FC920659

Overview
NameFC920659
Unique NameFC920659
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14122 contig Ccv1_Contig14122:33..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.521e-36
Identity = 73/132 (55.30%), Postives = 93/132 (70.45%), Query Frame = 1
Query:  124 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPL 519
            ++LH + RVGDLDR+IKFY +  GM+LLR  + PE KY+ AFLG+   +S   +ELTYN+GV  Y+ GT +GH AI  +D+Y   E +RA GGNVTRE GPVKGG+T IAFV+DPDGY  E I+   T   L
Sbjct:    2 QILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIENKSTKSGL 133          

HSP 2 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 1
Query:  517 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTXLELNY 687
            +   MLRVGDL RSIKFY+  LGM+LLRT + PEYKYTLA LGY + +    +EL Y
Sbjct:    3 ILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTY 59          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMB (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup B GN=gloA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.811e-33
Identity = 62/125 (49.60%), Postives = 89/125 (71.20%), Query Frame = 1
Query:  124 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQR 498
            RLLH + RVG+L++++ FY    GMKLLR++D PE +++ AF+G+G E    V+ELT+N+    YD+G  +GH A+  +D Y+  E ++ +GGNV RE GP+K GTT IAFV+DPDGY  E IQ+
Sbjct:    2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQK 126          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMA (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup A GN=gloA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.811e-33
Identity = 62/125 (49.60%), Postives = 89/125 (71.20%), Query Frame = 1
Query:  124 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQR 498
            RLLH + RVG+L++++ FY    GMKLLR++D PE +++ AF+G+G E    V+ELT+N+    YD+G  +GH A+  +D Y+  E ++ +GGNV RE GP+K GTT IAFV+DPDGY  E IQ+
Sbjct:    2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQK 126          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_YEAST (Lactoylglutathione lyase OS=Saccharomyces cerevisiae GN=GLO1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23
Identity = 74/206 (35.92%), Postives = 99/206 (48.06%), Query Frame = 1
Query:  127 LLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE-------------QSHFVVELTYNYGV---TSYDIGT-------GFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELI---------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGY 648
            L H   RV D  RT+KFYTE FGMKLL ++D  E K+S  FL F  +              +H V+ELT+N+G      Y I         GFGH   +  D+ K  E + ++G    +     +G    IAF   PDGY  ELI          +G         M+R+ +  RS++FY+  LGMKLLRT +    K+TL  LGY
Sbjct:   23 LNHTCLRVKDPARTVKFYTEHFGMKLLSRKDFEEAKFSLYFLSFPKDDIPKNKNGEPDVFSAHGVLELTHNWGTEKNPDYKINNGNEEPHRGFGHICFSVSDINKTCEELESQGVKFKKRLS--EGRQKDIAFALGPDGYWIELITYSREGQEYPKGSVGNKFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGY 226          

HSP 2 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 46/139 (33.09%), Postives = 72/139 (51.80%), Query Frame = 1
Query:  133 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS------HFVVELTYNYGVTS-----YDIGT----GFGHFAIATEDVYKLVENIRAK-GGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRG 501
            H + R+ +  R+++FY    GMKLLR  +    K++  FLG+G  ++        V+ELT+N+G  +     Y  G     G+GH  I+ +D   L + I  K G  +   P   +G   +IAF+KDPDGY  E++  G
Sbjct:  185 HTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKTDSVFSCESVLELTHNWGTENDPNFHYHNGNSEPQGYGHICISCDDAGALCKEIEVKYGDKIQWSPKFNQGRMKNIAFLKDPDGYSIEVVPHG 323          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: GLOD4_RAT (Glyoxalase domain-containing protein 4 OS=Rattus norvegicus GN=Glod4 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 61/191 (31.94%), Postives = 96/191 (50.26%), Query Frame = 1
Query:  121 RRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPT-PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE 657
            RR LH V++VG+  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE  HFV ELTYNYG+  Y +G  F    +A+               N  R   P+      +   + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+    ++ ++    A+LGYA++
Sbjct:    4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGLTLASSQAV----------SNARRLEWPLSKVAEGVFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKKW----ALLGYADD 180          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_SCHPO (Lactoylglutathione lyase OS=Schizosaccharomyces pombe GN=glo1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20
Identity = 76/220 (34.55%), Postives = 109/220 (49.55%), Query Frame = 1
Query:  124 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF--------GPEQS--HFVVELTYNYGVTS-----YDIGT-----GFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQV--------MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE----DQTTXLELNY 687
            +L H + RV DLD+++KFYTE FGMKL+ +    E ++S +FL F        G E+S    ++ELTYN+G        Y  G      GFGH     +++      + +KG +  ++     G   HIAF  DPD Y  EL+ +  T +P   +        M+RV D   SI FYEK LGMK++   D P  K+T   L Y  +    D+   LEL +
Sbjct:   11 KLNHTMIRVKDLDKSLKFYTEVFGMKLIDQWVFEENEFSLSFLAFDGPGALNHGVERSKREGILELTYNFGTEKKEGPVYINGNTEPKRGFGHICFTVDNIESACAYLESKGVSFKKKLS--DGKMKHIAFALDPDNYWIELVSQSET-KPKANISNFRFNHTMVRVKDPEPSIAFYEK-LGMKVIDKADHPNGKFTNYFLAYPSDLPRHDREGLLELTH 226          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: GLOD4_MOUSE (Glyoxalase domain-containing protein 4 OS=Mus musculus GN=Glod4 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.257e-19
Identity = 64/199 (32.16%), Postives = 96/199 (48.24%), Query Frame = 1
Query:  121 RRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPT-PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTXLEL 681
            RR LH V++V +  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE  HFV ELTYNYG+  Y +G  F    +A+               N  +   P+      I   + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+    ++ +     A+LGYA  D    LEL
Sbjct:    4 RRALHFVFKVKNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGITLASSQAV----------SNARKLEWPLSKVAEGIFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKQ----RALLGYA--DNQCKLEL 186          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: GLOD4_CAEBR (Glyoxalase 1 OS=Caenorhabditis briggsae GN=glod-4 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.237e-19
Identity = 60/188 (31.91%), Postives = 97/188 (51.60%), Query Frame = 1
Query:  124 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-----------EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE 654
            R LH V++V +  +TI FYT+   MK+LR  +             +E++S   +G+G E  HFV+ELTYNY +  Y++G  +    I ++ ++  +  I  +           K G   +A VKDPDG+ F++ +    P+ L +V L VGDL +S K++ + LGM ++      E K T   L + E
Sbjct:    4 RALHYVFKVANRAKTIDFYTKILEMKVLRHEEFDKGCEASCNGPYDERWSKTMIGYGSEDEHFVLELTYNYPIHKYELGNDYRAIVIDSDQLFDKISRIDHR-----------KSGCGRLA-VKDPDGHEFKIGKADHAPKVL-RVQLNVGDLEKSKKYWNELLGMGIV------EEKKTRVRLSFGE 172          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: GLOD4_CAEEL (Glyoxalase 1 OS=Caenorhabditis elegans GN=glod-4 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.370e-18
Identity = 53/169 (31.36%), Postives = 92/169 (54.44%), Query Frame = 1
Query:  124 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 597
            R LH V++V +  +TI F+T    MK+LR  +  +            ++S   +G+G E  HFV+E+TYNY +  Y++G  +    I ++ +++ VE I  +           K G   +A VKDPDG+ F++ +   +P+ L +V + VGDL +S K++ + LGM ++
Sbjct:    4 RALHYVFKVANRAKTIDFFTNVLNMKVLRHEEFEKGCEATCNGPYNGRWSKTMIGYGSEDEHFVLEITYNYPIHKYELGNDYRAIVIDSDQLFEKVEKINHR-----------KSGCGRLA-VKDPDGHEFKIGKADQSPKVL-RVQVNVGDLEKSKKYWNETLGMPIV 159          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: GLOD4_HUMAN (Glyoxalase domain-containing protein 4 OS=Homo sapiens GN=GLOD4 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16
Identity = 68/214 (31.78%), Postives = 94/214 (43.93%), Query Frame = 1
Query:  121 RRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--------------------------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTXLEL 681
            RR LH V++VG+  +T +FY +  GMK+        E                          K+S   +GFGPE  HFV ELTYNYGV  Y +G  F    +A+               N  +   P+      +   + P GY F L  R  P  +P+ +V L V DL +S+ ++   LGMK+    +K E K   A+LGYA  D    LEL
Sbjct:    4 RRALHFVFKVGNRFQTARFYRDVLGMKVESCSVARLECSGAISAHCSDYTRITEDSFSKPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQAV----------SNARKLEWPLTEVAEGVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKI---YEKDEEKQR-ALLGYA--DNQCKLEL 201          
The following BLAST results are available for this feature:
BLAST of FC920659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
LGUL_HAEIN2.521e-3655.30Lactoylglutathione lyase OS=Haemophilus influenzae... [more]
LGUL_NEIMB5.811e-3349.60Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_NEIMA5.811e-3349.60Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_YEAST1.098e-2335.92Lactoylglutathione lyase OS=Saccharomyces cerevisi... [more]
GLOD4_RAT2.991e-2131.94Glyoxalase domain-containing protein 4 OS=Rattus n... [more]
LGUL_SCHPO1.137e-2034.55Lactoylglutathione lyase OS=Schizosaccharomyces po... [more]
GLOD4_MOUSE1.257e-1932.16Glyoxalase domain-containing protein 4 OS=Mus musc... [more]
GLOD4_CAEBR6.237e-1931.91Glyoxalase 1 OS=Caenorhabditis briggsae GN=glod-4 ... [more]
GLOD4_CAEEL2.370e-1831.36Glyoxalase 1 OS=Caenorhabditis elegans GN=glod-4 P... [more]
GLOD4_HUMAN1.301e-1631.78Glyoxalase domain-containing protein 4 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionC32011D04EF RVDevelop1 Citrus clementina cDNA clone C32011D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920659 ID=FC920659; Name=FC920659; organism=Citrus clementina; type=EST; length=688bp
GGATCATATCTCACACTTGCGACCTCACTCCGACTTTCTGAGTGATTCCA
TATCAAAATGGCTGAGGCTTCTCCTGCTGCTGCTAATGCCGAGTTGCTGG
AATGGCCAAAGAAAGATAAGCGACGCCTCCTTCATGCTGTGTATCGTGTT
GGTGATCTTGATCGCACCATCAAATTTTACACCGAATGCTTTGGGATGAA
GCTGTTGAGAAAGAGAGACGTCCCGGAAGAGAAATACTCAAATGCCTTTC
TTGGATTTGGCCCCGAACAGTCTCACTTTGTTGTGGAGTTAACGTACAAC
TATGGTGTAACTTCATATGATATTGGAACTGGTTTTGGCCATTTTGCAAT
TGCAACTGAAGATGTTTACAAACTGGTTGAAAACATTCGTGCCAAGGGTG
GCAATGTCACTAGAGAGCCTGGTCCAGTTAAAGGTGGAACAACTCACATT
GCCTTTGTGAAGGATCCCGATGGTTATATTTTTGAACTCATCCAGAGAGG
TCCAACTCCTGAACCACTCTGTCAAGTAATGCTTCGCGTTGGCGATCTTG
GTCGCTCCATCAAGTTCTATGAAAAGGCTTTGGGGATGAAACTGTTAAGG
ACAGTTGATAAACCTGAATACAAGTACACCCTGGCCATGCTTGGATATGC
TGAGGAAGATCAGACTACTGNTCTGGAGTTAAACTATA
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