/110 (69.09%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            +G  E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LG EVRW SCNIFSTQDH               KGETL+EYW  T++   W P G P
Sbjct:   17 WGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQW-PDGEP 125
The following BLAST results are available for this feature:
BLAST of FC920658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
SAHH_MYCMM2.825e-3155.46Adenosylhomocysteinase OS=Mycobacterium marinum (s... [more]
SAHH_BRUME2.825e-3160.91Adenosylhomocysteinase OS=Brucella melitensis GN=a... [more]
SAHH_BRUMB2.825e-3160.91Adenosylhomocysteinase OS=Brucella melitensis biot... [more]
SAHH_MYCPA3.689e-3157.39Adenosylhomocysteinase OS=Mycobacterium paratuberc... [more]
SAHH_MYCLE3.689e-3158.41Adenosylhomocysteinase OS=Mycobacterium leprae GN=... [more]
SAHH_MYCLB3.689e-3158.41Adenosylhomocysteinase OS=Mycobacterium leprae (st... [more]
SAHH_BRUSU3.689e-3160.91Adenosylhomocysteinase OS=Brucella suis GN=ahcY PE... [more]
SAHH_BRUSI3.689e-3160.91Adenosylhomocysteinase OS=Brucella suis (strain AT... [more]
SAHH_BRUO23.689e-3160.91Adenosylhomocysteinase OS=Brucella ovis (strain AT... [more]
SAHH_BRUC23.689e-3160.91Adenosylhomocysteinase OS=Brucella canis (strain A... [more]

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Properties
Property NameValue
Genbank descriptionC32011D03EF RVDevelop1 Citrus clementina cDNA clone C32011D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920658 ID=FC920658; Name=FC920658; organism=Citrus clementina; type=EST; length=459bp
TCTCTTCCTTCTTTCTTATAGATGCATCAATACTATTAATCAACCATGGC
GTTTGCATTCGAGAAATCCGCTAGGCGGACTTGAATTCAAGGATGAAGGA
TCTGTGCACCAGGCTGACTTTCGGGCCACACGAAATCGAGTTGGCCGAAG
TCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAG
CCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGAC
AGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGACGAAGTCCGCTGGT
GCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCA
CGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTA
CTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAG
ATCTCATCG
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