FC920658

Overview
NameFC920658
Unique NameFC920658
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length459
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BRUAB (Adenosylhomocysteinase OS=Brucella abortus GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.689e-31
Identity = 67/110 (60.91%), Postives = 76/110 (69.09%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            +G  E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LG EVRW SCNIFSTQDH               KGETL+EYW  T++   W P G P
Sbjct:   17 WGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQW-PDGEP 125
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BRUA2 (Adenosylhomocysteinase OS=Brucella abortus (strain 2308) GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.689e-31
Identity = 67/110 (60.91%), Postives = 76/110 (69.09%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            +G  E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LG EVRW SCNIFSTQDH               KGETL+EYW  T++   W P G P
Sbjct:   17 WGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQW-PDGEP 125
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_BRUA1 (Adenosylhomocysteinase OS=Brucella abortus (strain S19) GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.689e-31
Identity = 67/110 (60.91%), Postives = 76/110 (69.09%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP 449
            +G  E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LG EVRW SCNIFSTQDH               KGETL+EYW  T++   W P G P
Sbjct:   17 WGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQW-PDGEP 125
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_METPP (Adenosylhomocysteinase OS=Methylibium petroleiphilum (strain PM1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.818e-31
Identity = 68/117 (58.12%), Postives = 80/117 (68.38%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWG----PGGGPDLI 458
            +G  EI++AE EMPGLMA R EF  SQP KGA+ITGSLHMTIQTAVL+ETL ALG +VRW SCNIFSTQDH              +KGETL +YW  T +  D+G     G GP++I
Sbjct:   23 WGRKEIKIAETEMPGLMAIRQEFAASQPLKGARITGSLHMTIQTAVLVETLQALGAQVRWASCNIFSTQDHAAAALVAAGTPVFAYKGETLTDYWDYTHRIFDFGAKGTDGEGPNMI 139
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_ACIAC (Adenosylhomocysteinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.818e-31
Identity = 68/117 (58.12%), Postives = 81/117 (69.23%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWG----PGGGPDLI 458
            +G  EI++AE EMPGLMA R EF  +QP KGA+ITGSLHMTIQTAVLIETL ALG +VRW SCNIFSTQDH               KGE+L++YW  T +  D+G    PG GP++I
Sbjct:   21 WGRKEIKIAETEMPGLMAIREEFAAAQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAIKGESLEDYWDYTHRIFDFGAKGTPGEGPNMI 137
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_SOLUE (Adenosylhomocysteinase OS=Solibacter usitatus (strain Ellin6076) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 6.293e-31
Identity = 66/128 (51.56%), Postives = 82/128 (64.06%), Query Frame = 3 
Query:   75 ADLNSRMKDLCTRLTFGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLI 458
            +D   ++ DL +   +G  EI ++E EMPGLMA R ++   +P  G +ITGSLHMTIQTAVLIETL  LG  VRW SCNIFSTQDH              WKGE+L+EYWWCT +A+    G GP L+
Sbjct:    9 SDATFKVADL-SLAEWGRKEISVSEFEMPGLMAIRRKYAKEKPLAGVRITGSLHMTIQTAVLIETLVDLGASVRWASCNIFSTQDHAAAAIAKAGVPVFAWKGESLEEYWWCTLQAVTHPGGKGPQLV 135
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_NOVAD (Adenosylhomocysteinase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 8.219e-31
Identity = 67/105 (63.81%), Postives = 71/105 (67.62%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWG 434
            FG  EI +AE EMPGLMA R EFG SQP KGA+ITGSLHMTIQTAVLIETL ALG EVRW +CNIFSTQDH               KGE+L EYW       DWG
Sbjct:   21 FGRAEIRIAETEMPGLMALREEFGASQPLKGARITGSLHMTIQTAVLIETLVALGAEVRWATCNIFSTQDHAAAAIAAAGIPVFAVKGESLAEYWDYVGSIFDWG 125
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_DIAST (Adenosylhomocysteinase OS=Diaphorobacter sp. (strain TPSY) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 8.219e-31
Identity = 69/117 (58.97%), Postives = 78/117 (66.67%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGP----GGGPDLI 458
            +G  EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETL ALG +VRW SCNIFSTQDH               KGETL +YW  T +  D+GP    G GP++I
Sbjct:   21 WGRKEIRIAETEMPGLMAIREEFAAKQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLVDYWDYTHRIFDFGPKGSEGEGPNMI 137
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_ACISJ (Adenosylhomocysteinase OS=Acidovorax sp. (strain JS42) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 8.219e-31
Identity = 69/117 (58.97%), Postives = 78/117 (66.67%), Query Frame = 3 
Query:  120 FGPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGP----GGGPDLI 458
            +G  EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETL ALG +VRW SCNIFSTQDH               KGETL +YW  T +  D+GP    G GP++I
Sbjct:   21 WGRKEIRIAETEMPGLMAIREEFAAKQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLVDYWDYTHRIFDFGPKGSEGEGPNMI 137
[Close]
BLAST of FC920658 vs. ExPASy Swiss-Prot
Match: SAHH_CORGL (Adenosylhomocysteinase OS=Corynebacterium glutamicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.073e-30
Identity = 64/112 (57.14%), Postives = 71/112 (63.39%), Query Frame = 3 
Query:  123 GPHEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGDEVRWCSCNIFSTQDH--------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWG 434
            G H+I LAE EMPGLM  R EF   QP KGA+I GS+HMT+QTAVLIETLTALG EVRW SCNIFSTQD                       WKGE+L+EYWWC  +   WG
Sbjct:   14 GRHQIRLAEYEMPGLMQLRKEFADEQPLKGARIAGSIHMTVQTAVLIETLTALGAEVRWASCNIFSTQDEAAAAIVVGSGTVEEPAGVPVFAWKGESLEEYWWCINQIFSWG 125
The following BLAST results are available for this feature:
BLAST of FC920658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
SAHH_BRUAB3.689e-3160.91Adenosylhomocysteinase OS=Brucella abortus GN=ahcY... [more]
SAHH_BRUA23.689e-3160.91Adenosylhomocysteinase OS=Brucella abortus (strain... [more]
SAHH_BRUA13.689e-3160.91Adenosylhomocysteinase OS=Brucella abortus (strain... [more]
SAHH_METPP4.818e-3158.12Adenosylhomocysteinase OS=Methylibium petroleiphil... [more]
SAHH_ACIAC4.818e-3158.12Adenosylhomocysteinase OS=Acidovorax avenae subsp.... [more]
SAHH_SOLUE6.293e-3151.56Adenosylhomocysteinase OS=Solibacter usitatus (str... [more]
SAHH_NOVAD8.219e-3163.81Adenosylhomocysteinase OS=Novosphingobium aromatic... [more]
SAHH_DIAST8.219e-3158.97Adenosylhomocysteinase OS=Diaphorobacter sp. (stra... [more]
SAHH_ACISJ8.219e-3158.97Adenosylhomocysteinase OS=Acidovorax sp. (strain J... [more]
SAHH_CORGL1.073e-3057.14Adenosylhomocysteinase OS=Corynebacterium glutamic... [more]

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Properties
Property NameValue
Genbank descriptionC32011D03EF RVDevelop1 Citrus clementina cDNA clone C32011D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920658 ID=FC920658; Name=FC920658; organism=Citrus clementina; type=EST; length=459bp
TCTCTTCCTTCTTTCTTATAGATGCATCAATACTATTAATCAACCATGGC
GTTTGCATTCGAGAAATCCGCTAGGCGGACTTGAATTCAAGGATGAAGGA
TCTGTGCACCAGGCTGACTTTCGGGCCACACGAAATCGAGTTGGCCGAAG
TCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAG
CCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGAC
AGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGACGAAGTCCGCTGGT
GCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCA
CGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTA
CTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAG
ATCTCATCG
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